RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 NEU4Q8WWR8 484 aaPredicted RBP13.93□□□□□ -0.18
ERBB2-222ENST00000584908 VRK1Q99986 396 aaPredicted RBP13.93□□□□□ -0.18
ERBB2-222ENST00000584908 SYT3Q9BQG1 590 aa13.93□□□□□ -0.18
ERBB2-222ENST00000584908 HDHD2Q9H0R4 259 aa13.93□□□□□ -0.18
ERBB2-222ENST00000584908 TUBG2Q9NRH3 451 aa13.93□□□□□ -0.18
ERBB2-222ENST00000584908 TBCCD1Q9NVR7 557 aa13.93□□□□□ -0.18
ERBB2-222ENST00000584908 A0A096LNT2 108 aa13.92□□□□□ -0.18
ERBB2-222ENST00000584908 RIIAD1A6NNX1 92 aa13.92□□□□□ -0.18
ERBB2-222ENST00000584908 FAM171A2A8MVW0 826 aa13.92□□□□□ -0.18
ERBB2-222ENST00000584908 J3QW42 95 aa13.92□□□□□ -0.18
ERBB2-222ENST00000584908 CLPTM1O96005 669 aa13.92□□□□□ -0.18
ERBB2-222ENST00000584908 NGFP01138 241 aa13.92□□□□□ -0.18
ERBB2-222ENST00000584908 ADRA2AP08913 450 aa13.92□□□□□ -0.18
ERBB2-222ENST00000584908 ZNF3P17036 446 aa13.92□□□□□ -0.18
ERBB2-222ENST00000584908 SPI1P17947 270 aa13.92□□□□□ -0.18
ERBB2-222ENST00000584908 SELENOVP59797 346 aa13.92□□□□□ -0.18
ERBB2-222ENST00000584908 ACTR3P61158 418 aa13.92□□□□□ -0.18
ERBB2-222ENST00000584908 PCK2Q16822 640 aa13.92□□□□□ -0.18
ERBB2-222ENST00000584908 ACSM5Q6NUN0 579 aa13.92□□□□□ -0.18
ERBB2-222ENST00000584908 RFPL4BQ6ZWI9 263 aa13.92□□□□□ -0.18
ERBB2-222ENST00000584908 HIPK1Q86Z02 1210 aa13.92□□□□□ -0.18
ERBB2-222ENST00000584908 ATG16L2Q8NAA4 619 aa13.92□□□□□ -0.18
ERBB2-222ENST00000584908 PROKR2Q8NFJ6 384 aa13.92□□□□□ -0.18
ERBB2-222ENST00000584908 C10orf105Q8TEF2 133 aa13.92□□□□□ -0.18
ERBB2-222ENST00000584908 IPCEF1Q8WWN9 437 aaPredicted RBP13.92□□□□□ -0.18
ERBB2-222ENST00000584908 DCLRE1CQ96SD1 692 aaKnown RBP13.92□□□□□ -0.18
ERBB2-222ENST00000584908 COQ7Q99807 217 aa13.92□□□□□ -0.18
ERBB2-222ENST00000584908 RHNO1Q9BSD3 238 aa13.92□□□□□ -0.18
ERBB2-222ENST00000584908 REG4Q9BYZ8 158 aa13.92□□□□□ -0.18
ERBB2-222ENST00000584908 OR51B6Q9H340 312 aa13.92□□□□□ -0.18
ERBB2-222ENST00000584908 SLC25A19Q9HC21 320 aa13.92□□□□□ -0.18
ERBB2-222ENST00000584908 DYNLRB1Q9NP97 96 aa13.92□□□□□ -0.18
ERBB2-222ENST00000584908 SLCO1C1Q9NYB5 712 aa13.92□□□□□ -0.18
ERBB2-222ENST00000584908 DUSP13Q9UII6 198 aa13.92□□□□□ -0.18
ERBB2-222ENST00000584908 FZR1Q9UM11 496 aa13.92□□□□□ -0.18
ERBB2-222ENST00000584908 POLR1DQ9Y2S0 133 aa13.92□□□□□ -0.18
ERBB2-222ENST00000584908 IGHV4-30-2A0A087WSY4 118 aa13.91□□□□□ -0.18
ERBB2-222ENST00000584908 NDUFS8O00217 210 aa13.91□□□□□ -0.18
ERBB2-222ENST00000584908 LY6HO94772 140 aa13.91□□□□□ -0.18
ERBB2-222ENST00000584908 ERCC1P07992 297 aaPredicted RBP13.91□□□□□ -0.18
ERBB2-222ENST00000584908 SLC25A16P16260 332 aa13.91□□□□□ -0.18
ERBB2-222ENST00000584908 PYCR1P32322 319 aa13.91□□□□□ -0.18
ERBB2-222ENST00000584908 DAPP51397 102 aa13.91□□□□□ -0.18
ERBB2-222ENST00000584908 BLVRAP53004 296 aa13.91□□□□□ -0.18
ERBB2-222ENST00000584908 PPP1CBP62140 327 aa13.91□□□□□ -0.18
ERBB2-222ENST00000584908 GINS1Q14691 196 aa13.91□□□□□ -0.18
ERBB2-222ENST00000584908 MOGQ16653 247 aa13.91□□□□□ -0.18
ERBB2-222ENST00000584908 RSPO1Q2MKA7 263 aaPredicted RBP13.91□□□□□ -0.18
ERBB2-222ENST00000584908 KRTAP27-1Q3LI81 207 aa13.91□□□□□ -0.18
ERBB2-222ENST00000584908 ZNF718Q3SXZ3 478 aa13.91□□□□□ -0.18
ERBB2-222ENST00000584908 ELFN2Q5R3F8 820 aa13.91□□□□□ -0.18
ERBB2-222ENST00000584908 ZCCHC24Q8N2G6 241 aaKnown RBP13.91□□□□□ -0.18
ERBB2-222ENST00000584908 IQCF1Q8N6M8 205 aa13.91□□□□□ -0.18
ERBB2-222ENST00000584908 OR9Q1Q8NGQ5 310 aa13.91□□□□□ -0.18
ERBB2-222ENST00000584908 ABHD4Q8TB40 342 aa13.91□□□□□ -0.18
ERBB2-222ENST00000584908 KLF14Q8TD94 323 aaPredicted RBP13.91□□□□□ -0.18
ERBB2-222ENST00000584908 FAM168AQ92567 244 aa13.91□□□□□ -0.18
ERBB2-222ENST00000584908 GABARAPL1Q9H0R8 117 aa13.91□□□□□ -0.18
ERBB2-222ENST00000584908 PAPOLBQ9NRJ5 636 aaKnown RBP13.91□□□□□ -0.18
ERBB2-222ENST00000584908 GPR160Q9UJ42 338 aa13.91□□□□□ -0.18
ERBB2-222ENST00000584908 VWC2LB2RUY7 222 aa13.9□□□□□ -0.18
ERBB2-222ENST00000584908 RNF223E7ERA6 249 aa13.9□□□□□ -0.18
ERBB2-222ENST00000584908 SURF4O15260 269 aa13.9□□□□□ -0.18
ERBB2-222ENST00000584908 ABHD16AO95870 558 aa13.9□□□□□ -0.18
ERBB2-222ENST00000584908 HLA-DQA2P01906 255 aa13.9□□□□□ -0.18
ERBB2-222ENST00000584908 HMGN1P05114 100 aa13.9□□□□□ -0.18
ERBB2-222ENST00000584908 FMO3P31513 532 aa13.9□□□□□ -0.18
ERBB2-222ENST00000584908 ALDH3B1P43353 468 aa13.9□□□□□ -0.18
ERBB2-222ENST00000584908 RGS6P49758 472 aa13.9□□□□□ -0.18
ERBB2-222ENST00000584908 ECH1Q13011 328 aa13.9□□□□□ -0.18
ERBB2-222ENST00000584908 TMEM255AQ5JRV8 349 aa13.9□□□□□ -0.18
ERBB2-222ENST00000584908 TEX30Q5JUR7 227 aa13.9□□□□□ -0.18
ERBB2-222ENST00000584908 LINC01590Q5TEZ4 76 aa13.9□□□□□ -0.18
ERBB2-222ENST00000584908 CORO6Q6QEF8 472 aa13.9□□□□□ -0.18
ERBB2-222ENST00000584908 CFAP77Q6ZQR2 320 aa13.9□□□□□ -0.18
ERBB2-222ENST00000584908 SLC25A40Q8TBP6 338 aa13.9□□□□□ -0.18
ERBB2-222ENST00000584908 LRTOMTQ8WZ04 291 aa13.9□□□□□ -0.18
ERBB2-222ENST00000584908 SLC7A6Q92536 515 aa13.9□□□□□ -0.18
ERBB2-222ENST00000584908 PTP4A1Q93096 173 aa13.9□□□□□ -0.18
ERBB2-222ENST00000584908 COG8Q96MW5 612 aa13.9□□□□□ -0.18
ERBB2-222ENST00000584908 OR2J1Q9GZK6 312 aa13.9□□□□□ -0.18
ERBB2-222ENST00000584908 MARCH7Q9H992 704 aa13.9□□□□□ -0.18
ERBB2-222ENST00000584908 PNRC2Q9NPJ4 139 aaKnown RBP13.9□□□□□ -0.18
ERBB2-222ENST00000584908 TAAR3PQ9P1P4 343 aa13.9□□□□□ -0.18
ERBB2-222ENST00000584908 COMMD3-BMI1R4GMX3 469 aa13.9□□□□□ -0.18
ERBB2-222ENST00000584908 ABCA1O95477 2261 aa13.9□□□□□ -0.18
ERBB2-222ENST00000584908 A0A1W2PPW3 197 aa13.9□□□□□ -0.19
ERBB2-222ENST00000584908 LOC390937A0A1W2PQ73 354 aa13.9□□□□□ -0.19
ERBB2-222ENST00000584908 G3V2T6 193 aa13.9□□□□□ -0.19
ERBB2-222ENST00000584908 ZNF823P16415 610 aa13.9□□□□□ -0.19
ERBB2-222ENST00000584908 POU1F1P28069 291 aa13.9□□□□□ -0.19
ERBB2-222ENST00000584908 GCH1P30793 250 aa13.9□□□□□ -0.19
ERBB2-222ENST00000584908 MPV17P39210 176 aa13.9□□□□□ -0.19
ERBB2-222ENST00000584908 PDLIM4P50479 330 aa13.9□□□□□ -0.19
ERBB2-222ENST00000584908 CRISP1P54107 249 aa13.9□□□□□ -0.19
ERBB2-222ENST00000584908 ESRRGP62508 458 aa13.9□□□□□ -0.19
ERBB2-222ENST00000584908 MAD2L1BPQ15013 274 aaPredicted RBP13.9□□□□□ -0.19
ERBB2-222ENST00000584908 KDM4DQ6B0I6 523 aa13.9□□□□□ -0.19
ERBB2-222ENST00000584908 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.9□□□□□ -0.19
ERBB2-222ENST00000584908 ZDHHC13Q8IUH4 622 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms