RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 DIRC2Q96SL1 478 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 EGLN1Q9GZT9 426 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 TUBG2Q9NRH3 451 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 DCAF13Q9NV06 445 aaKnown RBP9.45□□□□□ -0.9
CCDC47-206ENST00000584112 TREM2Q9NZC2 230 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 ADA2Q9NZK5 511 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 PDP1Q9P0J1 537 aaPredicted RBP9.45□□□□□ -0.9
CCDC47-206ENST00000584112 EGFL7Q9UHF1 273 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 ZDHHC8Q9ULC8 765 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 AURKCQ9UQB9 309 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 ADAM18Q9Y3Q7 739 aa9.45□□□□□ -0.9
CCDC47-206ENST00000584112 TRAV20A0A0B4J274 112 aa9.44□□□□□ -0.9
CCDC47-206ENST00000584112 TEX13CA0A0J9YWL9 993 aa9.44□□□□□ -0.9
CCDC47-206ENST00000584112 SGCEO43556 437 aa9.44□□□□□ -0.9
CCDC47-206ENST00000584112 DOK2O60496 412 aa9.44□□□□□ -0.9
CCDC47-206ENST00000584112 ABHD16AO95870 558 aa9.44□□□□□ -0.9
CCDC47-206ENST00000584112 MSMBP08118 114 aa9.44□□□□□ -0.9
CCDC47-206ENST00000584112 ADH4P08319 380 aa9.44□□□□□ -0.9
CCDC47-206ENST00000584112 GSTM3P21266 225 aa9.44□□□□□ -0.9
CCDC47-206ENST00000584112 MPV17P39210 176 aa9.44□□□□□ -0.9
CCDC47-206ENST00000584112 MMP15P51511 669 aa9.44□□□□□ -0.9
CCDC47-206ENST00000584112 SMIM11AP58511 58 aa9.44□□□□□ -0.9
CCDC47-206ENST00000584112 COL10A1Q03692 680 aa9.44□□□□□ -0.9
CCDC47-206ENST00000584112 AQP6Q13520 282 aa9.44□□□□□ -0.9
CCDC47-206ENST00000584112 KRR1Q13601 381 aaKnown RBP9.44□□□□□ -0.9
CCDC47-206ENST00000584112 RFPL4BQ6ZWI9 263 aa9.44□□□□□ -0.9
CCDC47-206ENST00000584112 ADCK1Q86TW2 530 aa9.44□□□□□ -0.9
CCDC47-206ENST00000584112 TEX29Q8N6K0 151 aa9.44□□□□□ -0.9
CCDC47-206ENST00000584112 TAF15Q92804 592 aaKnown RBP eCLIP9.44□□□□□ -0.9
CCDC47-206ENST00000584112 RAB1CQ92928 201 aa9.44□□□□□ -0.9
CCDC47-206ENST00000584112 RSRC1Q96IZ7 334 aaKnown RBP9.44□□□□□ -0.9
CCDC47-206ENST00000584112 COG8Q96MW5 612 aa9.44□□□□□ -0.9
CCDC47-206ENST00000584112 GPX7Q96SL4 187 aaPredicted RBP9.44□□□□□ -0.9
CCDC47-206ENST00000584112 C1QTNF5Q9BXJ0 243 aa9.44□□□□□ -0.9
CCDC47-206ENST00000584112 OR2J1Q9GZK6 312 aa9.44□□□□□ -0.9
CCDC47-206ENST00000584112 FAM107BQ9H098 131 aa9.44□□□□□ -0.9
CCDC47-206ENST00000584112 MMP27Q9H306 513 aa9.44□□□□□ -0.9
CCDC47-206ENST00000584112 NRIP3Q9NQ35 241 aa9.44□□□□□ -0.9
CCDC47-206ENST00000584112 TBCCD1Q9NVR7 557 aa9.44□□□□□ -0.9
CCDC47-206ENST00000584112 HIF1ANQ9NWT6 349 aa9.44□□□□□ -0.9
CCDC47-206ENST00000584112 NDUFAF4Q9P032 175 aa9.44□□□□□ -0.9
CCDC47-206ENST00000584112 SIGLEC7Q9Y286 467 aa9.44□□□□□ -0.9
CCDC47-206ENST00000584112 DNAH3Q8TD57 4116 aa9.44□□□□□ -0.9
CCDC47-206ENST00000584112 LYSTQ99698 3801 aa9.44□□□□□ -0.9
CCDC47-206ENST00000584112 WNT9BO14905 357 aa9.43□□□□□ -0.9
CCDC47-206ENST00000584112 SPRY3O43610 288 aa9.43□□□□□ -0.9
CCDC47-206ENST00000584112 TIMM8AO60220 97 aaPredicted RBP9.43□□□□□ -0.9
CCDC47-206ENST00000584112 SNX3O60493 162 aa9.43□□□□□ -0.9
CCDC47-206ENST00000584112 PTP4A3O75365 173 aa9.43□□□□□ -0.9
CCDC47-206ENST00000584112 KHDRBS3O75525 346 aaKnown RBP9.43□□□□□ -0.9
CCDC47-206ENST00000584112 IGHV1-46P01743 117 aa9.43□□□□□ -0.9
CCDC47-206ENST00000584112 CTLA4P16410 223 aa9.43□□□□□ -0.9
CCDC47-206ENST00000584112 ZNF26P17031 533 aaPredicted RBP9.43□□□□□ -0.9
CCDC47-206ENST00000584112 OMPP47874 163 aa9.43□□□□□ -0.9
CCDC47-206ENST00000584112 HTR5AP47898 357 aa9.43□□□□□ -0.9
CCDC47-206ENST00000584112 RPS6KA3P51812 740 aa9.43□□□□□ -0.9
CCDC47-206ENST00000584112 LMO4P61968 165 aa9.43□□□□□ -0.9
CCDC47-206ENST00000584112 LSM6P62312 80 aaKnown RBP9.43□□□□□ -0.9
CCDC47-206ENST00000584112 MVKQ03426 396 aa9.43□□□□□ -0.9
CCDC47-206ENST00000584112 ACSM5Q6NUN0 579 aa9.43□□□□□ -0.9
CCDC47-206ENST00000584112 PGM2L1Q6PCE3 622 aa9.43□□□□□ -0.9
CCDC47-206ENST00000584112 SHQ1Q6PI26 577 aaKnown RBP9.43□□□□□ -0.9
CCDC47-206ENST00000584112 DNM1P34Q6PK57 102 aa9.43□□□□□ -0.9
CCDC47-206ENST00000584112 DPY19L2P2Q6ZN68 376 aa9.43□□□□□ -0.9
CCDC47-206ENST00000584112 TSEN54Q7Z6J9 526 aaKnown RBP9.43□□□□□ -0.9
CCDC47-206ENST00000584112 CPLX4Q7Z7G2 160 aa9.43□□□□□ -0.9
CCDC47-206ENST00000584112 GLB1L2Q8IW92 636 aa9.43□□□□□ -0.9
CCDC47-206ENST00000584112 MRAPQ8TCY5 172 aa9.43□□□□□ -0.9
CCDC47-206ENST00000584112 GTF3AQ92664 365 aaKnown RBP9.43□□□□□ -0.9
CCDC47-206ENST00000584112 RASD2Q96D21 266 aa9.43□□□□□ -0.9
CCDC47-206ENST00000584112 C7orf34Q96L11 122 aa9.43□□□□□ -0.9
CCDC47-206ENST00000584112 DHRS1Q96LJ7 313 aa9.43□□□□□ -0.9
CCDC47-206ENST00000584112 LRRC37BQ96QE4 947 aa9.43□□□□□ -0.9
CCDC47-206ENST00000584112 ZNF665Q9H7R5 613 aa9.43□□□□□ -0.9
CCDC47-206ENST00000584112 GORASP2Q9H8Y8 452 aa9.43□□□□□ -0.9
CCDC47-206ENST00000584112 LPAR2Q9HBW0 351 aa9.43□□□□□ -0.9
CCDC47-206ENST00000584112 EMC7Q9NPA0 242 aa9.43□□□□□ -0.9
CCDC47-206ENST00000584112 PLEK2Q9NYT0 353 aa9.43□□□□□ -0.9
CCDC47-206ENST00000584112 VSX1Q9NZR4 365 aaPredicted RBP9.43□□□□□ -0.9
CCDC47-206ENST00000584112 MAGEL2Q9UJ55 1249 aa9.43□□□□□ -0.9
CCDC47-206ENST00000584112 WIPI2Q9Y4P8 454 aa9.43□□□□□ -0.9
CCDC47-206ENST00000584112 TRBV4-1A0A0J9YWV2 114 aa9.42□□□□□ -0.9
CCDC47-206ENST00000584112 UNC119BA6NIH7 251 aa9.42□□□□□ -0.9
CCDC47-206ENST00000584112 ZSCAN5BA6NJL1 495 aa9.42□□□□□ -0.9
CCDC47-206ENST00000584112 J3QW42 95 aa9.42□□□□□ -0.9
CCDC47-206ENST00000584112 SOCS2O14508 198 aa9.42□□□□□ -0.9
CCDC47-206ENST00000584112 SLC16A7O60669 478 aa9.42□□□□□ -0.9
CCDC47-206ENST00000584112 TXNDC12O95881 172 aa9.42□□□□□ -0.9
CCDC47-206ENST00000584112 PNPP00491 289 aa9.42□□□□□ -0.9
CCDC47-206ENST00000584112 NGFP01138 241 aa9.42□□□□□ -0.9
CCDC47-206ENST00000584112 SCG5P05408 212 aa9.42□□□□□ -0.9
CCDC47-206ENST00000584112 CD55P08174 381 aa9.42□□□□□ -0.9
CCDC47-206ENST00000584112 HSD17B1P14061 328 aa9.42□□□□□ -0.9
CCDC47-206ENST00000584112 TNFSF4P23510 183 aa9.42□□□□□ -0.9
CCDC47-206ENST00000584112 CRABP1P29762 137 aa9.42□□□□□ -0.9
CCDC47-206ENST00000584112 MTX3Q5HYI7 312 aa9.42□□□□□ -0.9
CCDC47-206ENST00000584112 SAMD4BQ5PRF9 694 aaKnown RBP9.42□□□□□ -0.9
CCDC47-206ENST00000584112 AVPI1Q5T686 147 aa9.42□□□□□ -0.9
CCDC47-206ENST00000584112 SMARCD3Q6STE5 483 aa9.42□□□□□ -0.9
CCDC47-206ENST00000584112 USP43Q70EL4 1123 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms