RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 HLA-DQA1P01909 254 aa2.21□□□□□ -2.06
PPP4R1-227ENST00000583988 CD74P04233 296 aa2.21□□□□□ -2.06
PPP4R1-227ENST00000583988 ANXA5P08758 320 aa2.21□□□□□ -2.06
PPP4R1-227ENST00000583988 CD3GP09693 182 aa2.21□□□□□ -2.06
PPP4R1-227ENST00000583988 LINC00869P0C866 280 aa2.21□□□□□ -2.06
PPP4R1-227ENST00000583988 C1GALT1C1LP0DN25 315 aa2.21□□□□□ -2.06
PPP4R1-227ENST00000583988 MYL2P10916 166 aa2.21□□□□□ -2.06
PPP4R1-227ENST00000583988 NPY1RP25929 384 aa2.21□□□□□ -2.06
PPP4R1-227ENST00000583988 MRPL19P49406 292 aaKnown RBP2.21□□□□□ -2.06
PPP4R1-227ENST00000583988 P2RX1P51575 399 aa2.21□□□□□ -2.06
PPP4R1-227ENST00000583988 KRTAP10-10P60014 251 aa2.21□□□□□ -2.06
PPP4R1-227ENST00000583988 IFT88Q13099 833 aa2.21□□□□□ -2.06
PPP4R1-227ENST00000583988 KIR2DS1Q14954 304 aa2.21□□□□□ -2.06
PPP4R1-227ENST00000583988 CHRNA6Q15825 494 aa2.21□□□□□ -2.06
PPP4R1-227ENST00000583988 FHOD3Q2V2M9 1422 aa2.21□□□□□ -2.06
PPP4R1-227ENST00000583988 COX19Q49B96 90 aa2.21□□□□□ -2.06
PPP4R1-227ENST00000583988 LRRC66Q68CR7 880 aa2.21□□□□□ -2.06
PPP4R1-227ENST00000583988 DNAJC24Q6P3W2 148 aa2.21□□□□□ -2.06
PPP4R1-227ENST00000583988 CEMP1Q6PRD7 247 aaPredicted RBP2.21□□□□□ -2.06
PPP4R1-227ENST00000583988 NCCRP1Q6ZVX7 275 aaPredicted RBP2.21□□□□□ -2.06
PPP4R1-227ENST00000583988 NEGR1Q7Z3B1 354 aa2.21□□□□□ -2.06
PPP4R1-227ENST00000583988 BBS5Q8N3I7 341 aa2.21□□□□□ -2.06
PPP4R1-227ENST00000583988 GATSQ8NAP1 163 aa2.21□□□□□ -2.06
PPP4R1-227ENST00000583988 ZNF461Q8TAF7 563 aa2.21□□□□□ -2.06
PPP4R1-227ENST00000583988 SYNPRQ8TBG9 265 aa2.21□□□□□ -2.06
PPP4R1-227ENST00000583988 RNF139Q8WU17 664 aa2.21□□□□□ -2.06
PPP4R1-227ENST00000583988 TMEM230Q96A57 120 aa2.21□□□□□ -2.06
PPP4R1-227ENST00000583988 C8orf44Q96CB5 159 aa2.21□□□□□ -2.06
PPP4R1-227ENST00000583988 TMEM9BQ9NQ34 198 aa2.21□□□□□ -2.06
PPP4R1-227ENST00000583988 SIRT7Q9NRC8 400 aa2.21□□□□□ -2.06
PPP4R1-227ENST00000583988 TRMT112Q9UI30 125 aaKnown RBP2.21□□□□□ -2.06
PPP4R1-227ENST00000583988 GAKO14976 1311 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 BRWD3Q6RI45 1802 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 IGLV1-36A0A0B4J1U3 117 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 IGHV1OR15-9A0A0B4J2B8 117 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 SCAMP2O15127 329 aaKnown RBP2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 HUS1O60921 280 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 SEMA3DO95025 777 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 APCSP02743 223 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 ADRA2AP08913 450 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 ACSM4P0C7M7 580 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 OR56A5P0C7T3 313 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 PABPC4LP0CB38 370 aaKnown RBP2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 ZNF286BP0CG31 522 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 CEACAM3P40198 252 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 HCAR3P49019 387 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 RND2P52198 227 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 SYNJ2BPP57105 145 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 PRR3P79522 188 aaKnown RBP2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 SP4Q02446 784 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 PRSS8Q16651 343 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 XKR4Q5GH76 650 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 SPANXN2Q5MJ10 180 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 PPM1LQ5SGD2 360 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 H3F3CQ6NXT2 135 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 PRMT9Q6P2P2 845 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 BZW1Q7L1Q6 419 aaKnown RBP2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 SSX9Q7RTT3 188 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 HMGN2P46Q86SG4 172 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 RNF182Q8N6D2 247 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 METTL13Q8N6R0 699 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 ZNF615Q8N8J6 731 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 NECAP1Q8NC96 275 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 CHST4Q8NCG5 386 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 DCPSQ96C86 337 aaKnown RBP2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 OR10C1Q96KK4 312 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 TIMM17AQ99595 171 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 DOK1Q99704 481 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 MICU1Q9BPX6 476 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 ANKRD60Q9BZ19 345 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 NEUROG2Q9H2A3 272 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 TMEM185BQ9H7F4 350 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 RAB20Q9NX57 234 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 LYARQ9NX58 379 aaKnown RBP2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 SLC17A4Q9Y2C5 497 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 PALLDQ8WX93 1383 aa2.2□□□□□ -2.06
PPP4R1-227ENST00000583988 DOCK9Q9BZ29 2069 aa2.19□□□□□ -2.06
PPP4R1-227ENST00000583988 IGLV3-12A0A075B6K2 115 aa2.19□□□□□ -2.06
PPP4R1-227ENST00000583988 C7orf66A4D0T2 115 aa2.19□□□□□ -2.06
PPP4R1-227ENST00000583988 DNASE2O00115 360 aaPredicted RBP2.19□□□□□ -2.06
PPP4R1-227ENST00000583988 RRP8O43159 456 aaKnown RBP2.19□□□□□ -2.06
PPP4R1-227ENST00000583988 CDC40O60508 579 aaKnown RBP eCLIP2.19□□□□□ -2.06
PPP4R1-227ENST00000583988 MPZL1O95297 269 aa2.19□□□□□ -2.06
PPP4R1-227ENST00000583988 ERGP11308 486 aa2.19□□□□□ -2.06
PPP4R1-227ENST00000583988 OPRK1P41145 380 aa2.19□□□□□ -2.06
PPP4R1-227ENST00000583988 CXCL12P48061 93 aa2.19□□□□□ -2.06
PPP4R1-227ENST00000583988 SEMG2Q02383 582 aa2.19□□□□□ -2.06
PPP4R1-227ENST00000583988 ZNF816Q0VGE8 651 aaPredicted RBP2.19□□□□□ -2.06
PPP4R1-227ENST00000583988 TRAM2Q15035 370 aa2.19□□□□□ -2.06
PPP4R1-227ENST00000583988 PSMD5Q16401 504 aa2.19□□□□□ -2.06
PPP4R1-227ENST00000583988 TCEAL5Q5H9L2 206 aa2.19□□□□□ -2.06
PPP4R1-227ENST00000583988 PRAMEF20Q5VT98 475 aa2.19□□□□□ -2.06
PPP4R1-227ENST00000583988 AP1ARQ63HQ0 302 aa2.19□□□□□ -2.06
PPP4R1-227ENST00000583988 ZNF880Q6PDB4 577 aa2.19□□□□□ -2.06
PPP4R1-227ENST00000583988 PLET1Q6UQ28 207 aa2.19□□□□□ -2.06
PPP4R1-227ENST00000583988 SPESP1Q6UW49 350 aa2.19□□□□□ -2.06
PPP4R1-227ENST00000583988 CDKL3Q8IVW4 592 aaPredicted RBP2.19□□□□□ -2.06
PPP4R1-227ENST00000583988 CMTM1Q8IZ96 169 aa2.19□□□□□ -2.06
PPP4R1-227ENST00000583988 OR8U1Q8NH10 309 aa2.19□□□□□ -2.06
PPP4R1-227ENST00000583988 LILRB4Q8NHJ6 448 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms