RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 UNC119BA6NIH7 251 aa9.19□□□□□ -0.94
CSNK1D-226ENST00000585026 CDC42EP2O14613 210 aa9.19□□□□□ -0.94
CSNK1D-226ENST00000585026 TRAF3IP2O43734 574 aaPredicted RBP9.19□□□□□ -0.94
CSNK1D-226ENST00000585026 RGS9O75916 674 aaPredicted RBP9.19□□□□□ -0.94
CSNK1D-226ENST00000585026 SEC14L2O76054 403 aa9.19□□□□□ -0.94
CSNK1D-226ENST00000585026 MT-ND5P03915 603 aa9.19□□□□□ -0.94
CSNK1D-226ENST00000585026 TSPAN19P0C672 248 aa9.19□□□□□ -0.94
CSNK1D-226ENST00000585026 CCDC159P0C7I6 412 aa9.19□□□□□ -0.94
CSNK1D-226ENST00000585026 IFI30P13284 250 aa9.19□□□□□ -0.94
CSNK1D-226ENST00000585026 ZNF14P17017 642 aaPredicted RBP9.19□□□□□ -0.94
CSNK1D-226ENST00000585026 GATA3P23771 443 aa9.19□□□□□ -0.94
CSNK1D-226ENST00000585026 FPR2P25090 351 aa9.19□□□□□ -0.94
CSNK1D-226ENST00000585026 CDC42P60953 191 aa9.19□□□□□ -0.94
CSNK1D-226ENST00000585026 SNRPGP62308 76 aaKnown RBP9.19□□□□□ -0.94
CSNK1D-226ENST00000585026 TOP3AQ13472 1001 aaPredicted RBP9.19□□□□□ -0.94
CSNK1D-226ENST00000585026 FHL1Q13642 323 aa9.19□□□□□ -0.94
CSNK1D-226ENST00000585026 MAD2L1BPQ15013 274 aaPredicted RBP9.19□□□□□ -0.94
CSNK1D-226ENST00000585026 PCGF3Q3KNV8 242 aa9.19□□□□□ -0.94
CSNK1D-226ENST00000585026 LAIR2Q6ISS4 152 aa9.19□□□□□ -0.94
CSNK1D-226ENST00000585026 RGS7BPQ6MZT1 257 aaPredicted RBP9.19□□□□□ -0.94
CSNK1D-226ENST00000585026 TMEM154Q6P9G4 183 aa9.19□□□□□ -0.94
CSNK1D-226ENST00000585026 ZNF620Q6ZNG0 422 aa9.19□□□□□ -0.94
CSNK1D-226ENST00000585026 BPIFB2Q8N4F0 458 aa9.19□□□□□ -0.94
CSNK1D-226ENST00000585026 SCAIQ8N9R8 606 aa9.19□□□□□ -0.94
CSNK1D-226ENST00000585026 PFN4Q8NHR9 129 aa9.19□□□□□ -0.94
CSNK1D-226ENST00000585026 NANPQ8TBE9 248 aa9.19□□□□□ -0.94
CSNK1D-226ENST00000585026 TAAR8Q969N4 342 aa9.19□□□□□ -0.94
CSNK1D-226ENST00000585026 SGTBQ96EQ0 304 aa9.19□□□□□ -0.94
CSNK1D-226ENST00000585026 TIMD4Q96H15 378 aa9.19□□□□□ -0.94
CSNK1D-226ENST00000585026 MS4A3Q96HJ5 214 aa9.19□□□□□ -0.94
CSNK1D-226ENST00000585026 FOXB1Q99853 325 aa9.19□□□□□ -0.94
CSNK1D-226ENST00000585026 C1orf198Q9H425 327 aa9.19□□□□□ -0.94
CSNK1D-226ENST00000585026 ZNF665Q9H7R5 613 aa9.19□□□□□ -0.94
CSNK1D-226ENST00000585026 PLCXD1Q9NUJ7 323 aa9.19□□□□□ -0.94
CSNK1D-226ENST00000585026 SLCO1C1Q9NYB5 712 aa9.19□□□□□ -0.94
CSNK1D-226ENST00000585026 SIGLEC7Q9Y286 467 aa9.19□□□□□ -0.94
CSNK1D-226ENST00000585026 MYRFQ9Y2G1 1151 aa9.19□□□□□ -0.94
CSNK1D-226ENST00000585026 CDH10Q9Y6N8 788 aa9.19□□□□□ -0.94
CSNK1D-226ENST00000585026 TRIM64CA6NLI5 447 aa9.18□□□□□ -0.94
CSNK1D-226ENST00000585026 EFCAB9A8MZ26 197 aa9.18□□□□□ -0.94
CSNK1D-226ENST00000585026 H3BN98 237 aa9.18□□□□□ -0.94
CSNK1D-226ENST00000585026 PIP5K1CO60331 668 aa9.18□□□□□ -0.94
CSNK1D-226ENST00000585026 MPZL1O95297 269 aa9.18□□□□□ -0.94
CSNK1D-226ENST00000585026 FARS2O95363 451 aaKnown RBP9.18□□□□□ -0.94
CSNK1D-226ENST00000585026 PTHP01270 115 aa9.18□□□□□ -0.94
CSNK1D-226ENST00000585026 B4GALT1P15291 398 aa9.18□□□□□ -0.94
CSNK1D-226ENST00000585026 FXYD6P3P58550 94 aa9.18□□□□□ -0.94
CSNK1D-226ENST00000585026 LMO4P61968 165 aa9.18□□□□□ -0.94
CSNK1D-226ENST00000585026 PMS2P3Q13401 168 aa9.18□□□□□ -0.94
CSNK1D-226ENST00000585026 GINS1Q14691 196 aa9.18□□□□□ -0.94
CSNK1D-226ENST00000585026 ZBED5Q49AG3 693 aa9.18□□□□□ -0.94
CSNK1D-226ENST00000585026 SLC27A4Q6P1M0 643 aa9.18□□□□□ -0.94
CSNK1D-226ENST00000585026 RBMS3Q6XE24 437 aaKnown RBP9.18□□□□□ -0.94
CSNK1D-226ENST00000585026 C1QL2Q7Z5L3 287 aa9.18□□□□□ -0.94
CSNK1D-226ENST00000585026 DPPA2Q7Z7J5 298 aa9.18□□□□□ -0.94
CSNK1D-226ENST00000585026 ENTHD1Q8IYW4 607 aa9.18□□□□□ -0.94
CSNK1D-226ENST00000585026 C10orf53Q8N6V4 93 aa9.18□□□□□ -0.94
CSNK1D-226ENST00000585026 OR8J1Q8NGP2 316 aa9.18□□□□□ -0.94
CSNK1D-226ENST00000585026 RNF217Q8TC41 542 aa9.18□□□□□ -0.94
CSNK1D-226ENST00000585026 C11orf40Q8WZ69 217 aa9.18□□□□□ -0.94
CSNK1D-226ENST00000585026 HINT3Q9NQE9 182 aaKnown RBP9.18□□□□□ -0.94
CSNK1D-226ENST00000585026 DDX28Q9NUL7 540 aaKnown RBP9.18□□□□□ -0.94
CSNK1D-226ENST00000585026 SEC14L4Q9UDX3 406 aa9.18□□□□□ -0.94
CSNK1D-226ENST00000585026 BAIAP2Q9UQB8 552 aa9.18□□□□□ -0.94
CSNK1D-226ENST00000585026 MGAM2Q2M2H8 2515 aa9.17□□□□□ -0.94
CSNK1D-226ENST00000585026 LOC105371242A0A075B767 164 aa9.17□□□□□ -0.94
CSNK1D-226ENST00000585026 C17orf100A8MU93 164 aa9.17□□□□□ -0.94
CSNK1D-226ENST00000585026 TPD52L2O43399 206 aaKnown RBP9.17□□□□□ -0.94
CSNK1D-226ENST00000585026 MRPS14O60783 128 aaKnown RBP9.17□□□□□ -0.94
CSNK1D-226ENST00000585026 WBP4O75554 376 aaKnown RBP9.17□□□□□ -0.94
CSNK1D-226ENST00000585026 RP2O75695 350 aa9.17□□□□□ -0.94
CSNK1D-226ENST00000585026 OR7A10O76100 309 aa9.17□□□□□ -0.94
CSNK1D-226ENST00000585026 OR6A2O95222 327 aa9.17□□□□□ -0.94
CSNK1D-226ENST00000585026 MT-ATP6P00846 226 aa9.17□□□□□ -0.94
CSNK1D-226ENST00000585026 HMGN1P05114 100 aa9.17□□□□□ -0.94
CSNK1D-226ENST00000585026 SERPINA5P05154 406 aa9.17□□□□□ -0.94
CSNK1D-226ENST00000585026 ASAH2BP0C7U1 165 aa9.17□□□□□ -0.94
CSNK1D-226ENST00000585026 NAT2P11245 290 aa9.17□□□□□ -0.94
CSNK1D-226ENST00000585026 FUT1P19526 365 aa9.17□□□□□ -0.94
CSNK1D-226ENST00000585026 AHCYP23526 432 aa9.17□□□□□ -0.94
CSNK1D-226ENST00000585026 CRHBPP24387 322 aa9.17□□□□□ -0.94
CSNK1D-226ENST00000585026 POU1F1P28069 291 aa9.17□□□□□ -0.94
CSNK1D-226ENST00000585026 RAD52P43351 418 aa9.17□□□□□ -0.94
CSNK1D-226ENST00000585026 GPR4P46093 362 aa9.17□□□□□ -0.94
CSNK1D-226ENST00000585026 CSNK1A1P48729 337 aa9.17□□□□□ -0.94
CSNK1D-226ENST00000585026 KLF3P57682 345 aaPredicted RBP9.17□□□□□ -0.94
CSNK1D-226ENST00000585026 IL5RAQ01344 420 aa9.17□□□□□ -0.94
CSNK1D-226ENST00000585026 PUDPQ08623 228 aa9.17□□□□□ -0.94
CSNK1D-226ENST00000585026 FOXL1Q12952 345 aa9.17□□□□□ -0.94
CSNK1D-226ENST00000585026 BLMHQ13867 455 aa9.17□□□□□ -0.94
CSNK1D-226ENST00000585026 ZNF74Q16587 644 aa9.17□□□□□ -0.94
CSNK1D-226ENST00000585026 OCLNQ16625 522 aa9.17□□□□□ -0.94
CSNK1D-226ENST00000585026 MSMPQ1L6U9 139 aa9.17□□□□□ -0.94
CSNK1D-226ENST00000585026 FAM209AQ5JX71 171 aa9.17□□□□□ -0.94
CSNK1D-226ENST00000585026 DCAF12L2Q5VW00 463 aa9.17□□□□□ -0.94
CSNK1D-226ENST00000585026 TMEM236Q5W0B7 351 aa9.17□□□□□ -0.94
CSNK1D-226ENST00000585026 SMARCD3Q6STE5 483 aa9.17□□□□□ -0.94
CSNK1D-226ENST00000585026 SHISA2Q6UWI4 295 aa9.17□□□□□ -0.94
CSNK1D-226ENST00000585026 PXKQ7Z7A4 578 aa9.17□□□□□ -0.94
CSNK1D-226ENST00000585026 OAFQ86UD1 273 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms