RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	MRGPRF	Q96AM1	343 aa		10.48	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	RASD2	Q96D21	266 aa		10.48	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	PELI1	Q96FA3	418 aa		10.48	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	CPNE2	Q96FN4	548 aa	Predicted RBP	10.48	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	MRGPRX4	Q96LA9	322 aa		10.48	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	SLC38A3	Q99624	504 aa		10.48	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	C2orf88	Q9BSF0	95 aa		10.48	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	HIPK2	Q9H2X6	1198 aa		10.48	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	DLL4	Q9NR61	685 aa		10.48	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	ING1	Q9UK53	422 aa	Predicted RBP	10.48	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	FBXL3	Q9UKT7	428 aa		10.48	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	PLEKHA6	Q9Y2H5	1048 aa		10.48	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	RP1	P56715	2156 aa		10.48	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	OR6C76	A6NM76	312 aa		10.48	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	METTL12	A8MUP2	240 aa		10.48	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	MCIDAS	D6RGH6	385 aa		10.48	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	TGFBR3L	H3BV60	316 aa		10.48	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	GPANK1	O95872	356 aa		10.48	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	CD27	P26842	260 aa		10.48	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	RORA	P35398	523 aa		10.48	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	CEACAM3	P40198	252 aa		10.48	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	AP3S2	P59780	193 aa		10.48	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	RPS15A	P62244	130 aa	Known RBP	10.48	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	BAMBI	Q13145	260 aa		10.48	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	ARHGAP11B	Q3KRB8	267 aa		10.48	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	FHL5	Q5TD97	284 aa		10.48	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	RNF44	Q7L0R7	432 aa		10.48	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	OOSP2	Q86WS3	158 aa		10.48	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	OR1N1	Q8NGS0	311 aa		10.48	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	OR9A4	Q8NGU2	314 aa		10.48	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	RNF125	Q96EQ8	232 aa		10.48	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	GPR137	Q96N19	417 aa		10.48	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	RBP7	Q96R05	134 aa		10.48	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	PARD6A	Q9NPB6	346 aa		10.48	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	LYAR	Q9NX58	379 aa	Known RBP	10.48	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	WNT16	Q9UBV4	365 aa		10.48	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	ELF5	Q9UKW6	265 aa	Predicted RBP	10.48	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	MED31	Q9Y3C7	131 aa		10.48	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063		A0A1B0GW15	77 aa		10.47	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	FLRT2	O43155	660 aa		10.47	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	HEXA	P06865	529 aa		10.47	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	SRM	P19623	302 aa		10.47	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	DCTD	P32321	178 aa		10.47	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	NUTF2	P61970	127 aa	Known RBP	10.47	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	BDH1	Q02338	343 aa		10.47	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	KIR2DS3	Q14952	304 aa		10.47	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	APOOL	Q6UXV4	268 aa		10.47	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	ACOT12	Q8WYK0	555 aa		10.47	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	MOAP1	Q96BY2	351 aa		10.47	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	ZNF350	Q9GZX5	532 aa		10.47	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	C20orf85	Q9H1P6	137 aa		10.47	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	CLEC4M	Q9H2X3	399 aa	Predicted RBP	10.47	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	METTL8	Q9H825	291 aa	Known RBP	10.47	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	FSCN3	Q9NQT6	498 aa		10.47	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	CMC2	Q9NRP2	79 aa		10.47	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	RDH8	Q9NYR8	311 aa		10.47	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	HCN3	Q9P1Z3	774 aa		10.47	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	C17orf51	A8MQB3	221 aa		10.47	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063		H0Y8G0	127 aa		10.47	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	EIF1AY	O14602	144 aa	Known RBP	10.47	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	PLPP2	O43688	288 aa		10.47	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	KHDRBS3	O75525	346 aa	Known RBP	10.47	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	MT-ATP6	P00846	226 aa		10.47	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	SMIM10L1	P0DMW3	83 aa		10.47	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	ST6GAL1	P15907	406 aa		10.47	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	PSMB6	P28072	239 aa		10.47	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	ATP5J2	P56134	94 aa		10.47	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	ALKAL2	Q6UX46	152 aa		10.47	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	OR52R1	Q8NGF1	315 aa		10.47	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	RNASE8	Q8TDE3	154 aa	Known RBP	10.47	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	PAQR8	Q8TEZ7	354 aa		10.47	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	TM4SF19	Q96DZ7	209 aa		10.47	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	MISP3	Q96FF7	219 aa		10.47	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	SMIM10	Q96HG1	83 aa		10.47	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	ULBP3	Q9BZM4	244 aa		10.47	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	CALML5	Q9NZT1	146 aa		10.47	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	COL4A2	P08572	1712 aa		10.46	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063		A0A1B0GWA3	101 aa		10.46	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063		A0A1W2PPQ1	181 aa		10.46	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	PRR32	B1ATL7	298 aa		10.46	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	OR10H2	O60403	315 aa		10.46	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	ACSM1	Q08AH1	577 aa		10.46	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	MGAT2	Q10469	447 aa		10.46	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	POU4F2	Q12837	409 aa		10.46	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	ARL6IP1	Q15041	203 aa		10.46	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	ELOC	Q15369	112 aa		10.46	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	MEP1B	Q16820	701 aa		10.46	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	MS4A15	Q8N5U1	240 aa		10.46	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	WDSUB1	Q8N9V3	476 aa		10.46	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	COQ8A	Q8NI60	647 aa		10.46	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	GLMP	Q8WWB7	406 aa		10.46	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	TGM7	Q96PF1	710 aa		10.46	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	B3GNT2	Q9NY97	397 aa		10.46	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	RNF215	Q9Y6U7	377 aa		10.46	□□□□□ -0.73
CDK5RAP3-231	ENST00000584063	CBY3	A6NI87	242 aa		10.46	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	BLOC1S5-TXNDC5	H3BN57	136 aa		10.46	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	STX11	O75558	287 aa		10.46	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	BTG1	P62324	171 aa		10.46	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	PRICKLE4	Q2TBC4	344 aa		10.46	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	ALG10B	Q5I7T1	473 aa		10.46	□□□□□ -0.74

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