RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 GBX2P52951 348 aaPredicted RBP6.89□□□□□ -1.31
VMP1-204ENST00000587259 ATP5J2P56134 94 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 VBP1P61758 197 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 CSNK2A1P68400 391 aaPredicted RBP6.89□□□□□ -1.31
VMP1-204ENST00000587259 SLC35A1P78382 337 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 RUNX1T1Q06455 604 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 AQP6Q13520 282 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 SPCS2Q15005 226 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 ZNF239Q16600 458 aaKnown RBP6.89□□□□□ -1.31
VMP1-204ENST00000587259 ZNF829Q3KNS6 432 aaPredicted RBP6.89□□□□□ -1.31
VMP1-204ENST00000587259 ZNF404Q494X3 552 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 CCDC58Q4VC31 144 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 ZNF362Q5T0B9 420 aaPredicted RBP6.89□□□□□ -1.31
VMP1-204ENST00000587259 RAET1LQ5VY80 246 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 ZNF544Q6NX49 715 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 ZNF704Q6ZNC4 412 aaPredicted RBP6.89□□□□□ -1.31
VMP1-204ENST00000587259 PLEKHG7Q6ZR37 379 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 SLC16A9Q7RTY1 509 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 PXKQ7Z7A4 578 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 IGFN1Q86VF2 1251 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 LSRQ86X29 649 aaPredicted RBP6.89□□□□□ -1.31
VMP1-204ENST00000587259 WFDC8Q8IUA0 241 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 SLC35F2Q8IXU6 374 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 MS4A15Q8N5U1 240 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 CYB561A3Q8NBI2 242 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 ATP6V1C2Q8NEY4 427 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 BBS1Q8NFJ9 593 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 OR4F15Q8NGB8 312 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 OR6K6Q8NGW6 343 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 ZNF417Q8TAU3 575 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 PTP4A1Q93096 173 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 BORCS5Q969J3 196 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 SLC25A36Q96CQ1 311 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 RASD2Q96D21 266 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 PLPPR2Q96GM1 343 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 Q96M85 177 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 KCTD7Q96MP8 289 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 TSPAN32Q96QS1 320 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 ZNF587Q96SQ5 575 aaPredicted RBP6.89□□□□□ -1.31
VMP1-204ENST00000587259 NMNAT3Q96T66 252 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 KLHDC3Q9BQ90 382 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 CHCHD6Q9BRQ6 235 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 ALG12Q9BV10 488 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 KRTAP4-6Q9BYQ5 205 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 PLGRKTQ9HBL7 147 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 EXOSC4Q9NPD3 245 aaKnown RBP6.89□□□□□ -1.31
VMP1-204ENST00000587259 RPRD1BQ9NQG5 326 aaKnown RBP6.89□□□□□ -1.31
VMP1-204ENST00000587259 BABAM2Q9NXR7 383 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 VSX1Q9NZR4 365 aaPredicted RBP6.89□□□□□ -1.31
VMP1-204ENST00000587259 CRNNQ9UBG3 495 aaPredicted RBP6.89□□□□□ -1.31
VMP1-204ENST00000587259 CLEC2DQ9UHP7 191 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 LAMP3Q9UQV4 416 aa6.89□□□□□ -1.31
VMP1-204ENST00000587259 CHD3Q12873 2000 aaKnown RBP6.88□□□□□ -1.31
VMP1-204ENST00000587259 LOC102725191A0A1B0GVB3 256 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 TRDV1A0A1B0GX56 115 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 ZC3H12DA2A288 527 aaKnown RBP6.88□□□□□ -1.31
VMP1-204ENST00000587259 OR2M5A3KFT3 312 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 PRSS37A4D1T9 235 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 OR6C68A6NDL8 312 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 LIPT2A6NK58 231 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 VGLL3A8MV65 326 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 CLDN25C9JDP6 229 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 LRRN3E7EW58 273 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 GPRIN2O60269 458 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 TMEM127O75204 238 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 F13BP05160 661 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 ACVR1BP36896 505 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 CDKN1AP38936 164 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 NCS1P62166 190 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 GLO1Q04760 184 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 EGR3Q06889 387 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 ZNF846Q147U1 533 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 OR7A5Q15622 319 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 SSX1Q16384 188 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 CLEC12BQ2HXU8 276 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 CDONQ4KMG0 1287 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 MESTQ5EB52 335 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 OR2G6Q5TZ20 316 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 EEF1A1P5Q5VTE0 462 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 LIPKQ5VXJ0 399 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 CD200R1LQ6Q8B3 271 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 C20orf204Q6ZNR8 217 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 CHMP1BQ7LBR1 199 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 LHFPL3Q86UP9 236 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 ZNF485Q8NCK3 441 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 LILRB1Q8NHL6 650 aaPredicted RBP6.88□□□□□ -1.31
VMP1-204ENST00000587259 MCFD2Q8NI22 146 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 ZNF519Q8TB69 540 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 NDNFQ8TB73 568 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 SNX33Q8WV41 574 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 SPRYD4Q8WW59 207 aaPredicted RBP6.88□□□□□ -1.31
VMP1-204ENST00000587259 GATAD2BQ8WXI9 593 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 ASB17Q8WXJ9 295 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 PHYHIPQ92561 330 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 ADAD1Q96M93 576 aaKnown RBP6.88□□□□□ -1.31
VMP1-204ENST00000587259 KLHL15Q96M94 604 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 DDOQ99489 341 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 NAA11Q9BSU3 229 aaPredicted RBP6.88□□□□□ -1.31
VMP1-204ENST00000587259 MED20Q9H944 212 aa6.88□□□□□ -1.31
VMP1-204ENST00000587259 RNF122Q9H9V4 155 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms