RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 HERVK_113Q902F9 699 aa16.14■□□□□ 0.18
SPC24-206ENST00000592540 DCUN1D4Q92564 292 aa16.14■□□□□ 0.18
SPC24-206ENST00000592540 ELSPBP1Q96BH3 223 aa16.14■□□□□ 0.18
SPC24-206ENST00000592540 TMEM231Q9H6L2 316 aa16.14■□□□□ 0.18
SPC24-206ENST00000592540 MMP26Q9NRE1 261 aa16.14■□□□□ 0.18
SPC24-206ENST00000592540 FREM3P0C091 2139 aa16.14■□□□□ 0.17
SPC24-206ENST00000592540 CACNA1IQ9P0X4 2223 aa16.14■□□□□ 0.17
SPC24-206ENST00000592540 LINC01387J3KSC0 135 aa16.14■□□□□ 0.17
SPC24-206ENST00000592540 NUDT21O43809 227 aaKnown RBP16.14■□□□□ 0.17
SPC24-206ENST00000592540 ERCC1P07992 297 aaPredicted RBP16.14■□□□□ 0.17
SPC24-206ENST00000592540 POU2F2P09086 479 aa16.14■□□□□ 0.17
SPC24-206ENST00000592540 CCL5P13501 91 aa16.14■□□□□ 0.17
SPC24-206ENST00000592540 HPGDP15428 266 aa16.14■□□□□ 0.17
SPC24-206ENST00000592540 RIDAP52758 137 aaKnown RBP16.14■□□□□ 0.17
SPC24-206ENST00000592540 PPP1CAP62136 330 aa16.14■□□□□ 0.17
SPC24-206ENST00000592540 BTG2P78543 158 aa16.14■□□□□ 0.17
SPC24-206ENST00000592540 NAAAQ02083 359 aa16.14■□□□□ 0.17
SPC24-206ENST00000592540 FAHD2BQ6P2I3 314 aaPredicted RBP16.14■□□□□ 0.17
SPC24-206ENST00000592540 MED25Q71SY5 747 aa16.14■□□□□ 0.17
SPC24-206ENST00000592540 TRAPPC6BQ86SZ2 158 aa16.14■□□□□ 0.17
SPC24-206ENST00000592540 GVQW1Q8N7I0 195 aa16.14■□□□□ 0.17
SPC24-206ENST00000592540 RXFP4Q8TDU9 374 aa16.14■□□□□ 0.17
SPC24-206ENST00000592540 TMED6Q8WW62 240 aa16.14■□□□□ 0.17
SPC24-206ENST00000592540 NKD1Q969G9 470 aa16.14■□□□□ 0.17
SPC24-206ENST00000592540 C8orf44Q96CB5 159 aa16.14■□□□□ 0.17
SPC24-206ENST00000592540 DNAJA3Q96EY1 480 aa16.14■□□□□ 0.17
SPC24-206ENST00000592540 FAHD2AQ96GK7 314 aa16.14■□□□□ 0.17
SPC24-206ENST00000592540 KLHDC3Q9BQ90 382 aa16.14■□□□□ 0.17
SPC24-206ENST00000592540 CYTL1Q9NRR1 136 aa16.14■□□□□ 0.17
SPC24-206ENST00000592540 UQCC1Q9NVA1 299 aa16.14■□□□□ 0.17
SPC24-206ENST00000592540 MRPL22Q9NWU5 206 aaKnown RBP16.14■□□□□ 0.17
SPC24-206ENST00000592540 ZMAT5Q9UDW3 170 aaKnown RBP16.14■□□□□ 0.17
SPC24-206ENST00000592540 ARID1BQ8NFD5 2236 aaPredicted RBP16.14■□□□□ 0.17
SPC24-206ENST00000592540 XIRP2A4UGR9 3374 aa16.14■□□□□ 0.17
SPC24-206ENST00000592540 A0A0A6YYC8 382 aaPredicted RBP16.13■□□□□ 0.17
SPC24-206ENST00000592540 MEGF11A6BM72 1044 aa16.13■□□□□ 0.17
SPC24-206ENST00000592540 C5orf51A6NDU8 294 aa16.13■□□□□ 0.17
SPC24-206ENST00000592540 C11orf98E9PRG8 122 aa16.13■□□□□ 0.17
SPC24-206ENST00000592540 I3L1I5 382 aaPredicted RBP16.13■□□□□ 0.17
SPC24-206ENST00000592540 EFSO43281 561 aa16.13■□□□□ 0.17
SPC24-206ENST00000592540 OR6A2O95222 327 aa16.13■□□□□ 0.17
SPC24-206ENST00000592540 AKR1C4P17516 323 aa16.13■□□□□ 0.17
SPC24-206ENST00000592540 DNASE1L1P49184 302 aa16.13■□□□□ 0.17
SPC24-206ENST00000592540 NR0B1P51843 470 aaKnown RBP16.13■□□□□ 0.17
SPC24-206ENST00000592540 SEC13P55735 322 aa16.13■□□□□ 0.17
SPC24-206ENST00000592540 ZNF260Q3ZCT1 412 aa16.13■□□□□ 0.17
SPC24-206ENST00000592540 OR52W1Q6IF63 320 aa16.13■□□□□ 0.17
SPC24-206ENST00000592540 MDGA2Q7Z553 956 aa16.13■□□□□ 0.17
SPC24-206ENST00000592540 SFT2D1Q8WV19 159 aa16.13■□□□□ 0.17
SPC24-206ENST00000592540 PTX4Q96A99 478 aa16.13■□□□□ 0.17
SPC24-206ENST00000592540 FAM131CQ96AQ9 280 aa16.13■□□□□ 0.17
SPC24-206ENST00000592540 FANCFQ9NPI8 374 aa16.13■□□□□ 0.17
SPC24-206ENST00000592540 UBQLN4Q9NRR5 601 aa16.13■□□□□ 0.17
SPC24-206ENST00000592540 TRBV6-7A0A0A0MS04 114 aa16.13■□□□□ 0.17
SPC24-206ENST00000592540 A0A0B4J2A0 478 aa16.13■□□□□ 0.17
SPC24-206ENST00000592540 C13orf42A0A1B0GVH6 325 aa16.13■□□□□ 0.17
SPC24-206ENST00000592540 MEX3AA1L020 520 aaKnown RBP16.13■□□□□ 0.17
SPC24-206ENST00000592540 K7EQS6 105 aa16.13■□□□□ 0.17
SPC24-206ENST00000592540 DUS4LO95620 317 aaKnown RBP16.13■□□□□ 0.17
SPC24-206ENST00000592540 HEXAP06865 529 aa16.13■□□□□ 0.17
SPC24-206ENST00000592540 RNH1P13489 461 aaKnown RBP16.13■□□□□ 0.17
SPC24-206ENST00000592540 ABOP16442 354 aa16.13■□□□□ 0.17
SPC24-206ENST00000592540 FCARP24071 287 aa16.13■□□□□ 0.17
SPC24-206ENST00000592540 IGLV3-21P80748 117 aaPredicted RBP16.13■□□□□ 0.17
SPC24-206ENST00000592540 PDZK1IP1Q13113 114 aa16.13■□□□□ 0.17
SPC24-206ENST00000592540 PNLIPRP3Q17RR3 467 aa16.13■□□□□ 0.17
SPC24-206ENST00000592540 SLC22A6Q4U2R8 563 aa16.13■□□□□ 0.17
SPC24-206ENST00000592540 C1orf100Q5SVJ3 147 aa16.13■□□□□ 0.17
SPC24-206ENST00000592540 KCTD18Q6PI47 426 aaPredicted RBP16.13■□□□□ 0.17
SPC24-206ENST00000592540 ZNF615Q8N8J6 731 aa16.13■□□□□ 0.17
SPC24-206ENST00000592540 ZNF563Q8TA94 476 aa16.13■□□□□ 0.17
SPC24-206ENST00000592540 ZNF296Q8WUU4 475 aaPredicted RBP16.13■□□□□ 0.17
SPC24-206ENST00000592540 CAPNS2Q96L46 248 aa16.13■□□□□ 0.17
SPC24-206ENST00000592540 RNF126Q9BV68 326 aa16.13■□□□□ 0.17
SPC24-206ENST00000592540 FAM60AQ9NP50 221 aa16.13■□□□□ 0.17
SPC24-206ENST00000592540 PRTFDC1Q9NRG1 225 aa16.13■□□□□ 0.17
SPC24-206ENST00000592540 SHPKQ9UHJ6 478 aa16.13■□□□□ 0.17
SPC24-206ENST00000592540 GDF2Q9UK05 429 aaPredicted RBP16.13■□□□□ 0.17
SPC24-206ENST00000592540 LRP12Q9Y561 859 aa16.13■□□□□ 0.17
SPC24-206ENST00000592540 CLDN16Q9Y5I7 305 aa16.13■□□□□ 0.17
SPC24-206ENST00000592540 CDH23Q9H251 3354 aa16.12■□□□□ 0.17
SPC24-206ENST00000592540 DBX1A6NMT0 343 aa16.12■□□□□ 0.17
SPC24-206ENST00000592540 ZNF264O43296 627 aa16.12■□□□□ 0.17
SPC24-206ENST00000592540 IFNA4P05014 189 aa16.12■□□□□ 0.17
SPC24-206ENST00000592540 FAM157CP0CG43 387 aa16.12■□□□□ 0.17
SPC24-206ENST00000592540 SERPINF1P36955 418 aa16.12■□□□□ 0.17
SPC24-206ENST00000592540 FUT7Q11130 342 aa16.12■□□□□ 0.17
SPC24-206ENST00000592540 MST1LQ2TV78 715 aa16.12■□□□□ 0.17
SPC24-206ENST00000592540 NUP54Q7Z3B4 507 aa16.12■□□□□ 0.17
SPC24-206ENST00000592540 ZFP82Q8N141 532 aa16.12■□□□□ 0.17
SPC24-206ENST00000592540 ARHGEF39Q8N4T4 335 aa16.12■□□□□ 0.17
SPC24-206ENST00000592540 ZSCAN1Q8NBB4 408 aa16.12■□□□□ 0.17
SPC24-206ENST00000592540 OR4D6Q8NGJ1 314 aa16.12■□□□□ 0.17
SPC24-206ENST00000592540 OR13C3Q8NGS6 347 aa16.12■□□□□ 0.17
SPC24-206ENST00000592540 ELP5Q8TE02 316 aa16.12■□□□□ 0.17
SPC24-206ENST00000592540 RRNAD1Q96FB5 475 aaKnown RBP16.12■□□□□ 0.17
SPC24-206ENST00000592540 LOC390937A0A1W2PQ73 354 aa16.12■□□□□ 0.17
SPC24-206ENST00000592540 PRSS37A4D1T9 235 aa16.12■□□□□ 0.17
SPC24-206ENST00000592540 RAB27BO00194 218 aa16.12■□□□□ 0.17
SPC24-206ENST00000592540 SLC16A7O60669 478 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms