RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 SYNGR3O43761 229 aa11.83□□□□□ -0.52
VMP1-203ENST00000586245 FAM20BO75063 409 aa11.83□□□□□ -0.52
VMP1-203ENST00000586245 FADS2O95864 444 aaKnown RBP11.83□□□□□ -0.52
VMP1-203ENST00000586245 CD3EP07766 207 aa11.83□□□□□ -0.52
VMP1-203ENST00000586245 CELA3BP08861 270 aa11.83□□□□□ -0.52
VMP1-203ENST00000586245 OR2T7P0C7T2 308 aa11.83□□□□□ -0.52
VMP1-203ENST00000586245 APEX1P27695 318 aaKnown RBP11.83□□□□□ -0.52
VMP1-203ENST00000586245 HCCSP53701 268 aa11.83□□□□□ -0.52
VMP1-203ENST00000586245 BSPH1Q075Z2 132 aa11.83□□□□□ -0.52
VMP1-203ENST00000586245 RAB40BQ12829 278 aa11.83□□□□□ -0.52
VMP1-203ENST00000586245 ECH1Q13011 328 aa11.83□□□□□ -0.52
VMP1-203ENST00000586245 DAZAP2Q15038 168 aaPredicted RBP11.83□□□□□ -0.52
VMP1-203ENST00000586245 TAF13Q15543 124 aa11.83□□□□□ -0.52
VMP1-203ENST00000586245 C6orf141Q5SZD1 244 aa11.83□□□□□ -0.52
VMP1-203ENST00000586245 NCMAPQ5T1S8 102 aa11.83□□□□□ -0.52
VMP1-203ENST00000586245 KCTD18Q6PI47 426 aaPredicted RBP11.83□□□□□ -0.52
VMP1-203ENST00000586245 ZNF584Q8IVC4 421 aa11.83□□□□□ -0.52
VMP1-203ENST00000586245 CPEB3Q8NE35 698 aaKnown RBP11.83□□□□□ -0.52
VMP1-203ENST00000586245 OR10H4Q8NGA5 316 aa11.83□□□□□ -0.52
VMP1-203ENST00000586245 OR4F15Q8NGB8 312 aa11.83□□□□□ -0.52
VMP1-203ENST00000586245 OR2T27Q8NH04 317 aa11.83□□□□□ -0.52
VMP1-203ENST00000586245 OR1F12Q8NHA8 337 aa11.83□□□□□ -0.52
VMP1-203ENST00000586245 ST7LQ8TDW4 575 aa11.83□□□□□ -0.52
VMP1-203ENST00000586245 SMAP2Q8WU79 429 aaPredicted RBP11.83□□□□□ -0.52
VMP1-203ENST00000586245 ASB17Q8WXJ9 295 aa11.83□□□□□ -0.52
VMP1-203ENST00000586245 MAP6Q96JE9 813 aa11.83□□□□□ -0.52
VMP1-203ENST00000586245 TBX5Q99593 518 aa11.83□□□□□ -0.52
VMP1-203ENST00000586245 ATF6BQ99941 703 aa11.83□□□□□ -0.52
VMP1-203ENST00000586245 COPS4Q9BT78 406 aa11.83□□□□□ -0.52
VMP1-203ENST00000586245 ABHD6Q9BV23 337 aa11.83□□□□□ -0.52
VMP1-203ENST00000586245 CDH20Q9HBT6 801 aa11.83□□□□□ -0.52
VMP1-203ENST00000586245 MRPS18AQ9NVS2 196 aaKnown RBP11.83□□□□□ -0.52
VMP1-203ENST00000586245 EXOGQ9Y2C4 368 aaKnown RBP11.83□□□□□ -0.52
VMP1-203ENST00000586245 ADGRG4Q8IZF6 3080 aa11.83□□□□□ -0.52
VMP1-203ENST00000586245 ANKHD1Q8IWZ3 2542 aaKnown RBP11.83□□□□□ -0.52
VMP1-203ENST00000586245 C5orf49A4QMS7 147 aa11.82□□□□□ -0.52
VMP1-203ENST00000586245 OR6C6A6NF89 314 aa11.82□□□□□ -0.52
VMP1-203ENST00000586245 EFCAB10A6NFE3 127 aa11.82□□□□□ -0.52
VMP1-203ENST00000586245 A6NNC1 897 aa11.82□□□□□ -0.52
VMP1-203ENST00000586245 DEFB108AA8MXU0 73 aa11.82□□□□□ -0.52
VMP1-203ENST00000586245 ABCD4O14678 606 aa11.82□□□□□ -0.52
VMP1-203ENST00000586245 H2BFMP0C1H6 154 aa11.82□□□□□ -0.52
VMP1-203ENST00000586245 ALOX5APP20292 161 aa11.82□□□□□ -0.52
VMP1-203ENST00000586245 CCNOP22674 350 aa11.82□□□□□ -0.52
VMP1-203ENST00000586245 COL8A1P27658 744 aa11.82□□□□□ -0.52
VMP1-203ENST00000586245 SLC15A1P46059 708 aa11.82□□□□□ -0.52
VMP1-203ENST00000586245 CXCR4P61073 352 aa11.82□□□□□ -0.52
VMP1-203ENST00000586245 ACTC1P68032 377 aa11.82□□□□□ -0.52
VMP1-203ENST00000586245 ACTA1P68133 377 aa11.82□□□□□ -0.52
VMP1-203ENST00000586245 NAAAQ02083 359 aa11.82□□□□□ -0.52
VMP1-203ENST00000586245 MED21Q13503 144 aa11.82□□□□□ -0.52
VMP1-203ENST00000586245 MYPOPQ86VE0 399 aaPredicted RBP11.82□□□□□ -0.52
VMP1-203ENST00000586245 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.82□□□□□ -0.52
VMP1-203ENST00000586245 RADILQ96JH8 1075 aa11.82□□□□□ -0.52
VMP1-203ENST00000586245 POM121L2Q96KW2 1035 aa11.82□□□□□ -0.52
VMP1-203ENST00000586245 PLCXD1Q9NUJ7 323 aa11.82□□□□□ -0.52
VMP1-203ENST00000586245 SCN3BQ9NY72 215 aa11.82□□□□□ -0.52
VMP1-203ENST00000586245 COPS3Q9UNS2 423 aa11.82□□□□□ -0.52
VMP1-203ENST00000586245 COL12A1Q99715 3063 aa11.82□□□□□ -0.52
VMP1-203ENST00000586245 LOC100509620A0A075B734 347 aa11.81□□□□□ -0.52
VMP1-203ENST00000586245 IGHV2OR16-5A0A0B4J2B6 119 aa11.81□□□□□ -0.52
VMP1-203ENST00000586245 A0A1W2PQL4 384 aaPredicted RBP11.81□□□□□ -0.52
VMP1-203ENST00000586245 DAPL1A0PJW8 107 aa11.81□□□□□ -0.52
VMP1-203ENST00000586245 SLC1A7O00341 560 aa11.81□□□□□ -0.52
VMP1-203ENST00000586245 XPNPEP2O43895 674 aa11.81□□□□□ -0.52
VMP1-203ENST00000586245 CCL2P13500 99 aa11.81□□□□□ -0.52
VMP1-203ENST00000586245 HSD11B1P28845 292 aa11.81□□□□□ -0.52
VMP1-203ENST00000586245 GRB2P62993 217 aaKnown RBP11.81□□□□□ -0.52
VMP1-203ENST00000586245 GALK2Q01415 458 aa11.81□□□□□ -0.52
VMP1-203ENST00000586245 LAIR2Q6ISS4 152 aa11.81□□□□□ -0.52
VMP1-203ENST00000586245 ARL9Q6T311 187 aa11.81□□□□□ -0.52
VMP1-203ENST00000586245 SLC22A25Q6T423 547 aa11.81□□□□□ -0.52
VMP1-203ENST00000586245 ZNF322Q6U7Q0 402 aaPredicted RBP11.81□□□□□ -0.52
VMP1-203ENST00000586245 SPATC1Q76KD6 591 aa11.81□□□□□ -0.52
VMP1-203ENST00000586245 RHOUQ7L0Q8 258 aa11.81□□□□□ -0.52
VMP1-203ENST00000586245 KRT77Q7Z794 578 aa11.81□□□□□ -0.52
VMP1-203ENST00000586245 ZNF786Q8N393 782 aa11.81□□□□□ -0.52
VMP1-203ENST00000586245 ACBD7Q8N6N7 88 aa11.81□□□□□ -0.52
VMP1-203ENST00000586245 ZNF540Q8NDQ6 660 aa11.81□□□□□ -0.52
VMP1-203ENST00000586245 OR52I1Q8NGK6 324 aa11.81□□□□□ -0.52
VMP1-203ENST00000586245 OR10S1Q8NGN2 331 aa11.81□□□□□ -0.52
VMP1-203ENST00000586245 RNF133Q8WVZ7 376 aa11.81□□□□□ -0.52
VMP1-203ENST00000586245 GGHQ92820 318 aa11.81□□□□□ -0.52
VMP1-203ENST00000586245 SPTSSAQ969W0 71 aa11.81□□□□□ -0.52
VMP1-203ENST00000586245 MRPL48Q96GC5 212 aaKnown RBP11.81□□□□□ -0.52
VMP1-203ENST00000586245 DCLRE1CQ96SD1 692 aaKnown RBP11.81□□□□□ -0.52
VMP1-203ENST00000586245 AMELYQ99218 206 aa11.81□□□□□ -0.52
VMP1-203ENST00000586245 MYCBPQ99417 103 aaPredicted RBP11.81□□□□□ -0.52
VMP1-203ENST00000586245 TTTY10Q9BZA0 68 aa11.81□□□□□ -0.52
VMP1-203ENST00000586245 PNRC2Q9NPJ4 139 aaKnown RBP11.81□□□□□ -0.52
VMP1-203ENST00000586245 INPP5EQ9NRR6 644 aa11.81□□□□□ -0.52
VMP1-203ENST00000586245 DDX28Q9NUL7 540 aaKnown RBP11.81□□□□□ -0.52
VMP1-203ENST00000586245 CNOT2Q9NZN8 540 aaKnown RBP11.81□□□□□ -0.52
VMP1-203ENST00000586245 EIF3KQ9UBQ5 218 aaKnown RBP11.81□□□□□ -0.52
VMP1-203ENST00000586245 IKZF2Q9UKS7 526 aa11.81□□□□□ -0.52
VMP1-203ENST00000586245 KLHDC2Q9Y2U9 406 aa11.81□□□□□ -0.52
VMP1-203ENST00000586245 TPRKBQ9Y3C4 175 aa11.81□□□□□ -0.52
VMP1-203ENST00000586245 RNF115Q9Y4L5 304 aa11.81□□□□□ -0.52
VMP1-203ENST00000586245 SPEF1Q9Y4P9 236 aa11.81□□□□□ -0.52
VMP1-203ENST00000586245 F5H5K5 113 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms