RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 RPS6KA6Q9UK32 745 aa14.4□□□□□ -0.1
CCDC9-202ENST00000595659 PCDHB10Q9UN67 800 aa14.4□□□□□ -0.1
CCDC9-202ENST00000595659 A0A0A6YYJ9 748 aa14.39□□□□□ -0.11
CCDC9-202ENST00000595659 A0A1W2PRQ8 180 aa14.39□□□□□ -0.11
CCDC9-202ENST00000595659 UNC119BA6NIH7 251 aa14.39□□□□□ -0.11
CCDC9-202ENST00000595659 RER1O15258 196 aa14.39□□□□□ -0.11
CCDC9-202ENST00000595659 AHCYL1O43865 530 aa14.39□□□□□ -0.11
CCDC9-202ENST00000595659 CD55P08174 381 aa14.39□□□□□ -0.11
CCDC9-202ENST00000595659 ZFP36P26651 326 aaKnown RBP14.39□□□□□ -0.11
CCDC9-202ENST00000595659 CDKN2AP42771 156 aaKnown RBP14.39□□□□□ -0.11
CCDC9-202ENST00000595659 LIMS1P48059 325 aa14.39□□□□□ -0.11
CCDC9-202ENST00000595659 SLC3A1Q07837 685 aa14.39□□□□□ -0.11
CCDC9-202ENST00000595659 DGCR6Q14129 220 aa14.39□□□□□ -0.11
CCDC9-202ENST00000595659 HLXQ14774 488 aaPredicted RBP14.39□□□□□ -0.11
CCDC9-202ENST00000595659 MEP1BQ16820 701 aa14.39□□□□□ -0.11
CCDC9-202ENST00000595659 CCDC92Q53HC0 331 aaPredicted RBP14.39□□□□□ -0.11
CCDC9-202ENST00000595659 ZMAT1Q5H9K5 638 aa14.39□□□□□ -0.11
CCDC9-202ENST00000595659 ZER1Q7Z7L7 766 aa14.39□□□□□ -0.11
CCDC9-202ENST00000595659 OR1F12Q8NHA8 337 aa14.39□□□□□ -0.11
CCDC9-202ENST00000595659 C22orf15Q8WYQ4 148 aa14.39□□□□□ -0.11
CCDC9-202ENST00000595659 C7orf34Q96L11 122 aa14.39□□□□□ -0.11
CCDC9-202ENST00000595659 DIRC2Q96SL1 478 aa14.39□□□□□ -0.11
CCDC9-202ENST00000595659 NDEL1Q9GZM8 345 aa14.39□□□□□ -0.11
CCDC9-202ENST00000595659 NUAK2Q9H093 628 aa14.39□□□□□ -0.11
CCDC9-202ENST00000595659 FAM107BQ9H098 131 aa14.39□□□□□ -0.11
CCDC9-202ENST00000595659 C7orf69Q9H7B7 122 aa14.39□□□□□ -0.11
CCDC9-202ENST00000595659 NRIP3Q9NQ35 241 aa14.39□□□□□ -0.11
CCDC9-202ENST00000595659 TMEM106BQ9NUM4 274 aa14.39□□□□□ -0.11
CCDC9-202ENST00000595659 ABCD2Q9UBJ2 740 aa14.39□□□□□ -0.11
CCDC9-202ENST00000595659 CGGBP1Q9UFW8 167 aaPredicted RBP14.39□□□□□ -0.11
CCDC9-202ENST00000595659 AURKCQ9UQB9 309 aa14.39□□□□□ -0.11
CCDC9-202ENST00000595659 NPTNQ9Y639 398 aa14.39□□□□□ -0.11
CCDC9-202ENST00000595659 PPP1R3DO95685 299 aa14.38□□□□□ -0.11
CCDC9-202ENST00000595659 RHCEP18577 417 aa14.38□□□□□ -0.11
CCDC9-202ENST00000595659 ACTG1P63261 375 aa14.38□□□□□ -0.11
CCDC9-202ENST00000595659 SCGB2A2Q13296 93 aa14.38□□□□□ -0.11
CCDC9-202ENST00000595659 AQP6Q13520 282 aa14.38□□□□□ -0.11
CCDC9-202ENST00000595659 GPR139Q6DWJ6 353 aa14.38□□□□□ -0.11
CCDC9-202ENST00000595659 C1QL2Q7Z5L3 287 aa14.38□□□□□ -0.11
CCDC9-202ENST00000595659 NPEPL1Q8NDH3 523 aa14.38□□□□□ -0.11
CCDC9-202ENST00000595659 ST7LQ8TDW4 575 aa14.38□□□□□ -0.11
CCDC9-202ENST00000595659 ITLN1Q8WWA0 313 aa14.38□□□□□ -0.11
CCDC9-202ENST00000595659 HAVCR1Q96D42 359 aa14.38□□□□□ -0.11
CCDC9-202ENST00000595659 SLC6A7Q99884 636 aa14.38□□□□□ -0.11
CCDC9-202ENST00000595659 MYLK2Q9H1R3 596 aa14.38□□□□□ -0.11
CCDC9-202ENST00000595659 DCAF13Q9NV06 445 aaKnown RBP14.38□□□□□ -0.11
CCDC9-202ENST00000595659 PTTG3PQ9NZH4 202 aa14.38□□□□□ -0.11
CCDC9-202ENST00000595659 VSX1Q9NZR4 365 aaPredicted RBP14.38□□□□□ -0.11
CCDC9-202ENST00000595659 OPN4Q9UHM6 478 aa14.38□□□□□ -0.11
CCDC9-202ENST00000595659 POLR1DQ9Y2S0 133 aa14.38□□□□□ -0.11
CCDC9-202ENST00000595659 IGHV3-64DA0A0J9YX35 117 aa14.37□□□□□ -0.11
CCDC9-202ENST00000595659 OR6C6A6NF89 314 aa14.37□□□□□ -0.11
CCDC9-202ENST00000595659 J3QLI3 93 aa14.37□□□□□ -0.11
CCDC9-202ENST00000595659 DCTN6O00399 190 aa14.37□□□□□ -0.11
CCDC9-202ENST00000595659 NDUFAB1O14561 156 aa14.37□□□□□ -0.11
CCDC9-202ENST00000595659 IGHV2-70P01814 119 aa14.37□□□□□ -0.11
CCDC9-202ENST00000595659 TNFSF4P23510 183 aa14.37□□□□□ -0.11
CCDC9-202ENST00000595659 MSX2P35548 267 aaPredicted RBP14.37□□□□□ -0.11
CCDC9-202ENST00000595659 KRT72Q14CN4 511 aa14.37□□□□□ -0.11
CCDC9-202ENST00000595659 OR2T2Q6IF00 324 aa14.37□□□□□ -0.11
CCDC9-202ENST00000595659 CORO6Q6QEF8 472 aa14.37□□□□□ -0.11
CCDC9-202ENST00000595659 ATG16L2Q8NAA4 619 aa14.37□□□□□ -0.11
CCDC9-202ENST00000595659 NANPQ8TBE9 248 aa14.37□□□□□ -0.11
CCDC9-202ENST00000595659 PTP4A1Q93096 173 aa14.37□□□□□ -0.11
CCDC9-202ENST00000595659 CMTM5Q96DZ9 223 aa14.37□□□□□ -0.11
CCDC9-202ENST00000595659 ERMAPQ96PL5 475 aaPredicted RBP14.37□□□□□ -0.11
CCDC9-202ENST00000595659 OR2V2Q96R30 315 aa14.37□□□□□ -0.11
CCDC9-202ENST00000595659 GPX7Q96SL4 187 aaPredicted RBP14.37□□□□□ -0.11
CCDC9-202ENST00000595659 WACQ9BTA9 647 aa14.37□□□□□ -0.11
CCDC9-202ENST00000595659 SRA1Q9HD15 236 aaKnown RBP14.37□□□□□ -0.11
CCDC9-202ENST00000595659 MMP26Q9NRE1 261 aa14.37□□□□□ -0.11
CCDC9-202ENST00000595659 GMNNO75496 209 aa14.36□□□□□ -0.11
CCDC9-202ENST00000595659 ZNF205O95201 554 aa14.36□□□□□ -0.11
CCDC9-202ENST00000595659 KITLGP21583 273 aa14.36□□□□□ -0.11
CCDC9-202ENST00000595659 CFPP27918 469 aa14.36□□□□□ -0.11
CCDC9-202ENST00000595659 RPS6KA3P51812 740 aa14.36□□□□□ -0.11
CCDC9-202ENST00000595659 HILS1P60008 231 aa14.36□□□□□ -0.11
CCDC9-202ENST00000595659 SEC61A1P61619 476 aaKnown RBP14.36□□□□□ -0.11
CCDC9-202ENST00000595659 LSM6P62312 80 aaKnown RBP14.36□□□□□ -0.11
CCDC9-202ENST00000595659 DPY19L2P2Q6ZN68 376 aa14.36□□□□□ -0.11
CCDC9-202ENST00000595659 ADCK1Q86TW2 530 aa14.36□□□□□ -0.11
CCDC9-202ENST00000595659 TEX29Q8N6K0 151 aa14.36□□□□□ -0.11
CCDC9-202ENST00000595659 SAMD8Q96LT4 415 aa14.36□□□□□ -0.11
CCDC9-202ENST00000595659 FUZQ9BT04 418 aa14.36□□□□□ -0.11
CCDC9-202ENST00000595659 SPAG4Q9NPE6 437 aa14.36□□□□□ -0.11
CCDC9-202ENST00000595659 MED4Q9NPJ6 270 aa14.36□□□□□ -0.11
CCDC9-202ENST00000595659 SAMD4AQ9UPU9 718 aaKnown RBP14.36□□□□□ -0.11
CCDC9-202ENST00000595659 PPP1R3CQ9UQK1 317 aa14.36□□□□□ -0.11
CCDC9-202ENST00000595659 H0YL77 283 aa14.35□□□□□ -0.11
CCDC9-202ENST00000595659 TNFRSF1AP19438 455 aa14.35□□□□□ -0.11
CCDC9-202ENST00000595659 PRSS12P56730 875 aa14.35□□□□□ -0.11
CCDC9-202ENST00000595659 SPIBQ01892 262 aa14.35□□□□□ -0.11
CCDC9-202ENST00000595659 ZMYND11Q15326 602 aa14.35□□□□□ -0.11
CCDC9-202ENST00000595659 LEG1Q6P5S2 330 aa14.35□□□□□ -0.11
CCDC9-202ENST00000595659 SMARCD3Q6STE5 483 aa14.35□□□□□ -0.11
CCDC9-202ENST00000595659 BPIFB2Q8N4F0 458 aa14.35□□□□□ -0.11
CCDC9-202ENST00000595659 OR10AD1Q8NGE0 317 aa14.35□□□□□ -0.11
CCDC9-202ENST00000595659 OR4K13Q8NH42 304 aa14.35□□□□□ -0.11
CCDC9-202ENST00000595659 ZFAND2BQ8WV99 257 aa14.35□□□□□ -0.11
CCDC9-202ENST00000595659 GCDHQ92947 438 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms