RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 TRAV27A0A087WT01 109 aa13.49□□□□□ -0.25
SREBF1-221ENST00000583080 C12orf71A8MTZ7 269 aa13.49□□□□□ -0.25
SREBF1-221ENST00000583080 SRRM5B3KS81 715 aa13.49□□□□□ -0.25
SREBF1-221ENST00000583080 COX5BP10606 129 aa13.49□□□□□ -0.25
SREBF1-221ENST00000583080 KRTAP10-3P60369 221 aa13.49□□□□□ -0.25
SREBF1-221ENST00000583080 FHL1Q13642 323 aa13.49□□□□□ -0.25
SREBF1-221ENST00000583080 HLXQ14774 488 aaPredicted RBP13.49□□□□□ -0.25
SREBF1-221ENST00000583080 FAM201AQ5SY85 155 aa13.49□□□□□ -0.25
SREBF1-221ENST00000583080 C1orf94Q6P1W5 598 aa13.49□□□□□ -0.25
SREBF1-221ENST00000583080 BRICD5Q6PL45 260 aa13.49□□□□□ -0.25
SREBF1-221ENST00000583080 FIP1L1Q6UN15 594 aaKnown RBP13.49□□□□□ -0.25
SREBF1-221ENST00000583080 VASH1Q7L8A9 365 aaPredicted RBP13.49□□□□□ -0.25
SREBF1-221ENST00000583080 LRRC8CQ8TDW0 803 aa13.49□□□□□ -0.25
SREBF1-221ENST00000583080 RASSF5Q8WWW0 418 aa13.49□□□□□ -0.25
SREBF1-221ENST00000583080 HAVCR1Q96D42 359 aa13.49□□□□□ -0.25
SREBF1-221ENST00000583080 MEGF10Q96KG7 1140 aa13.49□□□□□ -0.25
SREBF1-221ENST00000583080 PKP2Q99959 881 aa13.49□□□□□ -0.25
SREBF1-221ENST00000583080 CITED1Q99966 193 aa13.49□□□□□ -0.25
SREBF1-221ENST00000583080 TMEM246Q9BRR3 403 aa13.49□□□□□ -0.25
SREBF1-221ENST00000583080 C1RLQ9NZP8 487 aa13.49□□□□□ -0.25
SREBF1-221ENST00000583080 SURF4O15260 269 aa13.48□□□□□ -0.25
SREBF1-221ENST00000583080 SGCEO43556 437 aa13.48□□□□□ -0.25
SREBF1-221ENST00000583080 IFI30P13284 250 aa13.48□□□□□ -0.25
SREBF1-221ENST00000583080 SELEP16581 610 aa13.48□□□□□ -0.25
SREBF1-221ENST00000583080 GUCA1AP43080 201 aaPredicted RBP13.48□□□□□ -0.25
SREBF1-221ENST00000583080 GUCY1A3Q02108 690 aa13.48□□□□□ -0.25
SREBF1-221ENST00000583080 SCRN3Q0VDG4 424 aa13.48□□□□□ -0.25
SREBF1-221ENST00000583080 FAM205BPQ63HN1 556 aa13.48□□□□□ -0.25
SREBF1-221ENST00000583080 RUSC1-AS1Q66K80 236 aa13.48□□□□□ -0.25
SREBF1-221ENST00000583080 OLFML2AQ68BL7 652 aa13.48□□□□□ -0.25
SREBF1-221ENST00000583080 SLC27A4Q6P1M0 643 aa13.48□□□□□ -0.25
SREBF1-221ENST00000583080 SYT9Q86SS6 491 aa13.48□□□□□ -0.25
SREBF1-221ENST00000583080 ATG16L2Q8NAA4 619 aa13.48□□□□□ -0.25
SREBF1-221ENST00000583080 OR4F5Q8NH21 305 aa13.48□□□□□ -0.25
SREBF1-221ENST00000583080 OR51A7Q8NH64 312 aa13.48□□□□□ -0.25
SREBF1-221ENST00000583080 FNDC8Q8TC99 324 aa13.48□□□□□ -0.25
SREBF1-221ENST00000583080 ZDHHC16Q969W1 377 aa13.48□□□□□ -0.25
SREBF1-221ENST00000583080 BPIFA2Q96DR5 249 aa13.48□□□□□ -0.25
SREBF1-221ENST00000583080 CCT8L2Q96SF2 557 aa13.48□□□□□ -0.25
SREBF1-221ENST00000583080 CDADC1Q9BWV3 514 aa13.48□□□□□ -0.25
SREBF1-221ENST00000583080 CHIAQ9BZP6 476 aa13.48□□□□□ -0.25
SREBF1-221ENST00000583080 POLR2J2Q9GZM3 115 aaKnown RBP13.48□□□□□ -0.25
SREBF1-221ENST00000583080 POLR2J3Q9H1A7 115 aaKnown RBP13.48□□□□□ -0.25
SREBF1-221ENST00000583080 PRDM13Q9H4Q3 707 aa13.48□□□□□ -0.25
SREBF1-221ENST00000583080 RABEP2Q9H5N1 569 aa13.48□□□□□ -0.25
SREBF1-221ENST00000583080 BEX1Q9HBH7 125 aa13.48□□□□□ -0.25
SREBF1-221ENST00000583080 A0A1B0GUS0 222 aa13.47□□□□□ -0.25
SREBF1-221ENST00000583080 H0YL77 283 aa13.47□□□□□ -0.25
SREBF1-221ENST00000583080 PITPNBP48739 271 aa13.47□□□□□ -0.25
SREBF1-221ENST00000583080 FGF12P61328 243 aa13.47□□□□□ -0.25
SREBF1-221ENST00000583080 RABL3Q5HYI8 236 aa13.47□□□□□ -0.25
SREBF1-221ENST00000583080 OR2T2Q6IF00 324 aa13.47□□□□□ -0.25
SREBF1-221ENST00000583080 MOGAT3Q86VF5 341 aa13.47□□□□□ -0.25
SREBF1-221ENST00000583080 FITM2Q8N6M3 262 aa13.47□□□□□ -0.25
SREBF1-221ENST00000583080 OR13C2Q8NGS9 318 aa13.47□□□□□ -0.25
SREBF1-221ENST00000583080 NEIL1Q96FI4 390 aaPredicted RBP13.47□□□□□ -0.25
SREBF1-221ENST00000583080 NUDT16L1Q9BRJ7 211 aaKnown RBP13.47□□□□□ -0.25
SREBF1-221ENST00000583080 MMP27Q9H306 513 aa13.47□□□□□ -0.25
SREBF1-221ENST00000583080 PTTG3PQ9NZH4 202 aa13.47□□□□□ -0.25
SREBF1-221ENST00000583080 ARMCX1Q9P291 453 aa13.47□□□□□ -0.25
SREBF1-221ENST00000583080 MIOXQ9UGB7 285 aa13.47□□□□□ -0.25
SREBF1-221ENST00000583080 BAG5Q9UL15 447 aa13.47□□□□□ -0.25
SREBF1-221ENST00000583080 DOCK11Q5JSL3 2073 aa13.47□□□□□ -0.25
SREBF1-221ENST00000583080 KIR2DS1A0A191URI9 304 aa13.46□□□□□ -0.25
SREBF1-221ENST00000583080 A6NIZ1 184 aa13.46□□□□□ -0.25
SREBF1-221ENST00000583080 C22orf46C9J442 243 aa13.46□□□□□ -0.25
SREBF1-221ENST00000583080 MLNRO43193 412 aa13.46□□□□□ -0.25
SREBF1-221ENST00000583080 NDUFA7O95182 113 aa13.46□□□□□ -0.25
SREBF1-221ENST00000583080 DBHP09172 617 aa13.46□□□□□ -0.25
SREBF1-221ENST00000583080 RAC2P15153 192 aa13.46□□□□□ -0.25
SREBF1-221ENST00000583080 TUBG1P23258 451 aa13.46□□□□□ -0.25
SREBF1-221ENST00000583080 PMELP40967 661 aa13.46□□□□□ -0.25
SREBF1-221ENST00000583080 RAP1BP61224 184 aa13.46□□□□□ -0.25
SREBF1-221ENST00000583080 RAP1AP62834 184 aa13.46□□□□□ -0.25
SREBF1-221ENST00000583080 ZNF404Q494X3 552 aa13.46□□□□□ -0.25
SREBF1-221ENST00000583080 ZNF362Q5T0B9 420 aaPredicted RBP13.46□□□□□ -0.25
SREBF1-221ENST00000583080 LYPD2Q6UXB3 125 aa13.46□□□□□ -0.25
SREBF1-221ENST00000583080 Q6YL49 198 aa13.46□□□□□ -0.25
SREBF1-221ENST00000583080 CALHM3Q86XJ0 350 aa13.46□□□□□ -0.25
SREBF1-221ENST00000583080 OR8B3Q8NGG8 313 aa13.46□□□□□ -0.25
SREBF1-221ENST00000583080 C10orf82Q8WW14 230 aa13.46□□□□□ -0.25
SREBF1-221ENST00000583080 OR8B2Q96RD0 313 aa13.46□□□□□ -0.25
SREBF1-221ENST00000583080 TUBG2Q9NRH3 451 aa13.46□□□□□ -0.25
SREBF1-221ENST00000583080 A4GNTQ9UNA3 340 aa13.46□□□□□ -0.25
SREBF1-221ENST00000583080 ADAM18Q9Y3Q7 739 aa13.46□□□□□ -0.25
SREBF1-221ENST00000583080 CLPSL1A2RUU4 121 aa13.45□□□□□ -0.26
SREBF1-221ENST00000583080 OR6C6A6NF89 314 aa13.45□□□□□ -0.26
SREBF1-221ENST00000583080 F5H5P2 479 aa13.45□□□□□ -0.26
SREBF1-221ENST00000583080 IFNL4K9M1U5 179 aa13.45□□□□□ -0.26
SREBF1-221ENST00000583080 M0QZ24 198 aa13.45□□□□□ -0.26
SREBF1-221ENST00000583080 FXYD1O00168 92 aa13.45□□□□□ -0.26
SREBF1-221ENST00000583080 FBP2O00757 339 aa13.45□□□□□ -0.26
SREBF1-221ENST00000583080 CRYBA1P05813 215 aa13.45□□□□□ -0.26
SREBF1-221ENST00000583080 MELTFP08582 738 aa13.45□□□□□ -0.26
SREBF1-221ENST00000583080 CTLA4P16410 223 aa13.45□□□□□ -0.26
SREBF1-221ENST00000583080 PRSS12P56730 875 aa13.45□□□□□ -0.26
SREBF1-221ENST00000583080 HOXA4Q00056 320 aaPredicted RBP13.45□□□□□ -0.26
SREBF1-221ENST00000583080 MESTQ5EB52 335 aa13.45□□□□□ -0.26
SREBF1-221ENST00000583080 NANOGP8Q6NSW7 305 aa13.45□□□□□ -0.26
SREBF1-221ENST00000583080 C1QL4Q86Z23 238 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms