RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 NME4O00746 187 aa11.62□□□□□ -0.55
GGA3-208ENST00000579743 PPIAL4FP0DN26 164 aa11.62□□□□□ -0.55
GGA3-208ENST00000579743 RAC2P15153 192 aa11.62□□□□□ -0.55
GGA3-208ENST00000579743 KITLGP21583 273 aa11.62□□□□□ -0.55
GGA3-208ENST00000579743 CENPAP49450 140 aa11.62□□□□□ -0.55
GGA3-208ENST00000579743 HILS1P60008 231 aa11.62□□□□□ -0.55
GGA3-208ENST00000579743 PSG7Q13046 419 aa11.62□□□□□ -0.55
GGA3-208ENST00000579743 C1orf94Q6P1W5 598 aa11.62□□□□□ -0.55
GGA3-208ENST00000579743 TBPL2Q6SJ96 375 aa11.62□□□□□ -0.55
GGA3-208ENST00000579743 DPY19L2P2Q6ZN68 376 aa11.62□□□□□ -0.55
GGA3-208ENST00000579743 VASH1Q7L8A9 365 aaPredicted RBP11.62□□□□□ -0.55
GGA3-208ENST00000579743 MUC20Q8N307 709 aaPredicted RBP11.62□□□□□ -0.55
GGA3-208ENST00000579743 C3orf56Q8N813 242 aa11.62□□□□□ -0.55
GGA3-208ENST00000579743 FAM216AQ8WUB2 273 aa11.62□□□□□ -0.55
GGA3-208ENST00000579743 RASD2Q96D21 266 aa11.62□□□□□ -0.55
GGA3-208ENST00000579743 HAVCR1Q96D42 359 aa11.62□□□□□ -0.55
GGA3-208ENST00000579743 CMBLQ96DG6 245 aa11.62□□□□□ -0.55
GGA3-208ENST00000579743 ZMYND19Q96E35 227 aaPredicted RBP11.62□□□□□ -0.55
GGA3-208ENST00000579743 FAM46AQ96IP4 442 aaKnown RBP11.62□□□□□ -0.55
GGA3-208ENST00000579743 SPAG4Q9NPE6 437 aa11.62□□□□□ -0.55
GGA3-208ENST00000579743 TMEM106BQ9NUM4 274 aa11.62□□□□□ -0.55
GGA3-208ENST00000579743 ANK3Q12955 4377 aaKnown RBP11.61□□□□□ -0.55
GGA3-208ENST00000579743 CDC42EP2O14613 210 aa11.61□□□□□ -0.55
GGA3-208ENST00000579743 CPT2P23786 658 aa11.61□□□□□ -0.55
GGA3-208ENST00000579743 IFNGR2P38484 337 aa11.61□□□□□ -0.55
GGA3-208ENST00000579743 MDH1P40925 334 aaKnown RBP11.61□□□□□ -0.55
GGA3-208ENST00000579743 LCN2P80188 198 aa11.61□□□□□ -0.55
GGA3-208ENST00000579743 TMEM155Q4W5P6 130 aa11.61□□□□□ -0.55
GGA3-208ENST00000579743 MESTQ5EB52 335 aa11.61□□□□□ -0.55
GGA3-208ENST00000579743 GLYATQ6IB77 296 aa11.61□□□□□ -0.55
GGA3-208ENST00000579743 ZNF771Q7L3S4 317 aaPredicted RBP11.61□□□□□ -0.55
GGA3-208ENST00000579743 JAZF1Q86VZ6 243 aa11.61□□□□□ -0.55
GGA3-208ENST00000579743 ATG16L2Q8NAA4 619 aa11.61□□□□□ -0.55
GGA3-208ENST00000579743 GJC3Q8NFK1 279 aa11.61□□□□□ -0.55
GGA3-208ENST00000579743 SEMA6DQ8NFY4 1073 aa11.61□□□□□ -0.55
GGA3-208ENST00000579743 OR1F12Q8NHA8 337 aa11.61□□□□□ -0.55
GGA3-208ENST00000579743 SLC7A13Q8TCU3 470 aa11.61□□□□□ -0.55
GGA3-208ENST00000579743 APOBEC3DQ96AK3 386 aaPredicted RBP11.61□□□□□ -0.55
GGA3-208ENST00000579743 MCUR1Q96AQ8 359 aa11.61□□□□□ -0.55
GGA3-208ENST00000579743 RSRC1Q96IZ7 334 aaKnown RBP11.61□□□□□ -0.55
GGA3-208ENST00000579743 GPA33Q99795 319 aa11.61□□□□□ -0.55
GGA3-208ENST00000579743 MRI1Q9BV20 369 aa11.61□□□□□ -0.55
GGA3-208ENST00000579743 TMPRSS13Q9BYE2 586 aa11.61□□□□□ -0.55
GGA3-208ENST00000579743 SYT4Q9H2B2 425 aa11.61□□□□□ -0.55
GGA3-208ENST00000579743 NRIP3Q9NQ35 241 aa11.61□□□□□ -0.55
GGA3-208ENST00000579743 DDX28Q9NUL7 540 aaKnown RBP11.61□□□□□ -0.55
GGA3-208ENST00000579743 ADA2Q9NZK5 511 aa11.61□□□□□ -0.55
GGA3-208ENST00000579743 ASH2LQ9UBL3 628 aa11.61□□□□□ -0.55
GGA3-208ENST00000579743 SIGLEC7Q9Y286 467 aa11.61□□□□□ -0.55
GGA3-208ENST00000579743 UNC119BA6NIH7 251 aa11.6□□□□□ -0.55
GGA3-208ENST00000579743 LRRC30A6NM36 301 aa11.6□□□□□ -0.55
GGA3-208ENST00000579743 SOCS2O14508 198 aa11.6□□□□□ -0.55
GGA3-208ENST00000579743 RRP9O43818 475 aaKnown RBP11.6□□□□□ -0.55
GGA3-208ENST00000579743 RGS9O75916 674 aaPredicted RBP11.6□□□□□ -0.55
GGA3-208ENST00000579743 PRSS23O95084 383 aa11.6□□□□□ -0.55
GGA3-208ENST00000579743 RENP00797 406 aa11.6□□□□□ -0.55
GGA3-208ENST00000579743 CTLA4P16410 223 aa11.6□□□□□ -0.55
GGA3-208ENST00000579743 SELEP16581 610 aa11.6□□□□□ -0.55
GGA3-208ENST00000579743 NOS3P29474 1203 aa11.6□□□□□ -0.55
GGA3-208ENST00000579743 MDH2P40926 338 aaKnown RBP11.6□□□□□ -0.55
GGA3-208ENST00000579743 SRP9P49458 86 aaKnown RBP11.6□□□□□ -0.55
GGA3-208ENST00000579743 PSME3P61289 254 aa11.6□□□□□ -0.55
GGA3-208ENST00000579743 FHL1Q13642 323 aa11.6□□□□□ -0.55
GGA3-208ENST00000579743 SLC36A3Q495N2 470 aa11.6□□□□□ -0.55
GGA3-208ENST00000579743 ESCO2Q56NI9 601 aa11.6□□□□□ -0.55
GGA3-208ENST00000579743 ARMCX4Q5H9R4 360 aa11.6□□□□□ -0.55
GGA3-208ENST00000579743 SMARCD3Q6STE5 483 aa11.6□□□□□ -0.55
GGA3-208ENST00000579743 FAM122BQ7Z309 247 aa11.6□□□□□ -0.55
GGA3-208ENST00000579743 OR13G1Q8NGZ3 307 aa11.6□□□□□ -0.55
GGA3-208ENST00000579743 POP5Q969H6 163 aaKnown RBP11.6□□□□□ -0.55
GGA3-208ENST00000579743 ZNF582Q96NG8 517 aaPredicted RBP11.6□□□□□ -0.55
GGA3-208ENST00000579743 CDADC1Q9BWV3 514 aa11.6□□□□□ -0.55
GGA3-208ENST00000579743 HCAR1Q9BXC0 346 aa11.6□□□□□ -0.55
GGA3-208ENST00000579743 NSRP1Q9H0G5 558 aaKnown RBP11.6□□□□□ -0.55
GGA3-208ENST00000579743 HDHD2Q9H0R4 259 aa11.6□□□□□ -0.55
GGA3-208ENST00000579743 FAM53CQ9NYF3 392 aa11.6□□□□□ -0.55
GGA3-208ENST00000579743 VSX1Q9NZR4 365 aaPredicted RBP11.6□□□□□ -0.55
GGA3-208ENST00000579743 COA3Q9Y2R0 106 aaPredicted RBP11.6□□□□□ -0.55
GGA3-208ENST00000579743 STARD10Q9Y365 291 aa11.6□□□□□ -0.55
GGA3-208ENST00000579743 IER3IP1Q9Y5U9 82 aa11.6□□□□□ -0.55
GGA3-208ENST00000579743 IMPA2O14732 288 aa11.59□□□□□ -0.55
GGA3-208ENST00000579743 ATP8B1O43520 1251 aa11.59□□□□□ -0.55
GGA3-208ENST00000579743 PTP4A3O75365 173 aa11.59□□□□□ -0.55
GGA3-208ENST00000579743 IGHV2-70P01814 119 aa11.59□□□□□ -0.55
GGA3-208ENST00000579743 NCK1P16333 377 aa11.59□□□□□ -0.55
GGA3-208ENST00000579743 PRDX6P30041 224 aa11.59□□□□□ -0.55
GGA3-208ENST00000579743 SLC6A6P31641 620 aa11.59□□□□□ -0.55
GGA3-208ENST00000579743 BTG1P62324 171 aa11.59□□□□□ -0.55
GGA3-208ENST00000579743 LRRC28Q86X40 367 aaPredicted RBP11.59□□□□□ -0.55
GGA3-208ENST00000579743 C1orf87Q8N0U7 546 aa11.59□□□□□ -0.55
GGA3-208ENST00000579743 ZNF283Q8N7M2 679 aa11.59□□□□□ -0.55
GGA3-208ENST00000579743 OR2AJ1Q8NGZ0 328 aa11.59□□□□□ -0.55
GGA3-208ENST00000579743 GPX7Q96SL4 187 aaPredicted RBP11.59□□□□□ -0.55
GGA3-208ENST00000579743 NUAK2Q9H093 628 aa11.59□□□□□ -0.55
GGA3-208ENST00000579743 PATZ1Q9HBE1 687 aaKnown RBP11.59□□□□□ -0.55
GGA3-208ENST00000579743 DCAF13Q9NV06 445 aaKnown RBP11.59□□□□□ -0.55
GGA3-208ENST00000579743 NDUFAF4Q9P032 175 aa11.59□□□□□ -0.55
GGA3-208ENST00000579743 OR5V1Q9UGF6 321 aa11.59□□□□□ -0.55
GGA3-208ENST00000579743 EGFL7Q9UHF1 273 aa11.59□□□□□ -0.55
GGA3-208ENST00000579743 TMCC3Q9ULS5 477 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms