RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 RAB35Q15286 201 aa18.65■□□□□ 0.58
TSEN54-208ENST00000583173 SWI5Q1ZZU3 235 aa18.65■□□□□ 0.58
TSEN54-208ENST00000583173 ELFN2Q5R3F8 820 aa18.65■□□□□ 0.58
TSEN54-208ENST00000583173 SLC25A30Q5SVS4 291 aa18.65■□□□□ 0.58
TSEN54-208ENST00000583173 NXNL2Q5VZ03 156 aa18.65■□□□□ 0.58
TSEN54-208ENST00000583173 C11orf71Q6IPW1 123 aa18.65■□□□□ 0.58
TSEN54-208ENST00000583173 PACRGLQ8N7B6 248 aa18.65■□□□□ 0.58
TSEN54-208ENST00000583173 OR8J1Q8NGP2 316 aa18.65■□□□□ 0.58
TSEN54-208ENST00000583173 OR6K6Q8NGW6 343 aa18.65■□□□□ 0.58
TSEN54-208ENST00000583173 TRUB1Q8WWH5 349 aaKnown RBP18.65■□□□□ 0.58
TSEN54-208ENST00000583173 ZMYND19Q96E35 227 aaPredicted RBP18.65■□□□□ 0.58
TSEN54-208ENST00000583173 RDH12Q96NR8 316 aa18.65■□□□□ 0.58
TSEN54-208ENST00000583173 IL4I1Q96RQ9 567 aa18.65■□□□□ 0.58
TSEN54-208ENST00000583173 TRAF4Q9BUZ4 470 aaPredicted RBP18.65■□□□□ 0.58
TSEN54-208ENST00000583173 CDH20Q9HBT6 801 aa18.65■□□□□ 0.58
TSEN54-208ENST00000583173 C8orf4Q9NR00 106 aa18.65■□□□□ 0.58
TSEN54-208ENST00000583173 FAM118AQ9NWS6 357 aa18.65■□□□□ 0.58
TSEN54-208ENST00000583173 EDARQ9UNE0 448 aa18.65■□□□□ 0.58
TSEN54-208ENST00000583173 DSCAMO60469 2012 aa18.65■□□□□ 0.58
TSEN54-208ENST00000583173 C5orf49A4QMS7 147 aa18.64■□□□□ 0.57
TSEN54-208ENST00000583173 SLC16A6O15403 523 aa18.64■□□□□ 0.57
TSEN54-208ENST00000583173 DOK2O60496 412 aa18.64■□□□□ 0.57
TSEN54-208ENST00000583173 TMCC2O75069 709 aa18.64■□□□□ 0.57
TSEN54-208ENST00000583173 PAX1P15863 534 aa18.64■□□□□ 0.57
TSEN54-208ENST00000583173 APOFQ13790 326 aa18.64■□□□□ 0.57
TSEN54-208ENST00000583173 KLHL12Q53G59 568 aa18.64■□□□□ 0.57
TSEN54-208ENST00000583173 KRT80Q6KB66 452 aa18.64■□□□□ 0.57
TSEN54-208ENST00000583173 MEPCEQ7L2J0 689 aaKnown RBP18.64■□□□□ 0.57
TSEN54-208ENST00000583173 OR2AJ1Q8NGZ0 328 aa18.64■□□□□ 0.57
TSEN54-208ENST00000583173 ST7LQ8TDW4 575 aa18.64■□□□□ 0.57
TSEN54-208ENST00000583173 SLC7A6Q92536 515 aa18.64■□□□□ 0.57
TSEN54-208ENST00000583173 COQ7Q99807 217 aa18.64■□□□□ 0.57
TSEN54-208ENST00000583173 LAMP3Q9UQV4 416 aa18.64■□□□□ 0.57
TSEN54-208ENST00000583173 SPEF1Q9Y4P9 236 aa18.64■□□□□ 0.57
TSEN54-208ENST00000583173 ANKRD17O75179 2603 aaKnown RBP18.64■□□□□ 0.57
TSEN54-208ENST00000583173 GPRIN2O60269 458 aa18.63■□□□□ 0.57
TSEN54-208ENST00000583173 DNASE1P24855 282 aa18.63■□□□□ 0.57
TSEN54-208ENST00000583173 SERPINF1P36955 418 aa18.63■□□□□ 0.57
TSEN54-208ENST00000583173 SLC34A1Q06495 639 aa18.63■□□□□ 0.57
TSEN54-208ENST00000583173 SNTB2Q13425 540 aaKnown RBP18.63■□□□□ 0.57
TSEN54-208ENST00000583173 KEAP1Q14145 624 aa18.63■□□□□ 0.57
TSEN54-208ENST00000583173 LRRC36Q1X8D7 754 aa18.63■□□□□ 0.57
TSEN54-208ENST00000583173 ZNF101Q8IZC7 436 aa18.63■□□□□ 0.57
TSEN54-208ENST00000583173 MUC15Q8N387 334 aa18.63■□□□□ 0.57
TSEN54-208ENST00000583173 GALNT4Q8N4A0 578 aa18.63■□□□□ 0.57
TSEN54-208ENST00000583173 PIGTQ969N2 578 aa18.63■□□□□ 0.57
TSEN54-208ENST00000583173 C4orf45Q96LM5 186 aa18.63■□□□□ 0.57
TSEN54-208ENST00000583173 INTS14Q96SY0 518 aa18.63■□□□□ 0.57
TSEN54-208ENST00000583173 HDHD2Q9H0R4 259 aa18.63■□□□□ 0.57
TSEN54-208ENST00000583173 RNPEPL1Q9HAU8 725 aa18.63■□□□□ 0.57
TSEN54-208ENST00000583173 CBLN4Q9NTU7 201 aa18.63■□□□□ 0.57
TSEN54-208ENST00000583173 ZNF701Q9NV72 531 aaPredicted RBP18.63■□□□□ 0.57
TSEN54-208ENST00000583173 HAO2Q9NYQ3 351 aa18.63■□□□□ 0.57
TSEN54-208ENST00000583173 POLR1DQ9Y2S0 133 aa18.63■□□□□ 0.57
TSEN54-208ENST00000583173 LOC100130705A0A1B0GUX0 176 aa18.62■□□□□ 0.57
TSEN54-208ENST00000583173 NGFP01138 241 aa18.62■□□□□ 0.57
TSEN54-208ENST00000583173 DBHP09172 617 aa18.62■□□□□ 0.57
TSEN54-208ENST00000583173 OR4A8P0C604 315 aa18.62■□□□□ 0.57
TSEN54-208ENST00000583173 GABRB1P18505 474 aa18.62■□□□□ 0.57
TSEN54-208ENST00000583173 RAD52P43351 418 aa18.62■□□□□ 0.57
TSEN54-208ENST00000583173 HTR5AP47898 357 aa18.62■□□□□ 0.57
TSEN54-208ENST00000583173 SNRPGP62308 76 aaKnown RBP18.62■□□□□ 0.57
TSEN54-208ENST00000583173 GGTLC2Q14390 218 aa18.62■□□□□ 0.57
TSEN54-208ENST00000583173 EFNB3Q15768 340 aa18.62■□□□□ 0.57
TSEN54-208ENST00000583173 AGAP6Q5VW22 663 aa18.62■□□□□ 0.57
TSEN54-208ENST00000583173 DPY19L4Q7Z388 723 aa18.62■□□□□ 0.57
TSEN54-208ENST00000583173 DCXRQ7Z4W1 244 aa18.62■□□□□ 0.57
TSEN54-208ENST00000583173 FBXL14Q8N1E6 418 aa18.62■□□□□ 0.57
TSEN54-208ENST00000583173 NRG4Q8WWG1 115 aa18.62■□□□□ 0.57
TSEN54-208ENST00000583173 DOK1Q99704 481 aa18.62■□□□□ 0.57
TSEN54-208ENST00000583173 DDX28Q9NUL7 540 aaKnown RBP18.62■□□□□ 0.57
TSEN54-208ENST00000583173 FAIMQ9NVQ4 179 aa18.62■□□□□ 0.57
TSEN54-208ENST00000583173 TBCCD1Q9NVR7 557 aa18.62■□□□□ 0.57
TSEN54-208ENST00000583173 BEX4Q9NWD9 120 aaPredicted RBP18.62■□□□□ 0.57
TSEN54-208ENST00000583173 SMPD3Q9NY59 655 aaPredicted RBP18.62■□□□□ 0.57
TSEN54-208ENST00000583173 SELENOFO60613 162 aa18.61■□□□□ 0.57
TSEN54-208ENST00000583173 SMPD2O60906 423 aa18.61■□□□□ 0.57
TSEN54-208ENST00000583173 FAM157BP0CG42 384 aa18.61■□□□□ 0.57
TSEN54-208ENST00000583173 CCNOP22674 350 aa18.61■□□□□ 0.57
TSEN54-208ENST00000583173 CDC42P60953 191 aa18.61■□□□□ 0.57
TSEN54-208ENST00000583173 GALK2Q01415 458 aa18.61■□□□□ 0.57
TSEN54-208ENST00000583173 ECH1Q13011 328 aa18.61■□□□□ 0.57
TSEN54-208ENST00000583173 DEFB113Q30KQ7 82 aa18.61■□□□□ 0.57
TSEN54-208ENST00000583173 VHLLQ6RSH7 139 aa18.61■□□□□ 0.57
TSEN54-208ENST00000583173 COLCA1Q6ZS62 124 aa18.61■□□□□ 0.57
TSEN54-208ENST00000583173 SHFQ7M4L6 423 aa18.61■□□□□ 0.57
TSEN54-208ENST00000583173 ERI1Q8IV48 349 aaKnown RBP18.61■□□□□ 0.57
TSEN54-208ENST00000583173 RHOXF1Q8NHV9 184 aa18.61■□□□□ 0.57
TSEN54-208ENST00000583173 ZNF582Q96NG8 517 aaPredicted RBP18.61■□□□□ 0.57
TSEN54-208ENST00000583173 DCLRE1CQ96SD1 692 aaKnown RBP18.61■□□□□ 0.57
TSEN54-208ENST00000583173 CCL19Q99731 98 aa18.61■□□□□ 0.57
TSEN54-208ENST00000583173 BCL2L14Q9BZR8 327 aa18.61■□□□□ 0.57
TSEN54-208ENST00000583173 PLK3Q9H4B4 646 aa18.61■□□□□ 0.57
TSEN54-208ENST00000583173 CCDC168Q8NDH2 2452 aa18.61■□□□□ 0.57
TSEN54-208ENST00000583173 MAST4O15021 2626 aa18.6■□□□□ 0.57
TSEN54-208ENST00000583173 USF3Q68DE3 2245 aa18.6■□□□□ 0.57
TSEN54-208ENST00000583173 SPARCP09486 303 aa18.6■□□□□ 0.57
TSEN54-208ENST00000583173 ZNF250P15622 560 aa18.6■□□□□ 0.57
TSEN54-208ENST00000583173 ALOX5APP20292 161 aa18.6■□□□□ 0.57
TSEN54-208ENST00000583173 OTX1P32242 354 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms