RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 NDEL1Q9GZM8 345 aa17.26■□□□□ 0.35
TRIM47-207ENST00000593089 SYT4Q9H2B2 425 aa17.26■□□□□ 0.35
TRIM47-207ENST00000593089 PATZ1Q9HBE1 687 aaKnown RBP17.26■□□□□ 0.35
TRIM47-207ENST00000593089 MMP26Q9NRE1 261 aa17.26■□□□□ 0.35
TRIM47-207ENST00000593089 TUBG2Q9NRH3 451 aa17.26■□□□□ 0.35
TRIM47-207ENST00000593089 ASH2LQ9UBL3 628 aa17.26■□□□□ 0.35
TRIM47-207ENST00000593089 PPIAL4AQ9Y536 164 aa17.26■□□□□ 0.35
TRIM47-207ENST00000593089 IMPA2O14732 288 aa17.25■□□□□ 0.35
TRIM47-207ENST00000593089 AHCYL1O43865 530 aa17.25■□□□□ 0.35
TRIM47-207ENST00000593089 SLC16A7O60669 478 aa17.25■□□□□ 0.35
TRIM47-207ENST00000593089 COX4I1P13073 169 aa17.25■□□□□ 0.35
TRIM47-207ENST00000593089 ZNF283Q8N7M2 679 aa17.25■□□□□ 0.35
TRIM47-207ENST00000593089 DEFB108BQ8NET1 73 aa17.25■□□□□ 0.35
TRIM47-207ENST00000593089 DVL3Q92997 716 aaPredicted RBP17.25■□□□□ 0.35
TRIM47-207ENST00000593089 FAM162AQ96A26 154 aa17.25■□□□□ 0.35
TRIM47-207ENST00000593089 HAVCR1Q96D42 359 aa17.25■□□□□ 0.35
TRIM47-207ENST00000593089 NMNAT1Q9HAN9 279 aaPredicted RBP17.25■□□□□ 0.35
TRIM47-207ENST00000593089 IL19Q9UHD0 177 aa17.25■□□□□ 0.35
TRIM47-207ENST00000593089 IL20RAQ9UHF4 553 aa17.25■□□□□ 0.35
TRIM47-207ENST00000593089 PPP1R3CQ9UQK1 317 aa17.25■□□□□ 0.35
TRIM47-207ENST00000593089 TMEM5Q9Y2B1 443 aa17.25■□□□□ 0.35
TRIM47-207ENST00000593089 COA3Q9Y2R0 106 aaPredicted RBP17.25■□□□□ 0.35
TRIM47-207ENST00000593089 PPIAL4EA0A075B759 164 aa17.24■□□□□ 0.35
TRIM47-207ENST00000593089 PPIAL4CA0A0B4J2A2 164 aa17.24■□□□□ 0.35
TRIM47-207ENST00000593089 PPIAL4DF5H284 164 aa17.24■□□□□ 0.35
TRIM47-207ENST00000593089 TRAPPC2LH3BP13 241 aa17.24■□□□□ 0.35
TRIM47-207ENST00000593089 SPRY1O43609 319 aaPredicted RBP17.24■□□□□ 0.35
TRIM47-207ENST00000593089 KHDRBS3O75525 346 aaKnown RBP17.24■□□□□ 0.35
TRIM47-207ENST00000593089 NDUFB2O95178 105 aa17.24■□□□□ 0.35
TRIM47-207ENST00000593089 PPIAL4FP0DN26 164 aa17.24■□□□□ 0.35
TRIM47-207ENST00000593089 NCK1P16333 377 aa17.24■□□□□ 0.35
TRIM47-207ENST00000593089 GSK3BP49841 420 aa17.24■□□□□ 0.35
TRIM47-207ENST00000593089 BTG1P62324 171 aa17.24■□□□□ 0.35
TRIM47-207ENST00000593089 UBA52P62987 128 aaKnown RBP17.24■□□□□ 0.35
TRIM47-207ENST00000593089 GUCY1A3Q02108 690 aa17.24■□□□□ 0.35
TRIM47-207ENST00000593089 ZMYND11Q15326 602 aa17.24■□□□□ 0.35
TRIM47-207ENST00000593089 TMEM155Q4W5P6 130 aa17.24■□□□□ 0.35
TRIM47-207ENST00000593089 ARMCX4Q5H9R4 360 aa17.24■□□□□ 0.35
TRIM47-207ENST00000593089 TSEN54Q7Z6J9 526 aaKnown RBP17.24■□□□□ 0.35
TRIM47-207ENST00000593089 LRRC28Q86X40 367 aaPredicted RBP17.24■□□□□ 0.35
TRIM47-207ENST00000593089 OR5AS1Q8N127 324 aa17.24■□□□□ 0.35
TRIM47-207ENST00000593089 SLC7A13Q8TCU3 470 aa17.24■□□□□ 0.35
TRIM47-207ENST00000593089 ZMYND19Q96E35 227 aaPredicted RBP17.24■□□□□ 0.35
TRIM47-207ENST00000593089 COG8Q96MW5 612 aa17.24■□□□□ 0.35
TRIM47-207ENST00000593089 OR2V2Q96R30 315 aa17.24■□□□□ 0.35
TRIM47-207ENST00000593089 SIGLEC11Q96RL6 698 aa17.24■□□□□ 0.35
TRIM47-207ENST00000593089 ANKRD19PQ9H560 264 aa17.24■□□□□ 0.35
TRIM47-207ENST00000593089 NTN4Q9HB63 628 aa17.24■□□□□ 0.35
TRIM47-207ENST00000593089 DDX28Q9NUL7 540 aaKnown RBP17.24■□□□□ 0.35
TRIM47-207ENST00000593089 ENPP4Q9Y6X5 453 aa17.24■□□□□ 0.35
TRIM47-207ENST00000593089 SOCS2O14508 198 aa17.23■□□□□ 0.35
TRIM47-207ENST00000593089 SURF4O15260 269 aa17.23■□□□□ 0.35
TRIM47-207ENST00000593089 PTP4A3O75365 173 aa17.23■□□□□ 0.35
TRIM47-207ENST00000593089 DBHP09172 617 aa17.23■□□□□ 0.35
TRIM47-207ENST00000593089 EGR1P18146 543 aa17.23■□□□□ 0.35
TRIM47-207ENST00000593089 SDHAP31040 664 aa17.23■□□□□ 0.35
TRIM47-207ENST00000593089 SLC6A9P48067 706 aa17.23■□□□□ 0.35
TRIM47-207ENST00000593089 ZNF154Q13106 437 aa17.23■□□□□ 0.35
TRIM47-207ENST00000593089 HLXQ14774 488 aaPredicted RBP17.23■□□□□ 0.35
TRIM47-207ENST00000593089 CCDC92Q53HC0 331 aaPredicted RBP17.23■□□□□ 0.35
TRIM47-207ENST00000593089 AWAT1Q58HT5 328 aa17.23■□□□□ 0.35
TRIM47-207ENST00000593089 FGD3Q5JSP0 725 aa17.23■□□□□ 0.35
TRIM47-207ENST00000593089 RBMS3Q6XE24 437 aaKnown RBP17.23■□□□□ 0.35
TRIM47-207ENST00000593089 GLB1L2Q8IW92 636 aa17.23■□□□□ 0.35
TRIM47-207ENST00000593089 SIGLECL1Q8N7X8 197 aa17.23■□□□□ 0.35
TRIM47-207ENST00000593089 ATG16L2Q8NAA4 619 aa17.23■□□□□ 0.35
TRIM47-207ENST00000593089 OR1F12Q8NHA8 337 aa17.23■□□□□ 0.35
TRIM47-207ENST00000593089 PTP4A1Q93096 173 aa17.23■□□□□ 0.35
TRIM47-207ENST00000593089 POP5Q969H6 163 aaKnown RBP17.23■□□□□ 0.35
TRIM47-207ENST00000593089 HOPXQ9BPY8 73 aaPredicted RBP17.23■□□□□ 0.35
TRIM47-207ENST00000593089 NRIP3Q9NQ35 241 aa17.23■□□□□ 0.35
TRIM47-207ENST00000593089 PTTG3PQ9NZH4 202 aa17.23■□□□□ 0.35
TRIM47-207ENST00000593089 SIGLEC7Q9Y286 467 aa17.23■□□□□ 0.35
TRIM47-207ENST00000593089 AUP1Q9Y679 476 aa17.23■□□□□ 0.35
TRIM47-207ENST00000593089 OR6C6A6NF89 314 aa17.22■□□□□ 0.35
TRIM47-207ENST00000593089 RER1O15258 196 aa17.22■□□□□ 0.35
TRIM47-207ENST00000593089 H1F0P07305 194 aaKnown RBP17.22■□□□□ 0.35
TRIM47-207ENST00000593089 ZNF12P17014 697 aa17.22■□□□□ 0.35
TRIM47-207ENST00000593089 LSM6P62312 80 aaKnown RBP17.22■□□□□ 0.35
TRIM47-207ENST00000593089 GPR139Q6DWJ6 353 aa17.22■□□□□ 0.35
TRIM47-207ENST00000593089 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.22■□□□□ 0.35
TRIM47-207ENST00000593089 RSRC1Q96IZ7 334 aaKnown RBP17.22■□□□□ 0.35
TRIM47-207ENST00000593089 KCTD14Q9BQ13 255 aaPredicted RBP17.22■□□□□ 0.35
TRIM47-207ENST00000593089 NUAK2Q9H093 628 aa17.22■□□□□ 0.35
TRIM47-207ENST00000593089 EFCAB1Q9HAE3 211 aa17.22■□□□□ 0.35
TRIM47-207ENST00000593089 VSX1Q9NZR4 365 aaPredicted RBP17.22■□□□□ 0.35
TRIM47-207ENST00000593089 NUP50Q9UKX7 468 aa17.22■□□□□ 0.35
TRIM47-207ENST00000593089 POLR1DQ9Y2S0 133 aa17.22■□□□□ 0.35
TRIM47-207ENST00000593089 INSIG2Q9Y5U4 225 aa17.22■□□□□ 0.35
TRIM47-207ENST00000593089 IER3IP1Q9Y5U9 82 aa17.22■□□□□ 0.35
TRIM47-207ENST00000593089 GPANK1O95872 356 aa17.21■□□□□ 0.35
TRIM47-207ENST00000593089 RAC2P15153 192 aa17.21■□□□□ 0.35
TRIM47-207ENST00000593089 CENPAP49450 140 aa17.21■□□□□ 0.35
TRIM47-207ENST00000593089 NUDT2P50583 147 aa17.21■□□□□ 0.35
TRIM47-207ENST00000593089 MMP16P51512 607 aa17.21■□□□□ 0.35
TRIM47-207ENST00000593089 ESCO2Q56NI9 601 aa17.21■□□□□ 0.35
TRIM47-207ENST00000593089 OR2T2Q6IF00 324 aa17.21■□□□□ 0.35
TRIM47-207ENST00000593089 C8orf82Q6P1X6 216 aaPredicted RBP17.21■□□□□ 0.35
TRIM47-207ENST00000593089 PTCHD4Q6ZW05 846 aa17.21■□□□□ 0.35
TRIM47-207ENST00000593089 OR10AD1Q8NGE0 317 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms