RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 POLR1DQ9Y2S0 133 aa13.06□□□□□ -0.32
NFIX-208ENST00000587260 METTL15A6NJ78 407 aa13.05□□□□□ -0.32
NFIX-208ENST00000587260 J3QLW9 94 aa13.05□□□□□ -0.32
NFIX-208ENST00000587260 ZNF254O75437 659 aa13.05□□□□□ -0.32
NFIX-208ENST00000587260 FARS2O95363 451 aaKnown RBP13.05□□□□□ -0.32
NFIX-208ENST00000587260 TACSTD2P09758 323 aa13.05□□□□□ -0.32
NFIX-208ENST00000587260 ZNF19P17023 458 aa13.05□□□□□ -0.32
NFIX-208ENST00000587260 IL32P24001 234 aa13.05□□□□□ -0.32
NFIX-208ENST00000587260 PSMB9P28065 219 aa13.05□□□□□ -0.32
NFIX-208ENST00000587260 FAM27E3Q08E93 113 aa13.05□□□□□ -0.32
NFIX-208ENST00000587260 GPR50Q13585 617 aa13.05□□□□□ -0.32
NFIX-208ENST00000587260 TPBGQ13641 420 aa13.05□□□□□ -0.32
NFIX-208ENST00000587260 P2RY6Q15077 328 aa13.05□□□□□ -0.32
NFIX-208ENST00000587260 CCDC58Q4VC31 144 aa13.05□□□□□ -0.32
NFIX-208ENST00000587260 SFRP5Q5T4F7 317 aa13.05□□□□□ -0.32
NFIX-208ENST00000587260 STAC2Q6ZMT1 411 aa13.05□□□□□ -0.32
NFIX-208ENST00000587260 LINC00346Q8IVM7 164 aa13.05□□□□□ -0.32
NFIX-208ENST00000587260 GJC3Q8NFK1 279 aa13.05□□□□□ -0.32
NFIX-208ENST00000587260 LILRB4Q8NHJ6 448 aa13.05□□□□□ -0.32
NFIX-208ENST00000587260 MROQ9BYG7 248 aa13.05□□□□□ -0.32
NFIX-208ENST00000587260 TRIM36Q9NQ86 728 aa13.05□□□□□ -0.32
NFIX-208ENST00000587260 NDUFA13Q9P0J0 144 aa13.05□□□□□ -0.32
NFIX-208ENST00000587260 SMIM31A0A1B0GVY4 71 aa13.04□□□□□ -0.32
NFIX-208ENST00000587260 A0A1W2PR80 420 aa13.04□□□□□ -0.32
NFIX-208ENST00000587260 AGFG2O95081 481 aa13.04□□□□□ -0.32
NFIX-208ENST00000587260 LALBAP00709 142 aa13.04□□□□□ -0.32
NFIX-208ENST00000587260 KRT8P05787 483 aa13.04□□□□□ -0.32
NFIX-208ENST00000587260 CCKARP32238 428 aa13.04□□□□□ -0.32
NFIX-208ENST00000587260 DCTDP32321 178 aa13.04□□□□□ -0.32
NFIX-208ENST00000587260 LIPAP38571 399 aa13.04□□□□□ -0.32
NFIX-208ENST00000587260 OPRL1P41146 370 aa13.04□□□□□ -0.32
NFIX-208ENST00000587260 TAS2R43P59537 309 aa13.04□□□□□ -0.32
NFIX-208ENST00000587260 PCBD1P61457 104 aa13.04□□□□□ -0.32
NFIX-208ENST00000587260 TUBA1BP68363 451 aa13.04□□□□□ -0.32
NFIX-208ENST00000587260 TGFBR3Q03167 851 aa13.04□□□□□ -0.32
NFIX-208ENST00000587260 TP53I3Q53FA7 332 aa13.04□□□□□ -0.32
NFIX-208ENST00000587260 ANKRD16Q6P6B7 361 aa13.04□□□□□ -0.32
NFIX-208ENST00000587260 CORO6Q6QEF8 472 aa13.04□□□□□ -0.32
NFIX-208ENST00000587260 TUBA1AQ71U36 451 aa13.04□□□□□ -0.32
NFIX-208ENST00000587260 BHLHA15Q7RTS1 189 aaPredicted RBP13.04□□□□□ -0.32
NFIX-208ENST00000587260 DPPA2Q7Z7J5 298 aa13.04□□□□□ -0.32
NFIX-208ENST00000587260 SKA3Q8IX90 412 aa13.04□□□□□ -0.32
NFIX-208ENST00000587260 OR10S1Q8NGN2 331 aa13.04□□□□□ -0.32
NFIX-208ENST00000587260 BCL2L2Q92843 193 aaPredicted RBP13.04□□□□□ -0.32
NFIX-208ENST00000587260 RNF166Q96A37 237 aaPredicted RBP13.04□□□□□ -0.32
NFIX-208ENST00000587260 YIPF6Q96EC8 236 aa13.04□□□□□ -0.32
NFIX-208ENST00000587260 FBXO17Q96EF6 278 aa13.04□□□□□ -0.32
NFIX-208ENST00000587260 PELI1Q96FA3 418 aa13.04□□□□□ -0.32
NFIX-208ENST00000587260 PNRC2Q9NPJ4 139 aaKnown RBP13.04□□□□□ -0.32
NFIX-208ENST00000587260 SLCO1C1Q9NYB5 712 aa13.04□□□□□ -0.32
NFIX-208ENST00000587260 UBR5O95071 2799 aaPredicted RBP13.04□□□□□ -0.32
NFIX-208ENST00000587260 MAGEB4O15481 346 aaPredicted RBP13.03□□□□□ -0.32
NFIX-208ENST00000587260 PATE4P0C8F1 98 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 HSMCR30P0CW71 290 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 RNF224P0DH78 156 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 CPEP16870 476 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 HOXC12P31275 282 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 TGM4P49221 684 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 RGS6P49758 472 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 GBX2P52951 348 aaPredicted RBP13.03□□□□□ -0.32
NFIX-208ENST00000587260 SCRN3Q0VDG4 424 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 GABRA6Q16445 453 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 TBRG1Q3YBR2 411 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 LIPNQ5VXI9 398 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 FDX2Q6P4F2 183 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 CFAP77Q6ZQR2 320 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 FAM220AQ7Z4H9 259 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 KLBQ86Z14 1044 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 ZNF808Q8N4W9 903 aaPredicted RBP13.03□□□□□ -0.32
NFIX-208ENST00000587260 C1orf162Q8NEQ5 155 aaPredicted RBP13.03□□□□□ -0.32
NFIX-208ENST00000587260 SLAMF6Q96DU3 332 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 TTTY10Q9BZA0 68 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 ELOVL3Q9HB03 270 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 DDX28Q9NUL7 540 aaKnown RBP13.03□□□□□ -0.32
NFIX-208ENST00000587260 ELOVL5Q9NYP7 299 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 GNG8Q9UK08 70 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 CACNA1CQ13936 2221 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 ZNF503-AS2A6NEH8 195 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 J3QKU1 62 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 CCRL2O00421 344 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 RER1O15258 196 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 OGG1O15527 345 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 CLDN14O95500 239 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 WNT11O96014 354 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 HLA-HP01893 362 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 CD1AP06126 327 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 MMP7P09237 267 aaPredicted RBP13.03□□□□□ -0.32
NFIX-208ENST00000587260 HOXB1P14653 301 aaPredicted RBP13.03□□□□□ -0.32
NFIX-208ENST00000587260 PSMB1P20618 241 aaKnown RBP13.03□□□□□ -0.32
NFIX-208ENST00000587260 GRNP28799 593 aaKnown RBP13.03□□□□□ -0.32
NFIX-208ENST00000587260 SLC16A14Q7RTX9 510 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 KRT77Q7Z794 578 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 CCDC36Q8IYA8 594 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 RPS4Y2Q8TD47 263 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 S100PBPQ96BU1 408 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 ACTR6Q9GZN1 396 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 RBM38Q9H0Z9 239 aaKnown RBP13.03□□□□□ -0.32
NFIX-208ENST00000587260 KCNN2Q9H2S1 579 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 NIPAL2Q9H841 368 aa13.03□□□□□ -0.32
NFIX-208ENST00000587260 KCNJ16Q9NPI9 418 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms