RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 IL5RAQ01344 420 aa16.42■□□□□ 0.22
CLPTM1-209ENST00000588855 OCLNQ16625 522 aa16.42■□□□□ 0.22
CLPTM1-209ENST00000588855 TBC1D28Q2M2D7 210 aa16.42■□□□□ 0.22
CLPTM1-209ENST00000588855 ELFN2Q5R3F8 820 aa16.42■□□□□ 0.22
CLPTM1-209ENST00000588855 SLC25A30Q5SVS4 291 aa16.42■□□□□ 0.22
CLPTM1-209ENST00000588855 OR10S1Q8NGN2 331 aa16.42■□□□□ 0.22
CLPTM1-209ENST00000588855 RHOXF1Q8NHV9 184 aa16.42■□□□□ 0.22
CLPTM1-209ENST00000588855 SLC7A6Q92536 515 aa16.42■□□□□ 0.22
CLPTM1-209ENST00000588855 POM121L2Q96KW2 1035 aa16.42■□□□□ 0.22
CLPTM1-209ENST00000588855 PNRC2Q9NPJ4 139 aaKnown RBP16.42■□□□□ 0.22
CLPTM1-209ENST00000588855 POU2F3Q9UKI9 436 aa16.42■□□□□ 0.22
CLPTM1-209ENST00000588855 AKAP6Q13023 2319 aa16.41■□□□□ 0.22
CLPTM1-209ENST00000588855 OR6C6A6NF89 314 aa16.41■□□□□ 0.22
CLPTM1-209ENST00000588855 MPZL2O60487 215 aa16.41■□□□□ 0.22
CLPTM1-209ENST00000588855 TMCC2O75069 709 aa16.41■□□□□ 0.22
CLPTM1-209ENST00000588855 GNAO1P09471 354 aa16.41■□□□□ 0.22
CLPTM1-209ENST00000588855 COX5BP10606 129 aa16.41■□□□□ 0.22
CLPTM1-209ENST00000588855 CCNOP22674 350 aa16.41■□□□□ 0.22
CLPTM1-209ENST00000588855 HGFACQ04756 655 aa16.41■□□□□ 0.22
CLPTM1-209ENST00000588855 EIF2B1Q14232 305 aaKnown RBP16.41■□□□□ 0.22
CLPTM1-209ENST00000588855 MAD2L1BPQ15013 274 aaPredicted RBP16.41■□□□□ 0.22
CLPTM1-209ENST00000588855 ZNF672Q499Z4 452 aaPredicted RBP16.41■□□□□ 0.22
CLPTM1-209ENST00000588855 IZUMO2Q6UXV1 221 aa16.41■□□□□ 0.22
CLPTM1-209ENST00000588855 OR1F12Q8NHA8 337 aa16.41■□□□□ 0.22
CLPTM1-209ENST00000588855 ST7LQ8TDW4 575 aa16.41■□□□□ 0.22
CLPTM1-209ENST00000588855 APH1BQ8WW43 257 aa16.41■□□□□ 0.22
CLPTM1-209ENST00000588855 AKAP1Q92667 903 aaKnown RBP eCLIP16.41■□□□□ 0.22
CLPTM1-209ENST00000588855 CNN2Q99439 309 aaKnown RBP16.41■□□□□ 0.22
CLPTM1-209ENST00000588855 HDHD2Q9H0R4 259 aa16.41■□□□□ 0.22
CLPTM1-209ENST00000588855 PLEKHF2Q9H8W4 249 aa16.41■□□□□ 0.22
CLPTM1-209ENST00000588855 CDH20Q9HBT6 801 aa16.41■□□□□ 0.22
CLPTM1-209ENST00000588855 ADGRL4Q9HBW9 690 aa16.41■□□□□ 0.22
CLPTM1-209ENST00000588855 WARS2Q9UGM6 360 aaKnown RBP16.41■□□□□ 0.22
CLPTM1-209ENST00000588855 ATP23Q9Y6H3 246 aa16.41■□□□□ 0.22
CLPTM1-209ENST00000588855 C5orf49A4QMS7 147 aa16.4■□□□□ 0.22
CLPTM1-209ENST00000588855 GDI2P50395 445 aaKnown RBP16.4■□□□□ 0.22
CLPTM1-209ENST00000588855 C6orf52Q5T4I8 152 aa16.4■□□□□ 0.22
CLPTM1-209ENST00000588855 MEDAGQ5VYS4 303 aa16.4■□□□□ 0.22
CLPTM1-209ENST00000588855 KRT80Q6KB66 452 aa16.4■□□□□ 0.22
CLPTM1-209ENST00000588855 SHFQ7M4L6 423 aa16.4■□□□□ 0.22
CLPTM1-209ENST00000588855 SLC16A9Q7RTY1 509 aa16.4■□□□□ 0.22
CLPTM1-209ENST00000588855 OR1J2Q8NGS2 313 aa16.4■□□□□ 0.22
CLPTM1-209ENST00000588855 OTOSQ8NHW6 89 aa16.4■□□□□ 0.22
CLPTM1-209ENST00000588855 TFAP2CQ92754 450 aa16.4■□□□□ 0.22
CLPTM1-209ENST00000588855 RFKQ969G6 155 aa16.4■□□□□ 0.22
CLPTM1-209ENST00000588855 AMELYQ99218 206 aa16.4■□□□□ 0.22
CLPTM1-209ENST00000588855 UBTD1Q9HAC8 227 aa16.4■□□□□ 0.22
CLPTM1-209ENST00000588855 HAO2Q9NYQ3 351 aa16.4■□□□□ 0.22
CLPTM1-209ENST00000588855 KLHDC2Q9Y2U9 406 aa16.4■□□□□ 0.22
CLPTM1-209ENST00000588855 CSMD2Q7Z408 3487 aa16.4■□□□□ 0.22
CLPTM1-209ENST00000588855 E7EQL1 145 aa16.4■□□□□ 0.22
CLPTM1-209ENST00000588855 APOL3O95236 402 aa16.4■□□□□ 0.22
CLPTM1-209ENST00000588855 DBHP09172 617 aa16.4■□□□□ 0.22
CLPTM1-209ENST00000588855 VHLP40337 213 aa16.4■□□□□ 0.22
CLPTM1-209ENST00000588855 HCCSP53701 268 aa16.4■□□□□ 0.22
CLPTM1-209ENST00000588855 SNTB2Q13425 540 aaKnown RBP16.4■□□□□ 0.22
CLPTM1-209ENST00000588855 IL18R1Q13478 541 aa16.4■□□□□ 0.22
CLPTM1-209ENST00000588855 SETD9Q8NE22 299 aa16.4■□□□□ 0.22
CLPTM1-209ENST00000588855 OR51G2Q8NGK0 314 aa16.4■□□□□ 0.22
CLPTM1-209ENST00000588855 NRGNQ92686 78 aa16.4■□□□□ 0.22
CLPTM1-209ENST00000588855 SLAMF6Q96DU3 332 aa16.4■□□□□ 0.22
CLPTM1-209ENST00000588855 COQ7Q99807 217 aa16.4■□□□□ 0.22
CLPTM1-209ENST00000588855 ATF6BQ99941 703 aa16.4■□□□□ 0.22
CLPTM1-209ENST00000588855 ABHD6Q9BV23 337 aa16.4■□□□□ 0.22
CLPTM1-209ENST00000588855 OR51B6Q9H340 312 aa16.4■□□□□ 0.22
CLPTM1-209ENST00000588855 ATPIF1Q9UII2 106 aa16.4■□□□□ 0.22
CLPTM1-209ENST00000588855 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.4■□□□□ 0.22
CLPTM1-209ENST00000588855 POLQO75417 2590 aa16.39■□□□□ 0.21
CLPTM1-209ENST00000588855 HS3ST1O14792 307 aa16.39■□□□□ 0.21
CLPTM1-209ENST00000588855 WBP4O75554 376 aaKnown RBP16.39■□□□□ 0.21
CLPTM1-209ENST00000588855 WNT5AP41221 380 aa16.39■□□□□ 0.21
CLPTM1-209ENST00000588855 NUDT6P53370 316 aa16.39■□□□□ 0.21
CLPTM1-209ENST00000588855 NKX6-1P78426 367 aaPredicted RBP16.39■□□□□ 0.21
CLPTM1-209ENST00000588855 GALK2Q01415 458 aa16.39■□□□□ 0.21
CLPTM1-209ENST00000588855 USP51Q70EK9 711 aa16.39■□□□□ 0.21
CLPTM1-209ENST00000588855 SPATC1Q76KD6 591 aa16.39■□□□□ 0.21
CLPTM1-209ENST00000588855 OR4F15Q8NGB8 312 aa16.39■□□□□ 0.21
CLPTM1-209ENST00000588855 CNIH3Q8TBE1 160 aa16.39■□□□□ 0.21
CLPTM1-209ENST00000588855 YIPF3Q9GZM5 350 aa16.39■□□□□ 0.21
CLPTM1-209ENST00000588855 CLN6Q9NWW5 311 aa16.39■□□□□ 0.21
CLPTM1-209ENST00000588855 CISD1Q9NZ45 108 aaKnown RBP16.39■□□□□ 0.21
CLPTM1-209ENST00000588855 COPS3Q9UNS2 423 aa16.39■□□□□ 0.21
CLPTM1-209ENST00000588855 SPG11Q96JI7 2443 aa16.38■□□□□ 0.21
CLPTM1-209ENST00000588855 LYNP07948 512 aa16.38■□□□□ 0.21
CLPTM1-209ENST00000588855 SBK2P0C263 348 aa16.38■□□□□ 0.21
CLPTM1-209ENST00000588855 FAM157BP0CG42 384 aa16.38■□□□□ 0.21
CLPTM1-209ENST00000588855 NR4A1P22736 598 aa16.38■□□□□ 0.21
CLPTM1-209ENST00000588855 ISL1P61371 349 aa16.38■□□□□ 0.21
CLPTM1-209ENST00000588855 TMED1Q13445 227 aa16.38■□□□□ 0.21
CLPTM1-209ENST00000588855 RSPO1Q2MKA7 263 aaPredicted RBP16.38■□□□□ 0.21
CLPTM1-209ENST00000588855 VHLLQ6RSH7 139 aa16.38■□□□□ 0.21
CLPTM1-209ENST00000588855 SLC35F2Q8IXU6 374 aa16.38■□□□□ 0.21
CLPTM1-209ENST00000588855 C8orf59Q8N0T1 100 aaPredicted RBP16.38■□□□□ 0.21
CLPTM1-209ENST00000588855 RFLNBQ8N5W9 214 aa16.38■□□□□ 0.21
CLPTM1-209ENST00000588855 ZNF454Q8N9F8 522 aa16.38■□□□□ 0.21
CLPTM1-209ENST00000588855 NUP37Q8NFH4 326 aa16.38■□□□□ 0.21
CLPTM1-209ENST00000588855 THEM6Q8WUY1 208 aa16.38■□□□□ 0.21
CLPTM1-209ENST00000588855 FBXW5Q969U6 566 aa16.38■□□□□ 0.21
CLPTM1-209ENST00000588855 CENPMQ9NSP4 180 aa16.38■□□□□ 0.21
CLPTM1-209ENST00000588855 DDX28Q9NUL7 540 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms