RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 CASKO14936 926 aa13.2□□□□□ -0.3
ATG4D-211ENST00000589753 SYNGR3O43761 229 aa13.2□□□□□ -0.3
ATG4D-211ENST00000589753 IGLV1-44P01699 117 aa13.2□□□□□ -0.3
ATG4D-211ENST00000589753 IGHA1P01876 353 aa13.2□□□□□ -0.3
ATG4D-211ENST00000589753 SERPINA5P05154 406 aa13.2□□□□□ -0.3
ATG4D-211ENST00000589753 CELA3BP08861 270 aa13.2□□□□□ -0.3
ATG4D-211ENST00000589753 ZNF14P17017 642 aaPredicted RBP13.2□□□□□ -0.3
ATG4D-211ENST00000589753 DCKP27707 260 aa13.2□□□□□ -0.3
ATG4D-211ENST00000589753 ST3GAL4Q11206 333 aa13.2□□□□□ -0.3
ATG4D-211ENST00000589753 C3orf36Q3SXR2 165 aa13.2□□□□□ -0.3
ATG4D-211ENST00000589753 KCTD18Q6PI47 426 aaPredicted RBP13.2□□□□□ -0.3
ATG4D-211ENST00000589753 SPATC1Q76KD6 591 aa13.2□□□□□ -0.3
ATG4D-211ENST00000589753 ZNF584Q8IVC4 421 aa13.2□□□□□ -0.3
ATG4D-211ENST00000589753 STX19Q8N4C7 294 aa13.2□□□□□ -0.3
ATG4D-211ENST00000589753 RFLNBQ8N5W9 214 aa13.2□□□□□ -0.3
ATG4D-211ENST00000589753 CPEB3Q8NE35 698 aaKnown RBP13.2□□□□□ -0.3
ATG4D-211ENST00000589753 OR10S1Q8NGN2 331 aa13.2□□□□□ -0.3
ATG4D-211ENST00000589753 OR1F12Q8NHA8 337 aa13.2□□□□□ -0.3
ATG4D-211ENST00000589753 RNF133Q8WVZ7 376 aa13.2□□□□□ -0.3
ATG4D-211ENST00000589753 IPCEF1Q8WWN9 437 aaPredicted RBP13.2□□□□□ -0.3
ATG4D-211ENST00000589753 MYDGFQ969H8 173 aa13.2□□□□□ -0.3
ATG4D-211ENST00000589753 AMELYQ99218 206 aa13.2□□□□□ -0.3
ATG4D-211ENST00000589753 ATF6BQ99941 703 aa13.2□□□□□ -0.3
ATG4D-211ENST00000589753 COPS4Q9BT78 406 aa13.2□□□□□ -0.3
ATG4D-211ENST00000589753 TTTY10Q9BZA0 68 aa13.2□□□□□ -0.3
ATG4D-211ENST00000589753 PNRC2Q9NPJ4 139 aaKnown RBP13.2□□□□□ -0.3
ATG4D-211ENST00000589753 INPP5EQ9NRR6 644 aa13.2□□□□□ -0.3
ATG4D-211ENST00000589753 CENPMQ9NSP4 180 aa13.2□□□□□ -0.3
ATG4D-211ENST00000589753 FKBP14Q9NWM8 211 aa13.2□□□□□ -0.3
ATG4D-211ENST00000589753 CRIM1Q9NZV1 1036 aa13.2□□□□□ -0.3
ATG4D-211ENST00000589753 DIMT1Q9UNQ2 313 aaKnown RBP13.2□□□□□ -0.3
ATG4D-211ENST00000589753 CACNA1CQ13936 2221 aa13.2□□□□□ -0.3
ATG4D-211ENST00000589753 IGHV1-18A0A0C4DH31 117 aa13.19□□□□□ -0.3
ATG4D-211ENST00000589753 OR6C6A6NF89 314 aa13.19□□□□□ -0.3
ATG4D-211ENST00000589753 ZNF878C9JN71 531 aa13.19□□□□□ -0.3
ATG4D-211ENST00000589753 CECR9P0C854 216 aa13.19□□□□□ -0.3
ATG4D-211ENST00000589753 COX5BP10606 129 aa13.19□□□□□ -0.3
ATG4D-211ENST00000589753 EPXP11678 715 aa13.19□□□□□ -0.3
ATG4D-211ENST00000589753 CRYGSP22914 178 aa13.19□□□□□ -0.3
ATG4D-211ENST00000589753 STOMP27105 288 aa13.19□□□□□ -0.3
ATG4D-211ENST00000589753 APEX1P27695 318 aaKnown RBP13.19□□□□□ -0.3
ATG4D-211ENST00000589753 APLNRP35414 380 aa13.19□□□□□ -0.3
ATG4D-211ENST00000589753 HTR5AP47898 357 aa13.19□□□□□ -0.3
ATG4D-211ENST00000589753 SLC35A2P78381 396 aa13.19□□□□□ -0.3
ATG4D-211ENST00000589753 ZNF85Q03923 595 aa13.19□□□□□ -0.3
ATG4D-211ENST00000589753 ECH1Q13011 328 aa13.19□□□□□ -0.3
ATG4D-211ENST00000589753 TAF13Q15543 124 aa13.19□□□□□ -0.3
ATG4D-211ENST00000589753 ZNF322Q6U7Q0 402 aaPredicted RBP13.19□□□□□ -0.3
ATG4D-211ENST00000589753 MEX3BQ6ZN04 569 aaKnown RBP13.19□□□□□ -0.3
ATG4D-211ENST00000589753 RHOUQ7L0Q8 258 aa13.19□□□□□ -0.3
ATG4D-211ENST00000589753 SSX6Q7RTT6 188 aa13.19□□□□□ -0.3
ATG4D-211ENST00000589753 ACBD4Q8NC06 268 aa13.19□□□□□ -0.3
ATG4D-211ENST00000589753 SLC30A7Q8NEW0 376 aa13.19□□□□□ -0.3
ATG4D-211ENST00000589753 FAM222BQ8WU58 562 aa13.19□□□□□ -0.3
ATG4D-211ENST00000589753 MS4A3Q96HJ5 214 aa13.19□□□□□ -0.3
ATG4D-211ENST00000589753 COQ7Q99807 217 aa13.19□□□□□ -0.3
ATG4D-211ENST00000589753 JAM3Q9BX67 310 aa13.19□□□□□ -0.3
ATG4D-211ENST00000589753 YTHDF1Q9BYJ9 559 aaKnown RBP13.19□□□□□ -0.3
ATG4D-211ENST00000589753 DUSP21Q9H596 190 aa13.19□□□□□ -0.3
ATG4D-211ENST00000589753 SLC24A3Q9HC58 644 aa13.19□□□□□ -0.3
ATG4D-211ENST00000589753 DDX28Q9NUL7 540 aaKnown RBP13.19□□□□□ -0.3
ATG4D-211ENST00000589753 PAK1IP1Q9NWT1 392 aaPredicted RBP13.19□□□□□ -0.3
ATG4D-211ENST00000589753 ATPIF1Q9UII2 106 aa13.19□□□□□ -0.3
ATG4D-211ENST00000589753 CDK1P06493 297 aa13.18□□□□□ -0.3
ATG4D-211ENST00000589753 H2BFMP0C1H6 154 aa13.18□□□□□ -0.3
ATG4D-211ENST00000589753 MYL12AP19105 171 aa13.18□□□□□ -0.3
ATG4D-211ENST00000589753 EEF1B2P24534 225 aaKnown RBP13.18□□□□□ -0.3
ATG4D-211ENST00000589753 PTAFRP25105 342 aa13.18□□□□□ -0.3
ATG4D-211ENST00000589753 OPRL1P41146 370 aa13.18□□□□□ -0.3
ATG4D-211ENST00000589753 GDI2P50395 445 aaKnown RBP13.18□□□□□ -0.3
ATG4D-211ENST00000589753 EGR3Q06889 387 aa13.18□□□□□ -0.3
ATG4D-211ENST00000589753 TBC1D28Q2M2D7 210 aa13.18□□□□□ -0.3
ATG4D-211ENST00000589753 TMEM108Q6UXF1 575 aa13.18□□□□□ -0.3
ATG4D-211ENST00000589753 LRRN1Q6UXK5 716 aa13.18□□□□□ -0.3
ATG4D-211ENST00000589753 KRT77Q7Z794 578 aa13.18□□□□□ -0.3
ATG4D-211ENST00000589753 LHFPL3Q86UP9 236 aa13.18□□□□□ -0.3
ATG4D-211ENST00000589753 MYPOPQ86VE0 399 aaPredicted RBP13.18□□□□□ -0.3
ATG4D-211ENST00000589753 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.18□□□□□ -0.3
ATG4D-211ENST00000589753 OR1J2Q8NGS2 313 aa13.18□□□□□ -0.3
ATG4D-211ENST00000589753 SNX33Q8WV41 574 aa13.18□□□□□ -0.3
ATG4D-211ENST00000589753 MRPL48Q96GC5 212 aaKnown RBP13.18□□□□□ -0.3
ATG4D-211ENST00000589753 OR8B4Q96RC9 309 aa13.18□□□□□ -0.3
ATG4D-211ENST00000589753 MYCBPQ99417 103 aaPredicted RBP13.18□□□□□ -0.3
ATG4D-211ENST00000589753 SPOCK3Q9BQ16 436 aa13.18□□□□□ -0.3
ATG4D-211ENST00000589753 MROQ9BYG7 248 aa13.18□□□□□ -0.3
ATG4D-211ENST00000589753 CHCHD3Q9NX63 227 aaKnown RBP13.18□□□□□ -0.3
ATG4D-211ENST00000589753 ERVK13-1Q9NX77 482 aa13.18□□□□□ -0.3
ATG4D-211ENST00000589753 SLCO1C1Q9NYB5 712 aa13.18□□□□□ -0.3
ATG4D-211ENST00000589753 IKZF2Q9UKS7 526 aa13.18□□□□□ -0.3
ATG4D-211ENST00000589753 EXOSC1Q9Y3B2 195 aaKnown RBP13.18□□□□□ -0.3
ATG4D-211ENST00000589753 LOC100509620A0A075B734 347 aa13.17□□□□□ -0.3
ATG4D-211ENST00000589753 PRR32B1ATL7 298 aa13.17□□□□□ -0.3
ATG4D-211ENST00000589753 PSMD9O00233 223 aa13.17□□□□□ -0.3
ATG4D-211ENST00000589753 ADRA2AP08913 450 aa13.17□□□□□ -0.3
ATG4D-211ENST00000589753 CCL2P13500 99 aa13.17□□□□□ -0.3
ATG4D-211ENST00000589753 CD40P25942 277 aa13.17□□□□□ -0.3
ATG4D-211ENST00000589753 HSD11B1P28845 292 aa13.17□□□□□ -0.3
ATG4D-211ENST00000589753 C21orf33P30042 268 aaPredicted RBP13.17□□□□□ -0.3
ATG4D-211ENST00000589753 CHN2P52757 468 aa13.17□□□□□ -0.3
ATG4D-211ENST00000589753 GABARAPL2P60520 117 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms