RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 VSX1Q9NZR4 365 aaPredicted RBP15.94■□□□□ 0.14
CCDC43-205ENST00000592333 ARMCX1Q9P291 453 aa15.94■□□□□ 0.14
CCDC43-205ENST00000592333 ADAM18Q9Y3Q7 739 aa15.94■□□□□ 0.14
CCDC43-205ENST00000592333 NME4O00746 187 aa15.93■□□□□ 0.14
CCDC43-205ENST00000592333 KHDRBS3O75525 346 aaKnown RBP15.93■□□□□ 0.14
CCDC43-205ENST00000592333 FSTL3O95633 263 aa15.93■□□□□ 0.14
CCDC43-205ENST00000592333 SERPINA1P01009 418 aa15.93■□□□□ 0.14
CCDC43-205ENST00000592333 SCG5P05408 212 aa15.93■□□□□ 0.14
CCDC43-205ENST00000592333 RHCEP18577 417 aa15.93■□□□□ 0.14
CCDC43-205ENST00000592333 FUT4P22083 530 aa15.93■□□□□ 0.14
CCDC43-205ENST00000592333 SLC7A2P52569 658 aa15.93■□□□□ 0.14
CCDC43-205ENST00000592333 GUCY1A3Q02108 690 aa15.93■□□□□ 0.14
CCDC43-205ENST00000592333 TUSC1Q2TAM9 212 aa15.93■□□□□ 0.14
CCDC43-205ENST00000592333 TBPL2Q6SJ96 375 aa15.93■□□□□ 0.14
CCDC43-205ENST00000592333 BPIFB2Q8N4F0 458 aa15.93■□□□□ 0.14
CCDC43-205ENST00000592333 POU5F2Q8N7G0 328 aa15.93■□□□□ 0.14
CCDC43-205ENST00000592333 OR5L1Q8NGL2 311 aa15.93■□□□□ 0.14
CCDC43-205ENST00000592333 CMBLQ96DG6 245 aa15.93■□□□□ 0.14
CCDC43-205ENST00000592333 PATZ1Q9HBE1 687 aaKnown RBP15.93■□□□□ 0.14
CCDC43-205ENST00000592333 EMC7Q9NPA0 242 aa15.93■□□□□ 0.14
CCDC43-205ENST00000592333 PLEK2Q9NYT0 353 aa15.93■□□□□ 0.14
CCDC43-205ENST00000592333 OPN4Q9UHM6 478 aa15.93■□□□□ 0.14
CCDC43-205ENST00000592333 SIGLEC7Q9Y286 467 aa15.93■□□□□ 0.14
CCDC43-205ENST00000592333 FAM32AQ9Y421 112 aaKnown RBP15.93■□□□□ 0.14
CCDC43-205ENST00000592333 OR6C6A6NF89 314 aa15.92■□□□□ 0.14
CCDC43-205ENST00000592333 A8MXK9 166 aa15.92■□□□□ 0.14
CCDC43-205ENST00000592333 H7C1C5 153 aa15.92■□□□□ 0.14
CCDC43-205ENST00000592333 TXNDC12O95881 172 aa15.92■□□□□ 0.14
CCDC43-205ENST00000592333 H1F0P07305 194 aaKnown RBP15.92■□□□□ 0.14
CCDC43-205ENST00000592333 CTLA4P16410 223 aa15.92■□□□□ 0.14
CCDC43-205ENST00000592333 ZNF26P17031 533 aaPredicted RBP15.92■□□□□ 0.14
CCDC43-205ENST00000592333 GPR4P46093 362 aa15.92■□□□□ 0.14
CCDC43-205ENST00000592333 GSK3BP49841 420 aa15.92■□□□□ 0.14
CCDC43-205ENST00000592333 LCN6P62502 163 aa15.92■□□□□ 0.14
CCDC43-205ENST00000592333 KRR1Q13601 381 aaKnown RBP15.92■□□□□ 0.14
CCDC43-205ENST00000592333 FBXW12Q6X9E4 464 aa15.92■□□□□ 0.14
CCDC43-205ENST00000592333 DPY19L2P2Q6ZN68 376 aa15.92■□□□□ 0.14
CCDC43-205ENST00000592333 MUC20Q8N307 709 aaPredicted RBP15.92■□□□□ 0.14
CCDC43-205ENST00000592333 SGMS2Q8NHU3 365 aa15.92■□□□□ 0.14
CCDC43-205ENST00000592333 RASD2Q96D21 266 aa15.92■□□□□ 0.14
CCDC43-205ENST00000592333 ABCD2Q9UBJ2 740 aa15.92■□□□□ 0.14
CCDC43-205ENST00000592333 WNK2Q9Y3S1 2297 aa15.92■□□□□ 0.14
CCDC43-205ENST00000592333 SLC16A7O60669 478 aa15.91■□□□□ 0.14
CCDC43-205ENST00000592333 CRABP1P29762 137 aa15.91■□□□□ 0.14
CCDC43-205ENST00000592333 SLC6A9P48067 706 aa15.91■□□□□ 0.14
CCDC43-205ENST00000592333 RPS6KA3P51812 740 aa15.91■□□□□ 0.14
CCDC43-205ENST00000592333 BTG1P62324 171 aa15.91■□□□□ 0.14
CCDC43-205ENST00000592333 LCN2P80188 198 aa15.91■□□□□ 0.14
CCDC43-205ENST00000592333 C3orf56Q8N813 242 aa15.91■□□□□ 0.14
CCDC43-205ENST00000592333 GJC3Q8NFK1 279 aa15.91■□□□□ 0.14
CCDC43-205ENST00000592333 OR2Z1Q8NG97 314 aa15.91■□□□□ 0.14
CCDC43-205ENST00000592333 OR1F12Q8NHA8 337 aa15.91■□□□□ 0.14
CCDC43-205ENST00000592333 DVL3Q92997 716 aaPredicted RBP15.91■□□□□ 0.14
CCDC43-205ENST00000592333 FAM162AQ96A26 154 aa15.91■□□□□ 0.14
CCDC43-205ENST00000592333 GPA33Q99795 319 aa15.91■□□□□ 0.14
CCDC43-205ENST00000592333 KCTD14Q9BQ13 255 aaPredicted RBP15.91■□□□□ 0.14
CCDC43-205ENST00000592333 SYT4Q9H2B2 425 aa15.91■□□□□ 0.14
CCDC43-205ENST00000592333 ZMAT3Q9HA38 289 aaKnown RBP15.91■□□□□ 0.14
CCDC43-205ENST00000592333 UBAP1Q9NZ09 502 aa15.91■□□□□ 0.14
CCDC43-205ENST00000592333 ASH2LQ9UBL3 628 aa15.91■□□□□ 0.14
CCDC43-205ENST00000592333 SAMD4AQ9UPU9 718 aaKnown RBP15.91■□□□□ 0.14
CCDC43-205ENST00000592333 PPP1R3CQ9UQK1 317 aa15.91■□□□□ 0.14
CCDC43-205ENST00000592333 STARD10Q9Y365 291 aa15.91■□□□□ 0.14
CCDC43-205ENST00000592333 IMPA2O14732 288 aa15.9■□□□□ 0.14
CCDC43-205ENST00000592333 SBK2P0C263 348 aa15.9■□□□□ 0.14
CCDC43-205ENST00000592333 MDH2P40926 338 aaKnown RBP15.9■□□□□ 0.14
CCDC43-205ENST00000592333 OMPP47874 163 aa15.9■□□□□ 0.14
CCDC43-205ENST00000592333 HIST1H3AP68431 136 aa15.9■□□□□ 0.14
CCDC43-205ENST00000592333 HIST2H3PS2Q5TEC6 136 aa15.9■□□□□ 0.14
CCDC43-205ENST00000592333 DNM1P34Q6PK57 102 aa15.9■□□□□ 0.14
CCDC43-205ENST00000592333 Q6ZR03 302 aa15.9■□□□□ 0.14
CCDC43-205ENST00000592333 HIST2H3AQ71DI3 136 aa15.9■□□□□ 0.14
CCDC43-205ENST00000592333 TSEN54Q7Z6J9 526 aaKnown RBP15.9■□□□□ 0.14
CCDC43-205ENST00000592333 APOBEC3DQ96AK3 386 aaPredicted RBP15.9■□□□□ 0.14
CCDC43-205ENST00000592333 CMTM5Q96DZ9 223 aa15.9■□□□□ 0.14
CCDC43-205ENST00000592333 FAM46AQ96IP4 442 aaKnown RBP15.9■□□□□ 0.14
CCDC43-205ENST00000592333 HDHD2Q9H0R4 259 aa15.9■□□□□ 0.14
CCDC43-205ENST00000592333 NDUFAF4Q9P032 175 aa15.9■□□□□ 0.14
CCDC43-205ENST00000592333 PPIAL4GP0DN37 164 aa15.89■□□□□ 0.13
CCDC43-205ENST00000592333 ZNF12P17014 697 aa15.89■□□□□ 0.13
CCDC43-205ENST00000592333 ZFP36P26651 326 aaKnown RBP15.89■□□□□ 0.13
CCDC43-205ENST00000592333 SMIM11AP58511 58 aa15.89■□□□□ 0.13
CCDC43-205ENST00000592333 ZNF181Q2M3W8 571 aa15.89■□□□□ 0.13
CCDC43-205ENST00000592333 CCDC92Q53HC0 331 aaPredicted RBP15.89■□□□□ 0.13
CCDC43-205ENST00000592333 HSP90B2PQ58FF3 399 aa15.89■□□□□ 0.13
CCDC43-205ENST00000592333 SPRNQ5BIV9 151 aa15.89■□□□□ 0.13
CCDC43-205ENST00000592333 RBMS3Q6XE24 437 aaKnown RBP15.89■□□□□ 0.13
CCDC43-205ENST00000592333 DEFB108BQ8NET1 73 aa15.89■□□□□ 0.13
CCDC43-205ENST00000592333 OR13G1Q8NGZ3 307 aa15.89■□□□□ 0.13
CCDC43-205ENST00000592333 DHRS1Q96LJ7 313 aa15.89■□□□□ 0.13
CCDC43-205ENST00000592333 SIGLEC11Q96RL6 698 aa15.89■□□□□ 0.13
CCDC43-205ENST00000592333 COQ7Q99807 217 aa15.89■□□□□ 0.13
CCDC43-205ENST00000592333 SLC6A7Q99884 636 aa15.89■□□□□ 0.13
CCDC43-205ENST00000592333 PLA2G12AQ9BZM1 189 aa15.89■□□□□ 0.13
CCDC43-205ENST00000592333 NUAK2Q9H093 628 aa15.89■□□□□ 0.13
CCDC43-205ENST00000592333 DDX28Q9NUL7 540 aaKnown RBP15.89■□□□□ 0.13
CCDC43-205ENST00000592333 DCAF13Q9NV06 445 aaKnown RBP15.89■□□□□ 0.13
CCDC43-205ENST00000592333 GMPR2Q9P2T1 348 aaKnown RBP15.89■□□□□ 0.13
CCDC43-205ENST00000592333 EGFL7Q9UHF1 273 aa15.89■□□□□ 0.13
CCDC43-205ENST00000592333 IL20RAQ9UHF4 553 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms