RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 CLEC18BQ6UXF7 455 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 ERASQ7Z444 233 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 PAQR7Q86WK9 346 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 ZNF683Q8IZ20 524 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 KDM8Q8N371 416 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 CCDC54Q8NEL0 328 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 WFDC5Q8TCV5 224 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 MCOLN3Q8TDD5 553 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 FGF11Q92914 225 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 CCDC127Q96BQ5 260 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 TMA16Q96EY4 203 aaKnown RBP1.92□□□□□ -2.1
COPS3-217ENST00000583160 TRIM62Q9BVG3 475 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 LHX5Q9H2C1 402 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 RHBGQ9H310 441 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 SUDS3Q9H7L9 328 aaPredicted RBP1.92□□□□□ -2.1
COPS3-217ENST00000583160 TM9SF3Q9HD45 589 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 SIRT7Q9NRC8 400 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 CISHQ9NSE2 258 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 NUDT15Q9NV35 164 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 HS3ST2Q9Y278 367 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 OR51B4Q9Y5P0 310 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 HEBP2Q9Y5Z4 205 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 ZFC3H1O60293 1989 aaKnown RBP1.92□□□□□ -2.1
COPS3-217ENST00000583160 KALRNO60229 2985 aa1.92□□□□□ -2.1
COPS3-217ENST00000583160 SPTA1P02549 2419 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 TRAV40A0A0B4J280 105 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 A0A0U1RQV5 110 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 SPTY2D1-AS1A0A0U1RR47 76 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 VPS37CA5D8V6 355 aaPredicted RBP1.91□□□□□ -2.1
COPS3-217ENST00000583160 PRAMEF26H0Y7S4 382 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 DCTN6O00399 190 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 CETN3O15182 167 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 CALUO43852 315 aaPredicted RBP1.91□□□□□ -2.1
COPS3-217ENST00000583160 CD160O95971 181 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 SLC2A3P11169 496 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 POLR2EP19388 210 aaKnown RBP1.91□□□□□ -2.1
COPS3-217ENST00000583160 PGCP20142 388 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 SHMT2P34897 504 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 GLP1RP43220 463 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 ASMTP46597 345 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 GCLMP48507 274 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 ARRB1P49407 418 aaPredicted RBP1.91□□□□□ -2.1
COPS3-217ENST00000583160 EWSR1Q01844 656 aaKnown RBP eCLIP1.91□□□□□ -2.1
COPS3-217ENST00000583160 EIF3IQ13347 325 aaKnown RBP1.91□□□□□ -2.1
COPS3-217ENST00000583160 RIPK1Q13546 671 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 CUL2Q13617 745 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 STK38Q15208 465 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 CST6Q15828 149 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 ATP6AP1Q15904 470 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 RFX4Q33E94 735 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 GPRC6AQ5T6X5 926 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 PIP5KL1Q5T9C9 394 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 SPOPLQ6IQ16 392 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 PMF1Q6P1K2 205 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 NIPAL3Q6P499 406 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 ZNF620Q6ZNG0 422 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 TPGS1Q6ZTW0 290 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 SETD3Q86TU7 594 aaPredicted RBP1.91□□□□□ -2.1
COPS3-217ENST00000583160 NELFCDQ8IXH7 590 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 SLC25A45Q8N413 288 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 MSANTD4Q8NCY6 345 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 DENND6BQ8NEG7 585 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 OR52B4Q8NGK2 314 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 OR5L2Q8NGL0 311 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 OR4C6Q8NH72 309 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 DDI1Q8WTU0 396 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 ZNF606Q8WXB4 792 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 ISG20Q96AZ6 181 aaKnown RBP1.91□□□□□ -2.1
COPS3-217ENST00000583160 C14orf79Q96F83 325 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 BTN2A3PQ96KV6 586 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 BMFQ96LC9 184 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 SERPINB11Q96P15 392 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 KLF6Q99612 283 aaPredicted RBP1.91□□□□□ -2.1
COPS3-217ENST00000583160 SLC35A5Q9BS91 424 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 ULBP1Q9BZM6 244 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 POLR1EQ9GZS1 481 aaKnown RBP1.91□□□□□ -2.1
COPS3-217ENST00000583160 RAB17Q9H0T7 212 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 NEUROG2Q9H2A3 272 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 ASCL3Q9NQ33 180 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 FAM49BQ9NUQ9 324 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 SOHLH2Q9NX45 425 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 FBXL12Q9NXK8 326 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 ATXN10Q9UBB4 475 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 GGA2Q9UJY4 613 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 MFHAS1Q9Y4C4 1052 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 U3KQA8 63 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 ANKRD36A6QL64 1941 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 MYO18BQ8IUG5 2567 aa1.91□□□□□ -2.1
COPS3-217ENST00000583160 CFAP46Q8IYW2 2715 aa1.9□□□□□ -2.1
COPS3-217ENST00000583160 FLNBO75369 2602 aaKnown RBP1.9□□□□□ -2.1
COPS3-217ENST00000583160 GCN1Q92616 2671 aaKnown RBP1.9□□□□□ -2.1
COPS3-217ENST00000583160 NAV2Q8IVL1 2488 aa1.9□□□□□ -2.11
COPS3-217ENST00000583160 A0A1B0GVL5 298 aa1.9□□□□□ -2.11
COPS3-217ENST00000583160 TSPAN11A1L157 253 aa1.9□□□□□ -2.11
COPS3-217ENST00000583160 RRP8O43159 456 aaKnown RBP1.9□□□□□ -2.11
COPS3-217ENST00000583160 CD5LO43866 347 aa1.9□□□□□ -2.11
COPS3-217ENST00000583160 ENTPD5O75356 428 aa1.9□□□□□ -2.11
COPS3-217ENST00000583160 VPS26AO75436 327 aa1.9□□□□□ -2.11
COPS3-217ENST00000583160 CLDN11O75508 207 aa1.9□□□□□ -2.11
COPS3-217ENST00000583160 ZMPSTE24O75844 475 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms