RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 AQP2P41181 271 aa11.5□□□□□ -0.57
SHKBP1-208ENST00000595726 LOXL3P58215 753 aa11.5□□□□□ -0.57
SHKBP1-208ENST00000595726 TRAM2Q15035 370 aa11.5□□□□□ -0.57
SHKBP1-208ENST00000595726 PDCD1Q15116 288 aa11.5□□□□□ -0.57
SHKBP1-208ENST00000595726 ZMYND11Q15326 602 aa11.5□□□□□ -0.57
SHKBP1-208ENST00000595726 ESCO2Q56NI9 601 aa11.5□□□□□ -0.57
SHKBP1-208ENST00000595726 RUSC1-AS1Q66K80 236 aa11.5□□□□□ -0.57
SHKBP1-208ENST00000595726 ZNF620Q6ZNG0 422 aa11.5□□□□□ -0.57
SHKBP1-208ENST00000595726 SPICQ8N5J4 248 aa11.5□□□□□ -0.57
SHKBP1-208ENST00000595726 FAM86B1Q8N7N1 296 aa11.5□□□□□ -0.57
SHKBP1-208ENST00000595726 NOXO1Q8NFA2 376 aa11.5□□□□□ -0.57
SHKBP1-208ENST00000595726 MOSPD2Q8NHP6 518 aa11.5□□□□□ -0.57
SHKBP1-208ENST00000595726 IPCEF1Q8WWN9 437 aaPredicted RBP11.5□□□□□ -0.57
SHKBP1-208ENST00000595726 ASB10Q8WXI3 467 aa11.5□□□□□ -0.57
SHKBP1-208ENST00000595726 BPIFA2Q96DR5 249 aa11.5□□□□□ -0.57
SHKBP1-208ENST00000595726 FNDC11Q9BVV2 318 aa11.5□□□□□ -0.57
SHKBP1-208ENST00000595726 BCL2L14Q9BZR8 327 aa11.5□□□□□ -0.57
SHKBP1-208ENST00000595726 EGLN1Q9GZT9 426 aa11.5□□□□□ -0.57
SHKBP1-208ENST00000595726 INIPQ9NRY2 104 aa11.5□□□□□ -0.57
SHKBP1-208ENST00000595726 DCAF13Q9NV06 445 aaKnown RBP11.5□□□□□ -0.57
SHKBP1-208ENST00000595726 HIF3AQ9Y2N7 669 aa11.5□□□□□ -0.57
SHKBP1-208ENST00000595726 A0A087WUU8 490 aa11.49□□□□□ -0.57
SHKBP1-208ENST00000595726 A0A1W2PRG6 482 aa11.49□□□□□ -0.57
SHKBP1-208ENST00000595726 PLSCR5A0PG75 271 aa11.49□□□□□ -0.57
SHKBP1-208ENST00000595726 HTR3EA5X5Y0 456 aa11.49□□□□□ -0.57
SHKBP1-208ENST00000595726 NPIPB13A6NJU9 1138 aa11.49□□□□□ -0.57
SHKBP1-208ENST00000595726 NPIPB4C9JG80 1138 aa11.49□□□□□ -0.57
SHKBP1-208ENST00000595726 MCIDASD6RGH6 385 aa11.49□□□□□ -0.57
SHKBP1-208ENST00000595726 F5H0A9 414 aaPredicted RBP11.49□□□□□ -0.57
SHKBP1-208ENST00000595726 IGHG1P01857 330 aa11.49□□□□□ -0.57
SHKBP1-208ENST00000595726 MELTFP08582 738 aa11.49□□□□□ -0.57
SHKBP1-208ENST00000595726 CSF1P09603 554 aa11.49□□□□□ -0.57
SHKBP1-208ENST00000595726 HSD17B1P14061 328 aa11.49□□□□□ -0.57
SHKBP1-208ENST00000595726 CCNOP22674 350 aa11.49□□□□□ -0.57
SHKBP1-208ENST00000595726 DAP3P51398 398 aaKnown RBP11.49□□□□□ -0.57
SHKBP1-208ENST00000595726 HIST3H3Q16695 136 aa11.49□□□□□ -0.57
SHKBP1-208ENST00000595726 TBC1D28Q2M2D7 210 aa11.49□□□□□ -0.57
SHKBP1-208ENST00000595726 C2orf68Q2NKX9 166 aa11.49□□□□□ -0.57
SHKBP1-208ENST00000595726 NRMQ8IXM6 262 aa11.49□□□□□ -0.57
SHKBP1-208ENST00000595726 ACOT11Q8WXI4 607 aaPredicted RBP11.49□□□□□ -0.57
SHKBP1-208ENST00000595726 SEPHS2Q99611 448 aa11.49□□□□□ -0.57
SHKBP1-208ENST00000595726 MRPL13Q9BYD1 178 aaKnown RBP11.49□□□□□ -0.57
SHKBP1-208ENST00000595726 GORASP2Q9H8Y8 452 aa11.49□□□□□ -0.57
SHKBP1-208ENST00000595726 MSL2Q9HCI7 577 aa11.49□□□□□ -0.57
SHKBP1-208ENST00000595726 TMEM106BQ9NUM4 274 aa11.49□□□□□ -0.57
SHKBP1-208ENST00000595726 CD300AQ9UGN4 299 aa11.49□□□□□ -0.57
SHKBP1-208ENST00000595726 SAMD4AQ9UPU9 718 aaKnown RBP11.49□□□□□ -0.57
SHKBP1-208ENST00000595726 ENPP4Q9Y6X5 453 aa11.49□□□□□ -0.57
SHKBP1-208ENST00000595726 CENPBD1B2RD01 187 aa11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 DHHO43323 396 aa11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 SNAP29O95721 258 aa11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 FAM107AO95990 144 aa11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 WNT2P09544 360 aa11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 PPIAL4GP0DN37 164 aa11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 CLRN1P58418 232 aa11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 PRKCDQ05655 676 aa11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 LAPTM4AQ15012 233 aa11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 TMEM155Q4W5P6 130 aa11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 ALG10Q5BKT4 473 aa11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 SAMD4BQ5PRF9 694 aaKnown RBP11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 ARMC4Q5T2S8 1044 aa11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 C11orf87Q6NUJ2 197 aa11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 LRFN4Q6PJG9 635 aa11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 C16orf89Q6UX73 402 aa11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 ZNF730Q6ZMV8 503 aa11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 MBOAT2Q6ZWT7 520 aa11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 HDDC2Q7Z4H3 204 aa11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 REC114Q7Z4M0 266 aa11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 CYP4Z1Q86W10 505 aa11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 ZNF101Q8IZC7 436 aa11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 RNF113BQ8IZP6 322 aaKnown RBP11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 FITM2Q8N6M3 262 aa11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 CPEB3Q8NE35 698 aaKnown RBP11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 OR4K5Q8NGD3 323 aa11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 MARS2Q96GW9 593 aaKnown RBP11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 C7orf34Q96L11 122 aa11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 ZNF347Q96SE7 839 aa11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 CDRT15Q96T59 188 aa11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 RASSF4Q9H2L5 321 aa11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 ANKRD19PQ9H560 264 aa11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 NMNAT1Q9HAN9 279 aaPredicted RBP11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 NOX4Q9NPH5 578 aa11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 TMEM38BQ9NVV0 291 aa11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 NDUFAF4Q9P032 175 aa11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 MAGEL2Q9UJ55 1249 aa11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 KLHL21Q9UJP4 597 aa11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 BIRC6Q9NR09 4857 aa11.48□□□□□ -0.57
SHKBP1-208ENST00000595726 TRAV27A0A087WT01 109 aa11.47□□□□□ -0.57
SHKBP1-208ENST00000595726 IGHV2-70DA0A0C4DH43 119 aa11.47□□□□□ -0.57
SHKBP1-208ENST00000595726 C5orf63A6NC05 138 aa11.47□□□□□ -0.57
SHKBP1-208ENST00000595726 CDC42EP2O14613 210 aa11.47□□□□□ -0.57
SHKBP1-208ENST00000595726 ARPC2O15144 300 aa11.47□□□□□ -0.57
SHKBP1-208ENST00000595726 GPR137BO60478 399 aa11.47□□□□□ -0.57
SHKBP1-208ENST00000595726 GMNNO75496 209 aa11.47□□□□□ -0.57
SHKBP1-208ENST00000595726 TRMUO75648 421 aaKnown RBP11.47□□□□□ -0.57
SHKBP1-208ENST00000595726 ZNF205O95201 554 aa11.47□□□□□ -0.57
SHKBP1-208ENST00000595726 SEMG1P04279 462 aa11.47□□□□□ -0.57
SHKBP1-208ENST00000595726 QDPRP09417 244 aa11.47□□□□□ -0.57
SHKBP1-208ENST00000595726 ACADSP16219 412 aa11.47□□□□□ -0.57
SHKBP1-208ENST00000595726 MSX2P35548 267 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms