RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 NPIPB4C9JG80 1138 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 FTCDNL1E5RQL4 147 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 SULT2B1O00204 365 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 ARHGEF9O43307 516 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 EIF1BO60739 113 aaKnown RBP9.03□□□□□ -0.96
SS18-221ENST00000582448 GLCEO94923 617 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 IL18BPO95998 194 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 PLGP00747 810 aaPredicted RBP9.03□□□□□ -0.96
SS18-221ENST00000582448 IGHMP01871 453 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 GYPBP06028 91 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 MRPL3P09001 348 aaKnown RBP9.03□□□□□ -0.96
SS18-221ENST00000582448 RFPL3SP0C7P2 107 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 OR2T7P0C7T2 308 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 LIMS3P0CW19 117 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 LIMS4P0CW20 117 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 NR2C1P13056 603 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 SLC2A5P22732 501 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 LIPAP38571 399 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 ASCL1P50553 236 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 TUBA1BP68363 451 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 CSNK2A1P68400 391 aaPredicted RBP9.03□□□□□ -0.96
SS18-221ENST00000582448 BDH1Q02338 343 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 HSF2Q03933 536 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 FOXO1Q12778 655 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 ACKR1Q16570 336 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 DGUOKQ16854 277 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 TMEM176BQ3YBM2 270 aaPredicted RBP9.03□□□□□ -0.96
SS18-221ENST00000582448 ZNF362Q5T0B9 420 aaPredicted RBP9.03□□□□□ -0.96
SS18-221ENST00000582448 PDSS1Q5T2R2 415 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 TMEM225Q6GV28 225 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 SEM1Q6ZVN7 128 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 USP43Q70EL4 1123 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 TUBA1AQ71U36 451 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 FAM122BQ7Z309 247 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 LHFPL3Q86UP9 236 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 LILRB2Q8N423 598 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 OR2T27Q8NH04 317 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 POC1BQ8TC44 478 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 DNAJA3Q96EY1 480 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 GNRHR2Q96P88 292 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 MNTQ99583 582 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 NAA11Q9BSU3 229 aaPredicted RBP9.03□□□□□ -0.96
SS18-221ENST00000582448 ALG8Q9BVK2 526 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 HCAR1Q9BXC0 346 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 KRTAP4-2Q9BYR5 136 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 SLC6A15Q9H2J7 730 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 RERGLQ9H628 205 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 TMEM185BQ9H7F4 350 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 TRIM36Q9NQ86 728 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 SSR3Q9UNL2 185 aa9.03□□□□□ -0.96
SS18-221ENST00000582448 LSM2Q9Y333 95 aaKnown RBP9.03□□□□□ -0.96
SS18-221ENST00000582448 A0A1W2PPW3 197 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 OR6C68A6NDL8 312 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 CCDC182A6NF36 153 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 EEF1E1-BLOC1S5C9J1V9 151 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 ZNF670-ZNF695F2Z2N8 137 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 EEF1E1O43324 174 aaKnown RBP9.02□□□□□ -0.97
SS18-221ENST00000582448 AHCYL1O43865 530 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 TRAPPC6AO75865 159 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 PLATP00750 562 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 HEXAP06865 529 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 NR4A1P22736 598 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 GADD45AP24522 165 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 GDF1P27539 372 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 CRABP1P29762 137 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 SFTPDP35247 375 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 SOX6P35712 828 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 TGFBR2P37173 567 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 CDKN2AP42771 156 aaKnown RBP9.02□□□□□ -0.97
SS18-221ENST00000582448 LSM3P62310 102 aaKnown RBP9.02□□□□□ -0.97
SS18-221ENST00000582448 POU3F1Q03052 451 aaPredicted RBP9.02□□□□□ -0.97
SS18-221ENST00000582448 GALEQ14376 348 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 GGTLC2Q14390 218 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 DAZAP2Q15038 168 aaPredicted RBP9.02□□□□□ -0.97
SS18-221ENST00000582448 CTF1Q16619 201 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 MESTQ5EB52 335 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 SLC16A12Q6ZSM3 486 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 PXKQ7Z7A4 578 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 UEVLDQ8IX04 471 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 SLC35F2Q8IXU6 374 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 NAXEQ8NCW5 288 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 HAVCR2Q8TDQ0 301 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 SNX33Q8WV41 574 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 ZMYND19Q96E35 227 aaPredicted RBP9.02□□□□□ -0.97
SS18-221ENST00000582448 ARL5BQ96KC2 179 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 OPALINQ96PE5 141 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 TBX5Q99593 518 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 CHCHD6Q9BRQ6 235 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 ALG12Q9BV10 488 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 NMNAT2Q9BZQ4 307 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 ADGRL4Q9HBW9 690 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 EXOSC4Q9NPD3 245 aaKnown RBP9.02□□□□□ -0.97
SS18-221ENST00000582448 TIGARQ9NQ88 270 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 ASB6Q9NWX5 421 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 NDUFB11Q9NX14 153 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 BABAM2Q9NXR7 383 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 STUB1Q9UNE7 303 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 MRPS18CQ9Y3D5 142 aaKnown RBP9.02□□□□□ -0.97
SS18-221ENST00000582448 TMEM14AQ9Y6G1 99 aa9.02□□□□□ -0.97
SS18-221ENST00000582448 A0A1W2PNV4 684 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms