RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 ACTA1P68133 377 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 NTRK2Q16620 822 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 SLC36A2Q495M3 483 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 TIGD3Q6B0B8 471 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 MRPL14Q6P1L8 145 aaKnown RBP9.15□□□□□ -0.94
RFFL-212ENST00000584655 FAM122BQ7Z309 247 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 SIAH3Q8IW03 269 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 PRSS35Q8N3Z0 413 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 PGLYRP3Q96LB9 341 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 MRPL39Q9NYK5 338 aaKnown RBP9.15□□□□□ -0.94
RFFL-212ENST00000584655 V9GY05 133 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 TMEM235A6NFC5 223 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 KLK10O43240 276 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 ATAD3CQ5T2N8 411 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 SLC16A9Q7RTY1 509 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 OR5AS1Q8N127 324 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 BMPERQ8N8U9 685 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 OR10D3Q8NH80 312 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 CASTOR1Q8WTX7 329 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 NR4A3Q92570 626 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 UTP23Q9BRU9 249 aaKnown RBP9.15□□□□□ -0.94
RFFL-212ENST00000584655 ZNF649Q9BS31 505 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 PRR13Q9NZ81 148 aa9.15□□□□□ -0.94
RFFL-212ENST00000584655 LIPT2A6NK58 231 aa9.15□□□□□ -0.95
RFFL-212ENST00000584655 LYRM1O43325 122 aa9.15□□□□□ -0.95
RFFL-212ENST00000584655 IGHG1P01857 330 aa9.15□□□□□ -0.95
RFFL-212ENST00000584655 CD2P06729 351 aa9.15□□□□□ -0.95
RFFL-212ENST00000584655 FTH1P19P0C7X4 201 aa9.15□□□□□ -0.95
RFFL-212ENST00000584655 HTR2BP41595 481 aa9.15□□□□□ -0.95
RFFL-212ENST00000584655 MAP2K3P46734 347 aa9.15□□□□□ -0.95
RFFL-212ENST00000584655 ACTA2P62736 377 aa9.15□□□□□ -0.95
RFFL-212ENST00000584655 PPP3R1P63098 170 aa9.15□□□□□ -0.95
RFFL-212ENST00000584655 ACTG2P63267 376 aa9.15□□□□□ -0.95
RFFL-212ENST00000584655 FNDC7Q5VTL7 733 aa9.15□□□□□ -0.95
RFFL-212ENST00000584655 ZNF544Q6NX49 715 aa9.15□□□□□ -0.95
RFFL-212ENST00000584655 AAED1Q7RTV5 226 aa9.15□□□□□ -0.95
RFFL-212ENST00000584655 GRPEL2Q8TAA5 225 aa9.15□□□□□ -0.95
RFFL-212ENST00000584655 MCHR2Q969V1 340 aa9.15□□□□□ -0.95
RFFL-212ENST00000584655 ADAM19Q9H013 955 aa9.15□□□□□ -0.95
RFFL-212ENST00000584655 ING4Q9UNL4 249 aa9.15□□□□□ -0.95
RFFL-212ENST00000584655 EML5Q05BV3 1969 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 HTR3BO95264 441 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 IGHA1P01876 353 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 EPXP11678 715 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 ADRA2CP18825 462 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 SERPINA2P20848 420 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 CDK2P24941 298 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 SSTR2P30874 369 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 RAB15P59190 212 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 ZNF45Q02386 682 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 TATDN3Q17R31 274 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 ZNF774Q6NX45 483 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 KCTD18Q6PI47 426 aaPredicted RBP9.14□□□□□ -0.95
RFFL-212ENST00000584655 STAC2Q6ZMT1 411 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 CMIPQ8IY22 773 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 OR52B4Q8NGK2 314 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 GPR148Q8TDV2 347 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 C17orf50Q8WW18 174 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 KIAA1143Q96AT1 154 aaPredicted RBP9.14□□□□□ -0.95
RFFL-212ENST00000584655 ZNF426Q9BUY5 554 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 SRRQ9GZT4 340 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 GPR84Q9NQS5 396 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 CKLFQ9UBR5 152 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 ZNF629Q9UEG4 869 aaPredicted RBP9.14□□□□□ -0.95
RFFL-212ENST00000584655 ST6GALNAC2Q9UJ37 374 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 GDF2Q9UK05 429 aaPredicted RBP9.14□□□□□ -0.95
RFFL-212ENST00000584655 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 ANKUB1A6NFN9 424 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 PCP4L1A6NKN8 68 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 AQP8O94778 261 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 KIR3DL2P43630 455 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 PTH2RP49190 550 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 VEGFCP49767 419 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 PER3P56645 1201 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 HSF2Q03933 536 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 SNTB2Q13425 540 aaKnown RBP9.14□□□□□ -0.95
RFFL-212ENST00000584655 ALKBH6Q3KRA9 238 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 OR52W1Q6IF63 320 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 VHLLQ6RSH7 139 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 CCDC190Q86UF4 302 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 OR56B4Q8NH76 319 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 OTOSQ8NHW6 89 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 SETD6Q8TBK2 473 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 NUDCD2Q8WVJ2 157 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 CACNG6Q9BXT2 260 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 OR52A1Q9UKL2 312 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 CCDC187A0A096LP49 1063 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 GABRR1P24046 479 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 ZNF121P58317 390 aaPredicted RBP9.14□□□□□ -0.95
RFFL-212ENST00000584655 MC2RQ01718 297 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 CEACAM16Q2WEN9 425 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 TEX19Q8NA77 164 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 SEC22CQ9BRL7 303 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 RAB33BQ9H082 229 aa9.14□□□□□ -0.95
RFFL-212ENST00000584655 EXOGQ9Y2C4 368 aaKnown RBP9.14□□□□□ -0.95
RFFL-212ENST00000584655 LRRK2Q5S007 2527 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 ANKRD34BA5PLL1 514 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 INMT-MINDY4F8WBC2 141 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 GTF2F2P13984 249 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 PITPNBP48739 271 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms