RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 FHL1Q13642 323 aa9.78□□□□□ -0.84
LIG3-207ENST00000586119 ZMYND11Q15326 602 aa9.78□□□□□ -0.84
LIG3-207ENST00000586119 LRRC23Q53EV4 343 aaPredicted RBP9.78□□□□□ -0.84
LIG3-207ENST00000586119 CYBRD1Q53TN4 286 aa9.78□□□□□ -0.84
LIG3-207ENST00000586119 ASRGL1Q7L266 308 aa9.78□□□□□ -0.84
LIG3-207ENST00000586119 DOK3Q7L591 496 aa9.78□□□□□ -0.84
LIG3-207ENST00000586119 ITLN1Q8WWA0 313 aa9.78□□□□□ -0.84
LIG3-207ENST00000586119 LIPHQ8WWY8 451 aa9.78□□□□□ -0.84
LIG3-207ENST00000586119 NSMCE2Q96MF7 247 aa9.78□□□□□ -0.84
LIG3-207ENST00000586119 SIGLEC11Q96RL6 698 aa9.78□□□□□ -0.84
LIG3-207ENST00000586119 CADM1Q9BY67 442 aaKnown RBP9.78□□□□□ -0.84
LIG3-207ENST00000586119 TRIM15Q9C019 465 aa9.78□□□□□ -0.84
LIG3-207ENST00000586119 UNKLQ9H9P5 680 aaKnown RBP9.78□□□□□ -0.84
LIG3-207ENST00000586119 NTN4Q9HB63 628 aa9.78□□□□□ -0.84
LIG3-207ENST00000586119 PATZ1Q9HBE1 687 aaKnown RBP9.78□□□□□ -0.84
LIG3-207ENST00000586119 DCAF13Q9NV06 445 aaKnown RBP9.78□□□□□ -0.84
LIG3-207ENST00000586119 RHCGQ9UBD6 479 aa9.78□□□□□ -0.84
LIG3-207ENST00000586119 NUP50Q9UKX7 468 aa9.78□□□□□ -0.84
LIG3-207ENST00000586119 STARD10Q9Y365 291 aa9.78□□□□□ -0.84
LIG3-207ENST00000586119 AUP1Q9Y679 476 aa9.78□□□□□ -0.84
LIG3-207ENST00000586119 TRAV27A0A087WT01 109 aa9.77□□□□□ -0.85
LIG3-207ENST00000586119 IGHV3-64DA0A0J9YX35 117 aa9.77□□□□□ -0.85
LIG3-207ENST00000586119 MDFIC2A0A1B0GVS7 189 aa9.77□□□□□ -0.85
LIG3-207ENST00000586119 A0A1W2PPL8 197 aa9.77□□□□□ -0.85
LIG3-207ENST00000586119 IMPA2O14732 288 aa9.77□□□□□ -0.85
LIG3-207ENST00000586119 TIMM8AO60220 97 aaPredicted RBP9.77□□□□□ -0.85
LIG3-207ENST00000586119 OR5F1O95221 314 aa9.77□□□□□ -0.85
LIG3-207ENST00000586119 GPANK1O95872 356 aa9.77□□□□□ -0.85
LIG3-207ENST00000586119 SERPINA1P01009 418 aa9.77□□□□□ -0.85
LIG3-207ENST00000586119 CST2P09228 141 aa9.77□□□□□ -0.85
LIG3-207ENST00000586119 IGHV4-38-2P0DP08 117 aa9.77□□□□□ -0.85
LIG3-207ENST00000586119 IFI30P13284 250 aa9.77□□□□□ -0.85
LIG3-207ENST00000586119 NCK1P16333 377 aa9.77□□□□□ -0.85
LIG3-207ENST00000586119 HOXB6P17509 224 aaKnown RBP9.77□□□□□ -0.85
LIG3-207ENST00000586119 CD80P33681 288 aa9.77□□□□□ -0.85
LIG3-207ENST00000586119 RBM34P42696 430 aaKnown RBP9.77□□□□□ -0.85
LIG3-207ENST00000586119 RPL27P61353 136 aaKnown RBP9.77□□□□□ -0.85
LIG3-207ENST00000586119 DEFA6Q01524 100 aa9.77□□□□□ -0.85
LIG3-207ENST00000586119 SRSF4Q08170 494 aaKnown RBP9.77□□□□□ -0.85
LIG3-207ENST00000586119 BAMBIQ13145 260 aa9.77□□□□□ -0.85
LIG3-207ENST00000586119 TAF11Q15544 211 aa9.77□□□□□ -0.85
LIG3-207ENST00000586119 ALG10Q5BKT4 473 aa9.77□□□□□ -0.85
LIG3-207ENST00000586119 ARMCX4Q5H9R4 360 aa9.77□□□□□ -0.85
LIG3-207ENST00000586119 LCN8Q6JVE9 175 aa9.77□□□□□ -0.85
LIG3-207ENST00000586119 SHISA2Q6UWI4 295 aa9.77□□□□□ -0.85
LIG3-207ENST00000586119 FOXL2NBQ6ZUU3 175 aa9.77□□□□□ -0.85
LIG3-207ENST00000586119 LRRC28Q86X40 367 aaPredicted RBP9.77□□□□□ -0.85
LIG3-207ENST00000586119 DHFR2Q86XF0 187 aa9.77□□□□□ -0.85
LIG3-207ENST00000586119 ZNF283Q8N7M2 679 aa9.77□□□□□ -0.85
LIG3-207ENST00000586119 FAM156AQ8NDB6 213 aa9.77□□□□□ -0.85
LIG3-207ENST00000586119 OR2Z1Q8NG97 314 aa9.77□□□□□ -0.85
LIG3-207ENST00000586119 OR51A7Q8NH64 312 aa9.77□□□□□ -0.85
LIG3-207ENST00000586119 ZNF420Q8TAQ5 688 aaPredicted RBP9.77□□□□□ -0.85
LIG3-207ENST00000586119 CMBLQ96DG6 245 aa9.77□□□□□ -0.85
LIG3-207ENST00000586119 RBP7Q96R05 134 aa9.77□□□□□ -0.85
LIG3-207ENST00000586119 POLR2J2Q9GZM3 115 aaKnown RBP9.77□□□□□ -0.85
LIG3-207ENST00000586119 POLR2J3Q9H1A7 115 aaKnown RBP9.77□□□□□ -0.85
LIG3-207ENST00000586119 ZNF696Q9H7X3 374 aa9.77□□□□□ -0.85
LIG3-207ENST00000586119 PLEK2Q9NYT0 353 aa9.77□□□□□ -0.85
LIG3-207ENST00000586119 ZDHHC8Q9ULC8 765 aa9.77□□□□□ -0.85
LIG3-207ENST00000586119 A4GNTQ9UNA3 340 aa9.77□□□□□ -0.85
LIG3-207ENST00000586119 HIF3AQ9Y2N7 669 aa9.77□□□□□ -0.85
LIG3-207ENST00000586119 MED31Q9Y3C7 131 aa9.77□□□□□ -0.85
LIG3-207ENST00000586119 TIMM10BQ9Y5J6 103 aa9.77□□□□□ -0.85
LIG3-207ENST00000586119 INSIG2Q9Y5U4 225 aa9.77□□□□□ -0.85
LIG3-207ENST00000586119 PPIAL4EA0A075B759 164 aa9.76□□□□□ -0.85
LIG3-207ENST00000586119 PPIAL4CA0A0B4J2A2 164 aa9.76□□□□□ -0.85
LIG3-207ENST00000586119 PPIAL4DF5H284 164 aa9.76□□□□□ -0.85
LIG3-207ENST00000586119 J3KTA2 159 aa9.76□□□□□ -0.85
LIG3-207ENST00000586119 ACOT8O14734 319 aa9.76□□□□□ -0.85
LIG3-207ENST00000586119 IGHMP01871 453 aa9.76□□□□□ -0.85
LIG3-207ENST00000586119 PPIAL4FP0DN26 164 aa9.76□□□□□ -0.85
LIG3-207ENST00000586119 OMGP23515 440 aa9.76□□□□□ -0.85
LIG3-207ENST00000586119 SLC3A1Q07837 685 aa9.76□□□□□ -0.85
LIG3-207ENST00000586119 SLC9A3R2Q15599 337 aa9.76□□□□□ -0.85
LIG3-207ENST00000586119 ZSCAN26Q16670 478 aa9.76□□□□□ -0.85
LIG3-207ENST00000586119 IFI44LQ53G44 452 aa9.76□□□□□ -0.85
LIG3-207ENST00000586119 C1orf94Q6P1W5 598 aa9.76□□□□□ -0.85
LIG3-207ENST00000586119 RBMS3Q6XE24 437 aaKnown RBP9.76□□□□□ -0.85
LIG3-207ENST00000586119 OR5AS1Q8N127 324 aa9.76□□□□□ -0.85
LIG3-207ENST00000586119 LRGUKQ96M69 825 aa9.76□□□□□ -0.85
LIG3-207ENST00000586119 ALG12Q9BV10 488 aa9.76□□□□□ -0.85
LIG3-207ENST00000586119 SMURF2Q9HAU4 748 aa9.76□□□□□ -0.85
LIG3-207ENST00000586119 CYSLTR2Q9NS75 346 aa9.76□□□□□ -0.85
LIG3-207ENST00000586119 POLR3KQ9Y2Y1 108 aaPredicted RBP9.76□□□□□ -0.85
LIG3-207ENST00000586119 ERICH4A6NGS2 130 aa9.75□□□□□ -0.85
LIG3-207ENST00000586119 AQP12BA6NM10 295 aa9.75□□□□□ -0.85
LIG3-207ENST00000586119 F5H0A9 414 aaPredicted RBP9.75□□□□□ -0.85
LIG3-207ENST00000586119 H0YL77 283 aa9.75□□□□□ -0.85
LIG3-207ENST00000586119 ICMTO60725 284 aa9.75□□□□□ -0.85
LIG3-207ENST00000586119 ZNF682O95780 498 aa9.75□□□□□ -0.85
LIG3-207ENST00000586119 ABHD16AO95870 558 aa9.75□□□□□ -0.85
LIG3-207ENST00000586119 WNT2P09544 360 aa9.75□□□□□ -0.85
LIG3-207ENST00000586119 THRBP10828 461 aa9.75□□□□□ -0.85
LIG3-207ENST00000586119 ZNF26P17031 533 aaPredicted RBP9.75□□□□□ -0.85
LIG3-207ENST00000586119 MDKP21741 143 aaPredicted RBP9.75□□□□□ -0.85
LIG3-207ENST00000586119 MSX2P35548 267 aaPredicted RBP9.75□□□□□ -0.85
LIG3-207ENST00000586119 LIPAP38571 399 aa9.75□□□□□ -0.85
LIG3-207ENST00000586119 ARHGDIAP52565 204 aa9.75□□□□□ -0.85
LIG3-207ENST00000586119 BTG1P62324 171 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms