RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 TFAP2CQ92754 450 aa16.98■□□□□ 0.31
CIRBP-220ENST00000588917 MS4A3Q96HJ5 214 aa16.98■□□□□ 0.31
CIRBP-220ENST00000588917 ZNF582Q96NG8 517 aaPredicted RBP16.98■□□□□ 0.31
CIRBP-220ENST00000588917 MNTQ99583 582 aa16.98■□□□□ 0.31
CIRBP-220ENST00000588917 CDH20Q9HBT6 801 aa16.98■□□□□ 0.31
CIRBP-220ENST00000588917 GDF2Q9UK05 429 aaPredicted RBP16.98■□□□□ 0.31
CIRBP-220ENST00000588917 POU2F3Q9UKI9 436 aa16.98■□□□□ 0.31
CIRBP-220ENST00000588917 EDARQ9UNE0 448 aa16.98■□□□□ 0.31
CIRBP-220ENST00000588917 CELA3BP08861 270 aa16.97■□□□□ 0.31
CIRBP-220ENST00000588917 ZNF35P13682 527 aa16.97■□□□□ 0.31
CIRBP-220ENST00000588917 APEX1P27695 318 aaKnown RBP16.97■□□□□ 0.31
CIRBP-220ENST00000588917 CCDC92Q53HC0 331 aaPredicted RBP16.97■□□□□ 0.31
CIRBP-220ENST00000588917 ZNF774Q6NX45 483 aa16.97■□□□□ 0.31
CIRBP-220ENST00000588917 VASH1Q7L8A9 365 aaPredicted RBP16.97■□□□□ 0.31
CIRBP-220ENST00000588917 DPY19L4Q7Z388 723 aa16.97■□□□□ 0.31
CIRBP-220ENST00000588917 BCDIN3DQ7Z5W3 292 aaKnown RBP16.97■□□□□ 0.31
CIRBP-220ENST00000588917 LINC00346Q8IVM7 164 aa16.97■□□□□ 0.31
CIRBP-220ENST00000588917 C8orf59Q8N0T1 100 aaPredicted RBP16.97■□□□□ 0.31
CIRBP-220ENST00000588917 OR1F12Q8NHA8 337 aa16.97■□□□□ 0.31
CIRBP-220ENST00000588917 DCLRE1CQ96SD1 692 aaKnown RBP16.97■□□□□ 0.31
CIRBP-220ENST00000588917 CNN2Q99439 309 aaKnown RBP16.97■□□□□ 0.31
CIRBP-220ENST00000588917 COQ7Q99807 217 aa16.97■□□□□ 0.31
CIRBP-220ENST00000588917 EIF3KQ9UBQ5 218 aaKnown RBP16.97■□□□□ 0.31
CIRBP-220ENST00000588917 CCDC168Q8NDH2 2452 aa16.96■□□□□ 0.31
CIRBP-220ENST00000588917 ANKHD1Q8IWZ3 2542 aaKnown RBP16.96■□□□□ 0.31
CIRBP-220ENST00000588917 IGHV2OR16-5A0A0B4J2B6 119 aa16.96■□□□□ 0.31
CIRBP-220ENST00000588917 CCDC182A6NF36 153 aa16.96■□□□□ 0.31
CIRBP-220ENST00000588917 OR6C6A6NF89 314 aa16.96■□□□□ 0.31
CIRBP-220ENST00000588917 SYNGR3O43761 229 aa16.96■□□□□ 0.31
CIRBP-220ENST00000588917 ENTPD6O75354 484 aa16.96■□□□□ 0.31
CIRBP-220ENST00000588917 GABRB1P18505 474 aa16.96■□□□□ 0.31
CIRBP-220ENST00000588917 PCSK6P29122 969 aa16.96■□□□□ 0.31
CIRBP-220ENST00000588917 RAD52P43351 418 aa16.96■□□□□ 0.31
CIRBP-220ENST00000588917 SLC15A1P46059 708 aa16.96■□□□□ 0.31
CIRBP-220ENST00000588917 HTR5AP47898 357 aa16.96■□□□□ 0.31
CIRBP-220ENST00000588917 AQP4P55087 323 aa16.96■□□□□ 0.31
CIRBP-220ENST00000588917 EIF2B1Q14232 305 aaKnown RBP16.96■□□□□ 0.31
CIRBP-220ENST00000588917 OTPQ5XKR4 325 aa16.96■□□□□ 0.31
CIRBP-220ENST00000588917 CORO6Q6QEF8 472 aa16.96■□□□□ 0.31
CIRBP-220ENST00000588917 LYPD4Q6UWN0 246 aa16.96■□□□□ 0.31
CIRBP-220ENST00000588917 DCXRQ7Z4W1 244 aa16.96■□□□□ 0.31
CIRBP-220ENST00000588917 CDC20BQ86Y33 519 aa16.96■□□□□ 0.31
CIRBP-220ENST00000588917 OTOSQ8NHW6 89 aa16.96■□□□□ 0.31
CIRBP-220ENST00000588917 POM121L2Q96KW2 1035 aa16.96■□□□□ 0.31
CIRBP-220ENST00000588917 HS3ST6Q96QI5 342 aa16.96■□□□□ 0.31
CIRBP-220ENST00000588917 DNAJC27Q9NZQ0 273 aa16.96■□□□□ 0.31
CIRBP-220ENST00000588917 LAMP5Q9UJQ1 280 aa16.96■□□□□ 0.31
CIRBP-220ENST00000588917 PCDHGB1Q9Y5G3 927 aa16.96■□□□□ 0.31
CIRBP-220ENST00000588917 F8P00451 2351 aa16.95■□□□□ 0.3
CIRBP-220ENST00000588917 C5orf49A4QMS7 147 aa16.95■□□□□ 0.3
CIRBP-220ENST00000588917 PHYHO14832 338 aa16.95■□□□□ 0.3
CIRBP-220ENST00000588917 LYNP07948 512 aa16.95■□□□□ 0.3
CIRBP-220ENST00000588917 CCNOP22674 350 aa16.95■□□□□ 0.3
CIRBP-220ENST00000588917 MTNR1AP48039 350 aa16.95■□□□□ 0.3
CIRBP-220ENST00000588917 ISL1P61371 349 aa16.95■□□□□ 0.3
CIRBP-220ENST00000588917 MAD2L1BPQ15013 274 aaPredicted RBP16.95■□□□□ 0.3
CIRBP-220ENST00000588917 TAF13Q15543 124 aa16.95■□□□□ 0.3
CIRBP-220ENST00000588917 SNCBQ16143 134 aa16.95■□□□□ 0.3
CIRBP-220ENST00000588917 ZNF672Q499Z4 452 aaPredicted RBP16.95■□□□□ 0.3
CIRBP-220ENST00000588917 KCTD18Q6PI47 426 aaPredicted RBP16.95■□□□□ 0.3
CIRBP-220ENST00000588917 IZUMO2Q6UXV1 221 aa16.95■□□□□ 0.3
CIRBP-220ENST00000588917 B3GLCTQ6Y288 498 aa16.95■□□□□ 0.3
CIRBP-220ENST00000588917 THEM6Q8WUY1 208 aa16.95■□□□□ 0.3
CIRBP-220ENST00000588917 SPTSSAQ969W0 71 aa16.95■□□□□ 0.3
CIRBP-220ENST00000588917 ATF6BQ99941 703 aa16.95■□□□□ 0.3
CIRBP-220ENST00000588917 ELOVL3Q9HB03 270 aa16.95■□□□□ 0.3
CIRBP-220ENST00000588917 CISD1Q9NZ45 108 aaKnown RBP16.95■□□□□ 0.3
CIRBP-220ENST00000588917 RPL36Q9Y3U8 105 aaKnown RBP16.95■□□□□ 0.3
CIRBP-220ENST00000588917 ATP23Q9Y6H3 246 aa16.95■□□□□ 0.3
CIRBP-220ENST00000588917 SHISA9B4DS77 424 aa16.94■□□□□ 0.3
CIRBP-220ENST00000588917 SELENOFO60613 162 aa16.94■□□□□ 0.3
CIRBP-220ENST00000588917 APOC1P02654 83 aa16.94■□□□□ 0.3
CIRBP-220ENST00000588917 SBK2P0C263 348 aa16.94■□□□□ 0.3
CIRBP-220ENST00000588917 NR4A1P22736 598 aa16.94■□□□□ 0.3
CIRBP-220ENST00000588917 TUBG1P23258 451 aa16.94■□□□□ 0.3
CIRBP-220ENST00000588917 CALCRP30988 508 aa16.94■□□□□ 0.3
CIRBP-220ENST00000588917 NAA10P41227 235 aaPredicted RBP16.94■□□□□ 0.3
CIRBP-220ENST00000588917 RPS27P42677 84 aaKnown RBP16.94■□□□□ 0.3
CIRBP-220ENST00000588917 RIPPLY3P57055 190 aa16.94■□□□□ 0.3
CIRBP-220ENST00000588917 TMEM154Q6P9G4 183 aa16.94■□□□□ 0.3
CIRBP-220ENST00000588917 CFAP77Q6ZQR2 320 aa16.94■□□□□ 0.3
CIRBP-220ENST00000588917 THAP5Q7Z6K1 395 aa16.94■□□□□ 0.3
CIRBP-220ENST00000588917 MYPOPQ86VE0 399 aaPredicted RBP16.94■□□□□ 0.3
CIRBP-220ENST00000588917 NUP37Q8NFH4 326 aa16.94■□□□□ 0.3
CIRBP-220ENST00000588917 ASB17Q8WXJ9 295 aa16.94■□□□□ 0.3
CIRBP-220ENST00000588917 AKAP1Q92667 903 aaKnown RBP eCLIP16.94■□□□□ 0.3
CIRBP-220ENST00000588917 SLAMF6Q96DU3 332 aa16.94■□□□□ 0.3
CIRBP-220ENST00000588917 MAP6Q96JE9 813 aa16.94■□□□□ 0.3
CIRBP-220ENST00000588917 MYCBPQ99417 103 aaPredicted RBP16.94■□□□□ 0.3
CIRBP-220ENST00000588917 ABHD6Q9BV23 337 aa16.94■□□□□ 0.3
CIRBP-220ENST00000588917 BCL2L14Q9BZR8 327 aa16.94■□□□□ 0.3
CIRBP-220ENST00000588917 TUBG2Q9NRH3 451 aa16.94■□□□□ 0.3
CIRBP-220ENST00000588917 CENPMQ9NSP4 180 aa16.94■□□□□ 0.3
CIRBP-220ENST00000588917 FAIMQ9NVQ4 179 aa16.94■□□□□ 0.3
CIRBP-220ENST00000588917 CELSR1Q9NYQ6 3014 aa16.94■□□□□ 0.3
CIRBP-220ENST00000588917 LOC100509620A0A075B734 347 aa16.93■□□□□ 0.3
CIRBP-220ENST00000588917 ZNF878C9JN71 531 aa16.93■□□□□ 0.3
CIRBP-220ENST00000588917 ATP6V1G2-DDX39BF2Z307 99 aa16.93■□□□□ 0.3
CIRBP-220ENST00000588917 CLIC3O95833 236 aa16.93■□□□□ 0.3
CIRBP-220ENST00000588917 PLAUP00749 431 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms