RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 TRIM64BA6NI03 449 aa8.94□□□□□ -0.98
SDF2-208ENST00000589788 IMPA2O14732 288 aa8.94□□□□□ -0.98
SDF2-208ENST00000589788 ARPC3O15145 178 aa8.94□□□□□ -0.98
SDF2-208ENST00000589788 PRODHO43272 600 aa8.94□□□□□ -0.98
SDF2-208ENST00000589788 SSX4O60224 188 aa8.94□□□□□ -0.98
SDF2-208ENST00000589788 KHDRBS3O75525 346 aaKnown RBP8.94□□□□□ -0.98
SDF2-208ENST00000589788 TXNDC12O95881 172 aa8.94□□□□□ -0.98
SDF2-208ENST00000589788 RENP00797 406 aa8.94□□□□□ -0.98
SDF2-208ENST00000589788 CST2P09228 141 aa8.94□□□□□ -0.98
SDF2-208ENST00000589788 MMP7P09237 267 aaPredicted RBP8.94□□□□□ -0.98
SDF2-208ENST00000589788 CTLA4P16410 223 aa8.94□□□□□ -0.98
SDF2-208ENST00000589788 ZNF32P17041 273 aa8.94□□□□□ -0.98
SDF2-208ENST00000589788 GSTM3P21266 225 aa8.94□□□□□ -0.98
SDF2-208ENST00000589788 APEX1P27695 318 aaKnown RBP8.94□□□□□ -0.98
SDF2-208ENST00000589788 VHLP40337 213 aa8.94□□□□□ -0.98
SDF2-208ENST00000589788 CENPAP49450 140 aa8.94□□□□□ -0.98
SDF2-208ENST00000589788 PPP2R2BQ00005 443 aa8.94□□□□□ -0.98
SDF2-208ENST00000589788 LRRC36Q1X8D7 754 aa8.94□□□□□ -0.98
SDF2-208ENST00000589788 MST1LQ2TV78 715 aa8.94□□□□□ -0.98
SDF2-208ENST00000589788 NKAPLQ5M9Q1 402 aa8.94□□□□□ -0.98
SDF2-208ENST00000589788 ZNF770Q6IQ21 691 aaPredicted RBP8.94□□□□□ -0.98
SDF2-208ENST00000589788 DNM1P34Q6PK57 102 aa8.94□□□□□ -0.98
SDF2-208ENST00000589788 ZBTB49Q6ZSB9 765 aa8.94□□□□□ -0.98
SDF2-208ENST00000589788 FOXL2NBQ6ZUU3 175 aa8.94□□□□□ -0.98
SDF2-208ENST00000589788 PTCHD4Q6ZW05 846 aa8.94□□□□□ -0.98
SDF2-208ENST00000589788 GLB1L2Q8IW92 636 aa8.94□□□□□ -0.98
SDF2-208ENST00000589788 HS3ST5Q8IZT8 346 aa8.94□□□□□ -0.98
SDF2-208ENST00000589788 CBR4Q8N4T8 237 aa8.94□□□□□ -0.98
SDF2-208ENST00000589788 OR10G2Q8NGC3 310 aa8.94□□□□□ -0.98
SDF2-208ENST00000589788 GIPC3Q8TF64 312 aa8.94□□□□□ -0.98
SDF2-208ENST00000589788 VRK1Q99986 396 aaPredicted RBP8.94□□□□□ -0.98
SDF2-208ENST00000589788 RBM4BQ9BQ04 359 aaKnown RBP8.94□□□□□ -0.98
SDF2-208ENST00000589788 RBM4Q9BWF3 364 aaKnown RBP8.94□□□□□ -0.98
SDF2-208ENST00000589788 VCXQ9H320 206 aa8.94□□□□□ -0.98
SDF2-208ENST00000589788 EGLN3Q9H6Z9 239 aa8.94□□□□□ -0.98
SDF2-208ENST00000589788 POLE4Q9NR33 117 aa8.94□□□□□ -0.98
SDF2-208ENST00000589788 DLL4Q9NR61 685 aa8.94□□□□□ -0.98
SDF2-208ENST00000589788 USE1Q9NZ43 259 aa8.94□□□□□ -0.98
SDF2-208ENST00000589788 VSX1Q9NZR4 365 aaPredicted RBP8.94□□□□□ -0.98
SDF2-208ENST00000589788 PDP1Q9P0J1 537 aaPredicted RBP8.94□□□□□ -0.98
SDF2-208ENST00000589788 TIMM10BQ9Y5J6 103 aa8.94□□□□□ -0.98
SDF2-208ENST00000589788 CDH10Q9Y6N8 788 aa8.94□□□□□ -0.98
SDF2-208ENST00000589788 ACANP16112 2415 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 CELSR1Q9NYQ6 3014 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 EI24O14681 340 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 IDH3BO43837 385 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 GPRIN2O60269 458 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 SNAP29O95721 258 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 GASTP01350 101 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 IGLV1-40P01703 118 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 ALPLP05186 524 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 ERCC1P07992 297 aaPredicted RBP8.93□□□□□ -0.98
SDF2-208ENST00000589788 INHBBP09529 407 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 CCL2P13500 99 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 ANXA8P13928 327 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 FSTP19883 344 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 CCNOP22674 350 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 STOMP27105 288 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 CRABP1P29762 137 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 GLRXP35754 106 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 CDKN2AP42771 156 aaKnown RBP8.93□□□□□ -0.98
SDF2-208ENST00000589788 RAD52P43351 418 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 GDI2P50395 445 aaKnown RBP8.93□□□□□ -0.98
SDF2-208ENST00000589788 ALDH3A2P51648 485 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 PSG4Q00888 419 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 TNK1Q13470 666 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 CLEC12AQ5QGZ9 265 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 FAHD1Q6P587 224 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 LEG1Q6P5S2 330 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 CLEC2AQ6UVW9 174 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 CPEB3Q8NE35 698 aaKnown RBP8.93□□□□□ -0.98
SDF2-208ENST00000589788 OR4K13Q8NH42 304 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 AKR7LQ8NHP1 331 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 DNAJC9Q8WXX5 260 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 FOXN4Q96NZ1 517 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 SLC29A1Q99808 456 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 WACQ9BTA9 647 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 ZNF416Q9BWM5 594 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 OR2H1Q9GZK4 316 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 NUAK2Q9H093 628 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 OR51B6Q9H340 312 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 DYNLRB1Q9NP97 96 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 EMC7Q9NPA0 242 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 TBC1D23Q9NUY8 699 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 COA3Q9Y2R0 106 aaPredicted RBP8.93□□□□□ -0.98
SDF2-208ENST00000589788 POLR1DQ9Y2S0 133 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 FKBP7Q9Y680 259 aa8.93□□□□□ -0.98
SDF2-208ENST00000589788 C5orf49A4QMS7 147 aa8.92□□□□□ -0.98
SDF2-208ENST00000589788 H0YJX3 145 aa8.92□□□□□ -0.98
SDF2-208ENST00000589788 SCG5P05408 212 aa8.92□□□□□ -0.98
SDF2-208ENST00000589788 LCKP06239 509 aa8.92□□□□□ -0.98
SDF2-208ENST00000589788 HIST1H1CP16403 213 aaKnown RBP8.92□□□□□ -0.98
SDF2-208ENST00000589788 PRKACGP22612 351 aa8.92□□□□□ -0.98
SDF2-208ENST00000589788 PCSK6P29122 969 aa8.92□□□□□ -0.98
SDF2-208ENST00000589788 PPOXP50336 477 aa8.92□□□□□ -0.98
SDF2-208ENST00000589788 EFNA4P52798 201 aa8.92□□□□□ -0.98
SDF2-208ENST00000589788 DSCR9P59020 149 aa8.92□□□□□ -0.98
SDF2-208ENST00000589788 SELENOVP59797 346 aa8.92□□□□□ -0.98
SDF2-208ENST00000589788 SUMO1P63165 101 aaKnown RBP8.92□□□□□ -0.98
SDF2-208ENST00000589788 SCRN3Q0VDG4 424 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms