RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 GABARAPL3Q9BY60 117 aa22.2■■□□□ 1.14
TRIM28-204ENST00000594806 TUBG2Q9NRH3 451 aa22.2■■□□□ 1.14
TRIM28-204ENST00000594806 TVP23BQ9NYZ1 205 aa22.2■■□□□ 1.14
TRIM28-204ENST00000594806 FAM183AA6NL82 134 aa22.19■■□□□ 1.14
TRIM28-204ENST00000594806 ALPLP05186 524 aa22.19■■□□□ 1.14
TRIM28-204ENST00000594806 GYPBP06028 91 aa22.19■■□□□ 1.14
TRIM28-204ENST00000594806 CDKN1AP38936 164 aa22.19■■□□□ 1.14
TRIM28-204ENST00000594806 ENTPD1P49961 510 aa22.19■■□□□ 1.14
TRIM28-204ENST00000594806 ALDH3A2P51648 485 aa22.19■■□□□ 1.14
TRIM28-204ENST00000594806 SELENOVP59797 346 aa22.19■■□□□ 1.14
TRIM28-204ENST00000594806 SLC35D3Q5M8T2 416 aa22.19■■□□□ 1.14
TRIM28-204ENST00000594806 LINC01590Q5TEZ4 76 aa22.19■■□□□ 1.14
TRIM28-204ENST00000594806 PLBD1Q6P4A8 553 aa22.19■■□□□ 1.14
TRIM28-204ENST00000594806 CPOQ8IVL8 374 aa22.19■■□□□ 1.14
TRIM28-204ENST00000594806 OR6K6Q8NGW6 343 aa22.19■■□□□ 1.14
TRIM28-204ENST00000594806 ZNRF4Q8WWF5 429 aa22.19■■□□□ 1.14
TRIM28-204ENST00000594806 OTULINQ96BN8 352 aa22.19■■□□□ 1.14
TRIM28-204ENST00000594806 PERPQ96FX8 193 aa22.19■■□□□ 1.14
TRIM28-204ENST00000594806 C4orf45Q96LM5 186 aa22.19■■□□□ 1.14
TRIM28-204ENST00000594806 BARX1Q9HBU1 254 aaPredicted RBP22.19■■□□□ 1.14
TRIM28-204ENST00000594806 TBCCD1Q9NVR7 557 aa22.19■■□□□ 1.14
TRIM28-204ENST00000594806 GDF2Q9UK05 429 aaPredicted RBP22.19■■□□□ 1.14
TRIM28-204ENST00000594806 COMMD3-BMI1R4GMX3 469 aa22.19■■□□□ 1.14
TRIM28-204ENST00000594806 J3QW42 95 aa22.18■■□□□ 1.14
TRIM28-204ENST00000594806 GPRIN2O60269 458 aa22.18■■□□□ 1.14
TRIM28-204ENST00000594806 LCKP06239 509 aa22.18■■□□□ 1.14
TRIM28-204ENST00000594806 FAM157BP0CG42 384 aa22.18■■□□□ 1.14
TRIM28-204ENST00000594806 CLUP10909 449 aa22.18■■□□□ 1.14
TRIM28-204ENST00000594806 RAD23AP54725 363 aa22.18■■□□□ 1.14
TRIM28-204ENST00000594806 OTPQ5XKR4 325 aa22.18■■□□□ 1.14
TRIM28-204ENST00000594806 C12orf73Q69YU5 71 aa22.18■■□□□ 1.14
TRIM28-204ENST00000594806 COG8Q96MW5 612 aa22.18■■□□□ 1.14
TRIM28-204ENST00000594806 DOK1Q99704 481 aa22.18■■□□□ 1.14
TRIM28-204ENST00000594806 HCAR1Q9BXC0 346 aa22.18■■□□□ 1.14
TRIM28-204ENST00000594806 OR51V1Q9H2C8 321 aa22.18■■□□□ 1.14
TRIM28-204ENST00000594806 MED20Q9H944 212 aa22.18■■□□□ 1.14
TRIM28-204ENST00000594806 MARCH7Q9H992 704 aa22.18■■□□□ 1.14
TRIM28-204ENST00000594806 HINT3Q9NQE9 182 aaKnown RBP22.18■■□□□ 1.14
TRIM28-204ENST00000594806 TVP23AA6NH52 213 aa22.17■■□□□ 1.14
TRIM28-204ENST00000594806 H3BSA7 217 aa22.17■■□□□ 1.14
TRIM28-204ENST00000594806 ZNF250P15622 560 aa22.17■■□□□ 1.14
TRIM28-204ENST00000594806 GSTT1P30711 240 aa22.17■■□□□ 1.14
TRIM28-204ENST00000594806 WNT5AP41221 380 aa22.17■■□□□ 1.14
TRIM28-204ENST00000594806 RGS6P49758 472 aa22.17■■□□□ 1.14
TRIM28-204ENST00000594806 PPOXP50336 477 aa22.17■■□□□ 1.14
TRIM28-204ENST00000594806 DBPQ10586 325 aaPredicted RBP22.17■■□□□ 1.14
TRIM28-204ENST00000594806 CORO6Q6QEF8 472 aa22.17■■□□□ 1.14
TRIM28-204ENST00000594806 CXXC5Q7LFL8 322 aaKnown RBP22.17■■□□□ 1.14
TRIM28-204ENST00000594806 LINC00346Q8IVM7 164 aa22.17■■□□□ 1.14
TRIM28-204ENST00000594806 ZNF511Q8NB15 262 aa22.17■■□□□ 1.14
TRIM28-204ENST00000594806 OR1J1Q8NGS3 322 aa22.17■■□□□ 1.14
TRIM28-204ENST00000594806 PITX2Q99697 317 aa22.17■■□□□ 1.14
TRIM28-204ENST00000594806 TMEM129A0AVI4 362 aa22.16■■□□□ 1.14
TRIM28-204ENST00000594806 ZNF593O00488 134 aaPredicted RBP22.16■■□□□ 1.14
TRIM28-204ENST00000594806 EI24O14681 340 aa22.16■■□□□ 1.14
TRIM28-204ENST00000594806 ABHD16AO95870 558 aa22.16■■□□□ 1.14
TRIM28-204ENST00000594806 MOGQ16653 247 aa22.16■■□□□ 1.14
TRIM28-204ENST00000594806 SHFQ7M4L6 423 aa22.16■■□□□ 1.14
TRIM28-204ENST00000594806 INTS14Q96SY0 518 aa22.16■■□□□ 1.14
TRIM28-204ENST00000594806 ATF6BQ99941 703 aa22.16■■□□□ 1.14
TRIM28-204ENST00000594806 MRPL37Q9BZE1 423 aaKnown RBP22.16■■□□□ 1.14
TRIM28-204ENST00000594806 WDR76Q9H967 626 aa22.16■■□□□ 1.14
TRIM28-204ENST00000594806 GPR160Q9UJ42 338 aa22.16■■□□□ 1.14
TRIM28-204ENST00000594806 BAG2O95816 211 aa22.15■■□□□ 1.14
TRIM28-204ENST00000594806 EPHA2P29317 976 aa22.15■■□□□ 1.14
TRIM28-204ENST00000594806 EFNB1P98172 346 aa22.15■■□□□ 1.14
TRIM28-204ENST00000594806 ZNF718Q3SXZ3 478 aa22.15■■□□□ 1.14
TRIM28-204ENST00000594806 KLHL12Q53G59 568 aa22.15■■□□□ 1.14
TRIM28-204ENST00000594806 CFAP77Q6ZQR2 320 aa22.15■■□□□ 1.14
TRIM28-204ENST00000594806 ZNF101Q8IZC7 436 aa22.15■■□□□ 1.14
TRIM28-204ENST00000594806 CBR4Q8N4T8 237 aa22.15■■□□□ 1.14
TRIM28-204ENST00000594806 SYNPRQ8TBG9 265 aa22.15■■□□□ 1.14
TRIM28-204ENST00000594806 RIBC2Q9H4K1 309 aa22.15■■□□□ 1.14
TRIM28-204ENST00000594806 IGLV3-9A0A075B6K5 115 aa22.14■■□□□ 1.13
TRIM28-204ENST00000594806 SLC2A5P22732 501 aa22.14■■□□□ 1.13
TRIM28-204ENST00000594806 Q5PR19 223 aa22.14■■□□□ 1.13
TRIM28-204ENST00000594806 ZBTB49Q6ZSB9 765 aa22.14■■□□□ 1.13
TRIM28-204ENST00000594806 ABHD4Q8TB40 342 aa22.14■■□□□ 1.13
TRIM28-204ENST00000594806 EME1Q96AY2 570 aa22.14■■□□□ 1.13
TRIM28-204ENST00000594806 OR51B6Q9H340 312 aa22.14■■□□□ 1.13
TRIM28-204ENST00000594806 MS4A5Q9H3V2 200 aa22.14■■□□□ 1.13
TRIM28-204ENST00000594806 SLCO1C1Q9NYB5 712 aa22.14■■□□□ 1.13
TRIM28-204ENST00000594806 H2AFY2Q9P0M6 372 aaPredicted RBP22.14■■□□□ 1.13
TRIM28-204ENST00000594806 GRIP1Q9Y3R0 1128 aa22.14■■□□□ 1.13
TRIM28-204ENST00000594806 ERCC1P07992 297 aaPredicted RBP22.13■■□□□ 1.13
TRIM28-204ENST00000594806 SPARCP09486 303 aa22.13■■□□□ 1.13
TRIM28-204ENST00000594806 GCH1P30793 250 aa22.13■■□□□ 1.13
TRIM28-204ENST00000594806 KLF3P57682 345 aaPredicted RBP22.13■■□□□ 1.13
TRIM28-204ENST00000594806 PPP1CBP62140 327 aa22.13■■□□□ 1.13
TRIM28-204ENST00000594806 MSMPQ1L6U9 139 aa22.13■■□□□ 1.13
TRIM28-204ENST00000594806 KRTAP27-1Q3LI81 207 aa22.13■■□□□ 1.13
TRIM28-204ENST00000594806 LCN1P1Q5VSP4 162 aa22.13■■□□□ 1.13
TRIM28-204ENST00000594806 MBNL2Q5VZF2 373 aaKnown RBP22.13■■□□□ 1.13
TRIM28-204ENST00000594806 LYPD4Q6UWN0 246 aa22.13■■□□□ 1.13
TRIM28-204ENST00000594806 RHOUQ7L0Q8 258 aa22.13■■□□□ 1.13
TRIM28-204ENST00000594806 DCXRQ7Z4W1 244 aa22.13■■□□□ 1.13
TRIM28-204ENST00000594806 KRTAP1-3Q8IUG1 177 aa22.13■■□□□ 1.13
TRIM28-204ENST00000594806 TIGD4Q8IY51 512 aa22.13■■□□□ 1.13
TRIM28-204ENST00000594806 TMEM163Q8TC26 289 aa22.13■■□□□ 1.13
TRIM28-204ENST00000594806 MAP6Q96JE9 813 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms