RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 EMC7Q9NPA0 242 aa8.33□□□□□ -1.08
LIG1-209ENST00000596104 ARMCX1Q9P291 453 aa8.33□□□□□ -1.08
LIG1-209ENST00000596104 PRKDCP78527 4128 aaKnown RBP8.33□□□□□ -1.08
LIG1-209ENST00000596104 WNK1Q9H4A3 2382 aa8.32□□□□□ -1.08
LIG1-209ENST00000596104 A6NIZ1 184 aa8.32□□□□□ -1.08
LIG1-209ENST00000596104 SRRM5B3KS81 715 aa8.32□□□□□ -1.08
LIG1-209ENST00000596104 IFNL4K9M1U5 179 aa8.32□□□□□ -1.08
LIG1-209ENST00000596104 ANGPT2O15123 496 aa8.32□□□□□ -1.08
LIG1-209ENST00000596104 SGCEO43556 437 aa8.32□□□□□ -1.08
LIG1-209ENST00000596104 DOK2O60496 412 aa8.32□□□□□ -1.08
LIG1-209ENST00000596104 NDUFA7O95182 113 aa8.32□□□□□ -1.08
LIG1-209ENST00000596104 CYB5R3P00387 301 aaPredicted RBP8.32□□□□□ -1.08
LIG1-209ENST00000596104 RAC2P15153 192 aa8.32□□□□□ -1.08
LIG1-209ENST00000596104 FUT4P22083 530 aa8.32□□□□□ -1.08
LIG1-209ENST00000596104 GUCA1AP43080 201 aaPredicted RBP8.32□□□□□ -1.08
LIG1-209ENST00000596104 OR1E2P47887 323 aa8.32□□□□□ -1.08
LIG1-209ENST00000596104 RAG2P55895 527 aa8.32□□□□□ -1.08
LIG1-209ENST00000596104 RAP1BP61224 184 aa8.32□□□□□ -1.08
LIG1-209ENST00000596104 RAP1AP62834 184 aa8.32□□□□□ -1.08
LIG1-209ENST00000596104 GNB2P62879 340 aa8.32□□□□□ -1.08
LIG1-209ENST00000596104 SCRN3Q0VDG4 424 aa8.32□□□□□ -1.08
LIG1-209ENST00000596104 ZNF362Q5T0B9 420 aaPredicted RBP8.32□□□□□ -1.08
LIG1-209ENST00000596104 OLFML2AQ68BL7 652 aa8.32□□□□□ -1.08
LIG1-209ENST00000596104 SLC27A4Q6P1M0 643 aa8.32□□□□□ -1.08
LIG1-209ENST00000596104 BRD3OSQ6XYD6 125 aa8.32□□□□□ -1.08
LIG1-209ENST00000596104 VASH1Q7L8A9 365 aaPredicted RBP8.32□□□□□ -1.08
LIG1-209ENST00000596104 CALHM3Q86XJ0 350 aa8.32□□□□□ -1.08
LIG1-209ENST00000596104 FITM2Q8N6M3 262 aa8.32□□□□□ -1.08
LIG1-209ENST00000596104 OR10AD1Q8NGE0 317 aa8.32□□□□□ -1.08
LIG1-209ENST00000596104 OR10S1Q8NGN2 331 aa8.32□□□□□ -1.08
LIG1-209ENST00000596104 ZNF420Q8TAQ5 688 aaPredicted RBP8.32□□□□□ -1.08
LIG1-209ENST00000596104 LRRC8CQ8TDW0 803 aa8.32□□□□□ -1.08
LIG1-209ENST00000596104 TSPEARQ8WU66 669 aa8.32□□□□□ -1.08
LIG1-209ENST00000596104 SLC7A6Q92536 515 aa8.32□□□□□ -1.08
LIG1-209ENST00000596104 PTP4A1Q93096 173 aa8.32□□□□□ -1.08
LIG1-209ENST00000596104 BPIFA2Q96DR5 249 aa8.32□□□□□ -1.08
LIG1-209ENST00000596104 NEIL1Q96FI4 390 aaPredicted RBP8.32□□□□□ -1.08
LIG1-209ENST00000596104 TMEM246Q9BRR3 403 aa8.32□□□□□ -1.08
LIG1-209ENST00000596104 BEX1Q9HBH7 125 aa8.32□□□□□ -1.08
LIG1-209ENST00000596104 C1RLQ9NZP8 487 aa8.32□□□□□ -1.08
LIG1-209ENST00000596104 MIOXQ9UGB7 285 aa8.32□□□□□ -1.08
LIG1-209ENST00000596104 BAG5Q9UL15 447 aa8.32□□□□□ -1.08
LIG1-209ENST00000596104 TRAV27A0A087WT01 109 aa8.31□□□□□ -1.08
LIG1-209ENST00000596104 HTR3EA5X5Y0 456 aa8.31□□□□□ -1.08
LIG1-209ENST00000596104 OR6C6A6NF89 314 aa8.31□□□□□ -1.08
LIG1-209ENST00000596104 H7C1C5 153 aa8.31□□□□□ -1.08
LIG1-209ENST00000596104 J3QW42 95 aa8.31□□□□□ -1.08
LIG1-209ENST00000596104 FXYD1O00168 92 aa8.31□□□□□ -1.08
LIG1-209ENST00000596104 IFI30P13284 250 aa8.31□□□□□ -1.08
LIG1-209ENST00000596104 PMELP40967 661 aa8.31□□□□□ -1.08
LIG1-209ENST00000596104 KRTAP10-3P60369 221 aa8.31□□□□□ -1.08
LIG1-209ENST00000596104 LCN6P62502 163 aa8.31□□□□□ -1.08
LIG1-209ENST00000596104 GUCY1A3Q02108 690 aa8.31□□□□□ -1.08
LIG1-209ENST00000596104 ZNF181Q2M3W8 571 aa8.31□□□□□ -1.08
LIG1-209ENST00000596104 ZNF404Q494X3 552 aa8.31□□□□□ -1.08
LIG1-209ENST00000596104 RABL3Q5HYI8 236 aa8.31□□□□□ -1.08
LIG1-209ENST00000596104 FAM201AQ5SY85 155 aa8.31□□□□□ -1.08
LIG1-209ENST00000596104 FIP1L1Q6UN15 594 aaKnown RBP8.31□□□□□ -1.08
LIG1-209ENST00000596104 FBXW12Q6X9E4 464 aa8.31□□□□□ -1.08
LIG1-209ENST00000596104 Q6YL49 198 aa8.31□□□□□ -1.08
LIG1-209ENST00000596104 C17orf107Q6ZR85 190 aa8.31□□□□□ -1.08
LIG1-209ENST00000596104 MICU2Q8IYU8 434 aa8.31□□□□□ -1.08
LIG1-209ENST00000596104 OR5AS1Q8N127 324 aa8.31□□□□□ -1.08
LIG1-209ENST00000596104 ATG16L2Q8NAA4 619 aa8.31□□□□□ -1.08
LIG1-209ENST00000596104 OR8G5Q8NG78 346 aa8.31□□□□□ -1.08
LIG1-209ENST00000596104 OR51A7Q8NH64 312 aa8.31□□□□□ -1.08
LIG1-209ENST00000596104 ZDHHC16Q969W1 377 aa8.31□□□□□ -1.08
LIG1-209ENST00000596104 PLEKHA8Q96JA3 519 aa8.31□□□□□ -1.08
LIG1-209ENST00000596104 COG8Q96MW5 612 aa8.31□□□□□ -1.08
LIG1-209ENST00000596104 NUDT16L1Q9BRJ7 211 aaKnown RBP8.31□□□□□ -1.08
LIG1-209ENST00000596104 CDADC1Q9BWV3 514 aa8.31□□□□□ -1.08
LIG1-209ENST00000596104 CHIAQ9BZP6 476 aa8.31□□□□□ -1.08
LIG1-209ENST00000596104 MMP27Q9H306 513 aa8.31□□□□□ -1.08
LIG1-209ENST00000596104 MARCH7Q9H992 704 aa8.31□□□□□ -1.08
LIG1-209ENST00000596104 NOX4Q9NPH5 578 aa8.31□□□□□ -1.08
LIG1-209ENST00000596104 A4GNTQ9UNA3 340 aa8.31□□□□□ -1.08
LIG1-209ENST00000596104 IGHV3-64DA0A0J9YX35 117 aa8.3□□□□□ -1.08
LIG1-209ENST00000596104 A0A1B0GWJ7 208 aa8.3□□□□□ -1.08
LIG1-209ENST00000596104 CLPSL1A2RUU4 121 aa8.3□□□□□ -1.08
LIG1-209ENST00000596104 C22orf46C9J442 243 aa8.3□□□□□ -1.08
LIG1-209ENST00000596104 H0YL77 283 aa8.3□□□□□ -1.08
LIG1-209ENST00000596104 FBP2O00757 339 aa8.3□□□□□ -1.08
LIG1-209ENST00000596104 MLNRO43193 412 aa8.3□□□□□ -1.08
LIG1-209ENST00000596104 DBHP09172 617 aa8.3□□□□□ -1.08
LIG1-209ENST00000596104 CTLA4P16410 223 aa8.3□□□□□ -1.08
LIG1-209ENST00000596104 ZNF26P17031 533 aaPredicted RBP8.3□□□□□ -1.08
LIG1-209ENST00000596104 PITPNBP48739 271 aa8.3□□□□□ -1.08
LIG1-209ENST00000596104 BPIFB3P59826 476 aa8.3□□□□□ -1.08
LIG1-209ENST00000596104 FGF12P61328 243 aa8.3□□□□□ -1.08
LIG1-209ENST00000596104 ST3GAL3Q11203 375 aa8.3□□□□□ -1.08
LIG1-209ENST00000596104 AQP6Q13520 282 aa8.3□□□□□ -1.08
LIG1-209ENST00000596104 HLXQ14774 488 aaPredicted RBP8.3□□□□□ -1.08
LIG1-209ENST00000596104 CCDC92Q53HC0 331 aaPredicted RBP8.3□□□□□ -1.08
LIG1-209ENST00000596104 OTPQ5XKR4 325 aa8.3□□□□□ -1.08
LIG1-209ENST00000596104 WDR25Q64LD2 544 aaPredicted RBP8.3□□□□□ -1.08
LIG1-209ENST00000596104 OR2T2Q6IF00 324 aa8.3□□□□□ -1.08
LIG1-209ENST00000596104 NANOGP8Q6NSW7 305 aa8.3□□□□□ -1.08
LIG1-209ENST00000596104 C1orf94Q6P1W5 598 aa8.3□□□□□ -1.08
LIG1-209ENST00000596104 BRICD5Q6PL45 260 aa8.3□□□□□ -1.08
LIG1-209ENST00000596104 LYPD2Q6UXB3 125 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms