RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 CDV3Q9UKY7 258 aaKnown RBP17.53■□□□□ 0.4
MBD3-209ENST00000592012 COL27A1Q8IZC6 1860 aaPredicted RBP17.53■□□□□ 0.4
MBD3-209ENST00000592012 A0A1W2PPL8 197 aa17.52■□□□□ 0.4
MBD3-209ENST00000592012 BDP1A6H8Y1 2624 aa17.52■□□□□ 0.4
MBD3-209ENST00000592012 PSMB1P20618 241 aaKnown RBP17.52■□□□□ 0.4
MBD3-209ENST00000592012 DCTDP32321 178 aa17.52■□□□□ 0.4
MBD3-209ENST00000592012 H3F3AP84243 136 aa17.52■□□□□ 0.4
MBD3-209ENST00000592012 HIST3H3Q16695 136 aa17.52■□□□□ 0.4
MBD3-209ENST00000592012 SLC25A47Q6Q0C1 308 aa17.52■□□□□ 0.4
MBD3-209ENST00000592012 ARMC10Q8N2F6 343 aa17.52■□□□□ 0.4
MBD3-209ENST00000592012 TMEM156Q8N614 296 aa17.52■□□□□ 0.4
MBD3-209ENST00000592012 RHBDD1Q8TEB9 315 aa17.52■□□□□ 0.4
MBD3-209ENST00000592012 NECAB3Q96P71 396 aaPredicted RBP17.52■□□□□ 0.4
MBD3-209ENST00000592012 C20orf85Q9H1P6 137 aa17.52■□□□□ 0.4
MBD3-209ENST00000592012 SEC61A2Q9H9S3 476 aa17.52■□□□□ 0.4
MBD3-209ENST00000592012 LHFPL6Q9Y693 200 aa17.52■□□□□ 0.4
MBD3-209ENST00000592012 CIB4A0PJX0 185 aa17.52■□□□□ 0.39
MBD3-209ENST00000592012 SMLR1H3BR10 107 aa17.52■□□□□ 0.39
MBD3-209ENST00000592012 ZIC3O60481 467 aa17.52■□□□□ 0.39
MBD3-209ENST00000592012 UBCP0CG48 685 aaKnown RBP17.52■□□□□ 0.39
MBD3-209ENST00000592012 LIFP15018 202 aa17.52■□□□□ 0.39
MBD3-209ENST00000592012 STOMP27105 288 aa17.52■□□□□ 0.39
MBD3-209ENST00000592012 GLYATL3Q5SZD4 288 aa17.52■□□□□ 0.39
MBD3-209ENST00000592012 DCAF12Q5T6F0 453 aa17.52■□□□□ 0.39
MBD3-209ENST00000592012 CARD17Q5XLA6 110 aa17.52■□□□□ 0.39
MBD3-209ENST00000592012 HDDC2Q7Z4H3 204 aa17.52■□□□□ 0.39
MBD3-209ENST00000592012 OR11H7Q8NGC8 314 aa17.52■□□□□ 0.39
MBD3-209ENST00000592012 EMC7Q9NPA0 242 aa17.52■□□□□ 0.39
MBD3-209ENST00000592012 DIABLOQ9NR28 239 aa17.52■□□□□ 0.39
MBD3-209ENST00000592012 SLC17A5Q9NRA2 495 aa17.52■□□□□ 0.39
MBD3-209ENST00000592012 TMEM272A0A1B0GTI8 110 aa17.51■□□□□ 0.39
MBD3-209ENST00000592012 P2RY10O00398 339 aa17.51■□□□□ 0.39
MBD3-209ENST00000592012 LMX1BO60663 402 aa17.51■□□□□ 0.39
MBD3-209ENST00000592012 STK17BO94768 372 aa17.51■□□□□ 0.39
MBD3-209ENST00000592012 CDAP32320 146 aa17.51■□□□□ 0.39
MBD3-209ENST00000592012 DNASE1L1P49184 302 aa17.51■□□□□ 0.39
MBD3-209ENST00000592012 DSCR4P56555 118 aaPredicted RBP17.51■□□□□ 0.39
MBD3-209ENST00000592012 ELFN2Q5R3F8 820 aa17.51■□□□□ 0.39
MBD3-209ENST00000592012 ZNF468Q5VIY5 522 aaPredicted RBP17.51■□□□□ 0.39
MBD3-209ENST00000592012 OLFML2AQ68BL7 652 aa17.51■□□□□ 0.39
MBD3-209ENST00000592012 CFAP77Q6ZQR2 320 aa17.51■□□□□ 0.39
MBD3-209ENST00000592012 SLC7A5P1Q8MH63 180 aa17.51■□□□□ 0.39
MBD3-209ENST00000592012 ASCC1Q8N9N2 400 aaKnown RBP17.51■□□□□ 0.39
MBD3-209ENST00000592012 GIMAP1Q8WWP7 306 aa17.51■□□□□ 0.39
MBD3-209ENST00000592012 GDF2Q9UK05 429 aaPredicted RBP17.51■□□□□ 0.39
MBD3-209ENST00000592012 PADI1Q9ULC6 663 aa17.51■□□□□ 0.39
MBD3-209ENST00000592012 MRPS18BQ9Y676 258 aaKnown RBP17.51■□□□□ 0.39
MBD3-209ENST00000592012 MEGF11A6BM72 1044 aa17.51■□□□□ 0.39
MBD3-209ENST00000592012 G3V3Y1 287 aa17.51■□□□□ 0.39
MBD3-209ENST00000592012 PMS2P2O95744 297 aa17.51■□□□□ 0.39
MBD3-209ENST00000592012 ACSM4P0C7M7 580 aa17.51■□□□□ 0.39
MBD3-209ENST00000592012 HTR2CP28335 458 aa17.51■□□□□ 0.39
MBD3-209ENST00000592012 TNK1Q13470 666 aa17.51■□□□□ 0.39
MBD3-209ENST00000592012 ST3GAL2Q16842 350 aa17.51■□□□□ 0.39
MBD3-209ENST00000592012 CD276Q5ZPR3 534 aa17.51■□□□□ 0.39
MBD3-209ENST00000592012 ZBTB44Q8NCP5 570 aa17.51■□□□□ 0.39
MBD3-209ENST00000592012 HPF1Q9NWY4 346 aa17.51■□□□□ 0.39
MBD3-209ENST00000592012 NKIRAS2Q9NYR9 191 aa17.51■□□□□ 0.39
MBD3-209ENST00000592012 FLVCR2Q9UPI3 526 aa17.51■□□□□ 0.39
MBD3-209ENST00000592012 DCDC2BA2VCK2 349 aa17.5■□□□□ 0.39
MBD3-209ENST00000592012 H7C417 338 aa17.5■□□□□ 0.39
MBD3-209ENST00000592012 KDM4BO94953 1096 aa17.5■□□□□ 0.39
MBD3-209ENST00000592012 TTRP02766 147 aa17.5■□□□□ 0.39
MBD3-209ENST00000592012 ZNF883P0CG24 379 aa17.5■□□□□ 0.39
MBD3-209ENST00000592012 MPLP40238 635 aa17.5■□□□□ 0.39
MBD3-209ENST00000592012 KLHL24Q6TFL4 600 aa17.5■□□□□ 0.39
MBD3-209ENST00000592012 ELMOD2Q8IZ81 293 aa17.5■□□□□ 0.39
MBD3-209ENST00000592012 BEST4Q8NFU0 473 aa17.5■□□□□ 0.39
MBD3-209ENST00000592012 ZFAND1Q8TCF1 268 aa17.5■□□□□ 0.39
MBD3-209ENST00000592012 ARRDC1-AS1Q9H2J1 176 aa17.5■□□□□ 0.39
MBD3-209ENST00000592012 MTFP1Q9UDX5 166 aa17.5■□□□□ 0.39
MBD3-209ENST00000592012 CGGBP1Q9UFW8 167 aaPredicted RBP17.5■□□□□ 0.39
MBD3-209ENST00000592012 ZNF726A6NNF4 738 aa17.5■□□□□ 0.39
MBD3-209ENST00000592012 PEX14O75381 377 aa17.5■□□□□ 0.39
MBD3-209ENST00000592012 QDPRP09417 244 aa17.5■□□□□ 0.39
MBD3-209ENST00000592012 RPS18P62269 152 aaKnown RBP17.5■□□□□ 0.39
MBD3-209ENST00000592012 SPOCK1Q08629 439 aa17.5■□□□□ 0.39
MBD3-209ENST00000592012 TMEM53Q6P2H8 277 aa17.5■□□□□ 0.39
MBD3-209ENST00000592012 LYPD6Q86Y78 171 aa17.5■□□□□ 0.39
MBD3-209ENST00000592012 MS4A3Q96HJ5 214 aa17.5■□□□□ 0.39
MBD3-209ENST00000592012 PBOV1Q9GZY1 135 aa17.5■□□□□ 0.39
MBD3-209ENST00000592012 NCOA6Q14686 2063 aaPredicted RBP17.49■□□□□ 0.39
MBD3-209ENST00000592012 OR2M5A3KFT3 312 aa17.49■□□□□ 0.39
MBD3-209ENST00000592012 RBBP9O75884 186 aa17.49■□□□□ 0.39
MBD3-209ENST00000592012 IGHEP01854 428 aa17.49■□□□□ 0.39
MBD3-209ENST00000592012 ALDOBP05062 364 aa17.49■□□□□ 0.39
MBD3-209ENST00000592012 CXCL3P19876 107 aa17.49■□□□□ 0.39
MBD3-209ENST00000592012 FAAP20Q6NZ36 180 aa17.49■□□□□ 0.39
MBD3-209ENST00000592012 PPP1R32Q7Z5V6 425 aa17.49■□□□□ 0.39
MBD3-209ENST00000592012 CDH24Q86UP0 819 aa17.49■□□□□ 0.39
MBD3-209ENST00000592012 JSRP1Q96MG2 331 aaPredicted RBP17.49■□□□□ 0.39
MBD3-209ENST00000592012 TCFL5Q9UL49 500 aa17.49■□□□□ 0.39
MBD3-209ENST00000592012 LOXL2Q9Y4K0 774 aa17.49■□□□□ 0.39
MBD3-209ENST00000592012 TRAV18A0A075B6X5 111 aa17.48■□□□□ 0.39
MBD3-209ENST00000592012 LOC390937A0A1W2PQ73 354 aa17.48■□□□□ 0.39
MBD3-209ENST00000592012 RAET1LQ5VY80 246 aa17.48■□□□□ 0.39
MBD3-209ENST00000592012 RHOUQ7L0Q8 258 aa17.48■□□□□ 0.39
MBD3-209ENST00000592012 OR6M1Q8NGM8 313 aa17.48■□□□□ 0.39
MBD3-209ENST00000592012 PHF21AQ96BD5 680 aa17.48■□□□□ 0.39
MBD3-209ENST00000592012 BEX1Q9HBH7 125 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms