RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 TRIM36Q9NQ86 728 aa11.47□□□□□ -0.57
SHKBP1-209ENST00000595803 SLCO1C1Q9NYB5 712 aa11.47□□□□□ -0.57
SHKBP1-209ENST00000595803 GDF2Q9UK05 429 aaPredicted RBP11.47□□□□□ -0.57
SHKBP1-209ENST00000595803 ITGB1BP2Q9UKP3 347 aa11.47□□□□□ -0.57
SHKBP1-209ENST00000595803 CCRL2O00421 344 aa11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 NOL3O60936 208 aaKnown RBP11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 ZNF254O75437 659 aa11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 TOXO94900 526 aa11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 CNOT4O95628 575 aaKnown RBP11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 H2BFMP0C1H6 154 aa11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 PSKH1P11801 424 aa11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 CPEP16870 476 aa11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 CTSSP25774 331 aa11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 CEACAM8P31997 349 aaPredicted RBP11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 LIPAP38571 399 aa11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 RGS6P49758 472 aa11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 RIDAP52758 137 aaKnown RBP11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 PCBD1P61457 104 aa11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 BDH1Q02338 343 aa11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 PMPCAQ10713 525 aa11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 TPBGQ13641 420 aa11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 ENDOGQ14249 297 aaKnown RBP11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 NRN1LQ496H8 165 aa11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 ZNF684Q5T5D7 378 aa11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 VWA1Q6PCB0 445 aa11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 DEGS2Q6QHC5 323 aa11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 TFAP2EQ6VUC0 442 aa11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 SPATC1Q76KD6 591 aa11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 SLC16A14Q7RTX9 510 aa11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 BTLAQ7Z6A9 289 aa11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 ZNF679Q8IYX0 411 aa11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 DGCR14Q96DF8 476 aaKnown RBP11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 SLAMF6Q96DU3 332 aa11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 YIPF6Q96EC8 236 aa11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 OPALINQ96PE5 141 aa11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 AMELYQ99218 206 aa11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 SH3GL3Q99963 347 aa11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 WACQ9BTA9 647 aa11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 RNF121Q9H920 327 aa11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 ASH2LQ9UBL3 628 aa11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 MRM2Q9UI43 246 aaKnown RBP11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 SH3BGRL2Q9UJC5 107 aa11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 TINAGQ9UJW2 476 aa11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 LHFPL6Q9Y693 200 aa11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 CEPT1Q9Y6K0 416 aa11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 PHF3Q92576 2039 aaKnown RBP11.46□□□□□ -0.57
SHKBP1-209ENST00000595803 SVILO95425 2214 aa11.45□□□□□ -0.58
SHKBP1-209ENST00000595803 ANKHD1Q8IWZ3 2542 aaKnown RBP11.45□□□□□ -0.58
SHKBP1-209ENST00000595803 TRGV8A0A0C4DH27 118 aa11.45□□□□□ -0.58
SHKBP1-209ENST00000595803 HSPB2A8KAH6 182 aa11.45□□□□□ -0.58
SHKBP1-209ENST00000595803 TNFSF13O75888 250 aa11.45□□□□□ -0.58
SHKBP1-209ENST00000595803 RPP14O95059 124 aaKnown RBP11.45□□□□□ -0.58
SHKBP1-209ENST00000595803 B4GALT1P15291 398 aa11.45□□□□□ -0.58
SHKBP1-209ENST00000595803 PSMB10P40306 273 aa11.45□□□□□ -0.58
SHKBP1-209ENST00000595803 GTF2A1P52655 376 aaPredicted RBP11.45□□□□□ -0.58
SHKBP1-209ENST00000595803 SH3BGRP55822 239 aaPredicted RBP11.45□□□□□ -0.58
SHKBP1-209ENST00000595803 TGFBR3Q03167 851 aa11.45□□□□□ -0.58
SHKBP1-209ENST00000595803 ROM1Q03395 351 aa11.45□□□□□ -0.58
SHKBP1-209ENST00000595803 AQP6Q13520 282 aa11.45□□□□□ -0.58
SHKBP1-209ENST00000595803 GPR50Q13585 617 aa11.45□□□□□ -0.58
SHKBP1-209ENST00000595803 HSPB2Q16082 182 aa11.45□□□□□ -0.58
SHKBP1-209ENST00000595803 LIPNQ5VXI9 398 aa11.45□□□□□ -0.58
SHKBP1-209ENST00000595803 ZNF544Q6NX49 715 aa11.45□□□□□ -0.58
SHKBP1-209ENST00000595803 RPL22L1Q6P5R6 122 aaKnown RBP11.45□□□□□ -0.58
SHKBP1-209ENST00000595803 KLHL24Q6TFL4 600 aa11.45□□□□□ -0.58
SHKBP1-209ENST00000595803 LRRN1Q6UXK5 716 aa11.45□□□□□ -0.58
SHKBP1-209ENST00000595803 SYT9Q86SS6 491 aa11.45□□□□□ -0.58
SHKBP1-209ENST00000595803 SKA3Q8IX90 412 aa11.45□□□□□ -0.58
SHKBP1-209ENST00000595803 RPRMLQ8N4K4 120 aa11.45□□□□□ -0.58
SHKBP1-209ENST00000595803 ZFP41Q8N8Y5 198 aa11.45□□□□□ -0.58
SHKBP1-209ENST00000595803 ZNF610Q8N9Z0 462 aa11.45□□□□□ -0.58
SHKBP1-209ENST00000595803 ST7LQ8TDW4 575 aa11.45□□□□□ -0.58
SHKBP1-209ENST00000595803 STARD4Q96DR4 205 aa11.45□□□□□ -0.58
SHKBP1-209ENST00000595803 PELI1Q96FA3 418 aa11.45□□□□□ -0.58
SHKBP1-209ENST00000595803 MAP6Q96JE9 813 aa11.45□□□□□ -0.58
SHKBP1-209ENST00000595803 FUNDC2Q9BWH2 189 aa11.45□□□□□ -0.58
SHKBP1-209ENST00000595803 SFXN3Q9BWM7 321 aa11.45□□□□□ -0.58
SHKBP1-209ENST00000595803 MALT1Q9UDY8 824 aa11.45□□□□□ -0.58
SHKBP1-209ENST00000595803 TIMM10BQ9Y5J6 103 aa11.45□□□□□ -0.58
SHKBP1-209ENST00000595803 MED12LQ86YW9 2145 aa11.45□□□□□ -0.58
SHKBP1-209ENST00000595803 DCHS2Q6V1P9 2916 aa11.45□□□□□ -0.58
SHKBP1-209ENST00000595803 A0A096LPE4 126 aa11.44□□□□□ -0.58
SHKBP1-209ENST00000595803 PNMA8CA0A1B0GUJ8 204 aa11.44□□□□□ -0.58
SHKBP1-209ENST00000595803 A0A1W2PPZ6 126 aa11.44□□□□□ -0.58
SHKBP1-209ENST00000595803 CIB4A0PJX0 185 aa11.44□□□□□ -0.58
SHKBP1-209ENST00000595803 PRR32B1ATL7 298 aa11.44□□□□□ -0.58
SHKBP1-209ENST00000595803 E9PI62 339 aa11.44□□□□□ -0.58
SHKBP1-209ENST00000595803 RER1O15258 196 aa11.44□□□□□ -0.58
SHKBP1-209ENST00000595803 OGG1O15527 345 aa11.44□□□□□ -0.58
SHKBP1-209ENST00000595803 LALBAP00709 142 aa11.44□□□□□ -0.58
SHKBP1-209ENST00000595803 CELP19835 753 aa11.44□□□□□ -0.58
SHKBP1-209ENST00000595803 OPRM1P35372 400 aa11.44□□□□□ -0.58
SHKBP1-209ENST00000595803 FOXG1P55316 489 aaPredicted RBP11.44□□□□□ -0.58
SHKBP1-209ENST00000595803 SLC3A1Q07837 685 aa11.44□□□□□ -0.58
SHKBP1-209ENST00000595803 SCRN3Q0VDG4 424 aa11.44□□□□□ -0.58
SHKBP1-209ENST00000595803 DOC2BQ14184 412 aa11.44□□□□□ -0.58
SHKBP1-209ENST00000595803 SLC36A2Q495M3 483 aa11.44□□□□□ -0.58
SHKBP1-209ENST00000595803 CCDC58Q4VC31 144 aa11.44□□□□□ -0.58
SHKBP1-209ENST00000595803 LIPKQ5VXJ0 399 aa11.44□□□□□ -0.58
SHKBP1-209ENST00000595803 ANKRD16Q6P6B7 361 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms