RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 FCGR2CP31995 323 aa9.43□□□□□ -0.9
PTPRM-205ENST00000577827 RPS18P62269 152 aaKnown RBP9.43□□□□□ -0.9
PTPRM-205ENST00000577827 RPP30P78346 268 aaKnown RBP9.43□□□□□ -0.9
PTPRM-205ENST00000577827 EEF1A2Q05639 463 aaKnown RBP9.43□□□□□ -0.9
PTPRM-205ENST00000577827 RUNX2Q13950 521 aa9.43□□□□□ -0.9
PTPRM-205ENST00000577827 TOMM34Q15785 309 aaPredicted RBP9.43□□□□□ -0.9
PTPRM-205ENST00000577827 TRILQ7L0X0 811 aa9.43□□□□□ -0.9
PTPRM-205ENST00000577827 OR2W3Q7Z3T1 314 aa9.43□□□□□ -0.9
PTPRM-205ENST00000577827 ABI3BPQ7Z7G0 1075 aa9.43□□□□□ -0.9
PTPRM-205ENST00000577827 NAA40Q86UY6 237 aa9.43□□□□□ -0.9
PTPRM-205ENST00000577827 SGK3Q96BR1 496 aa9.43□□□□□ -0.9
PTPRM-205ENST00000577827 GNPNAT1Q96EK6 184 aaPredicted RBP9.43□□□□□ -0.9
PTPRM-205ENST00000577827 LURAP1Q96LR2 239 aa9.43□□□□□ -0.9
PTPRM-205ENST00000577827 OR8B4Q96RC9 309 aa9.43□□□□□ -0.9
PTPRM-205ENST00000577827 ZCCHC4Q9H5U6 513 aa9.43□□□□□ -0.9
PTPRM-205ENST00000577827 SPACA1Q9HBV2 294 aa9.43□□□□□ -0.9
PTPRM-205ENST00000577827 LRIT1Q9P2V4 623 aa9.43□□□□□ -0.9
PTPRM-205ENST00000577827 HS3ST3A1Q9Y663 406 aa9.43□□□□□ -0.9
PTPRM-205ENST00000577827 PRRT4C9JH25 899 aa9.43□□□□□ -0.9
PTPRM-205ENST00000577827 OR2C1O95371 312 aa9.43□□□□□ -0.9
PTPRM-205ENST00000577827 APOBEC1P41238 236 aaKnown RBP9.43□□□□□ -0.9
PTPRM-205ENST00000577827 DHPSP49366 369 aaPredicted RBP9.43□□□□□ -0.9
PTPRM-205ENST00000577827 PJVKQ0ZLH3 352 aa9.43□□□□□ -0.9
PTPRM-205ENST00000577827 SMUG1Q53HV7 270 aa9.43□□□□□ -0.9
PTPRM-205ENST00000577827 TMPPEQ6ZT21 453 aa9.43□□□□□ -0.9
PTPRM-205ENST00000577827 ZNF485Q8NCK3 441 aa9.43□□□□□ -0.9
PTPRM-205ENST00000577827 BADQ92934 168 aa9.43□□□□□ -0.9
PTPRM-205ENST00000577827 OCSTAMPQ9BR26 566 aa9.43□□□□□ -0.9
PTPRM-205ENST00000577827 LDAHQ9H6V9 325 aa9.43□□□□□ -0.9
PTPRM-205ENST00000577827 RHOFQ9HBH0 211 aa9.43□□□□□ -0.9
PTPRM-205ENST00000577827 CD37P11049 281 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 HRH1P35367 487 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 EIF1P41567 113 aaKnown RBP9.42□□□□□ -0.9
PTPRM-205ENST00000577827 ZNF136P52737 540 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 PNLIPRP3Q17RR3 467 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 PLCXD3Q63HM9 321 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 C1orf87Q8N0U7 546 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 CLEC1AQ8NC01 280 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 GJC3Q8NFK1 279 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 NANOS1Q8WY41 292 aaKnown RBP9.42□□□□□ -0.9
PTPRM-205ENST00000577827 TSSK2Q96PF2 358 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 NXF5Q9H1B4 397 aaKnown RBP9.42□□□□□ -0.9
PTPRM-205ENST00000577827 TLCD2A6NGC4 264 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 RNF212BA8MTL3 300 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 PRAMEF4O60810 478 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 OR7C1O76099 320 aaPredicted RBP9.42□□□□□ -0.9
PTPRM-205ENST00000577827 HLA-DQB1P01920 261 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 CXCL10P02778 98 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 MT-ND4LP03901 98 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 ADRA2CP18825 462 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 LAP3P28838 519 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 RBM39Q14498 530 aaKnown RBP9.42□□□□□ -0.9
PTPRM-205ENST00000577827 TMEM71Q6P5X7 295 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 OGFOD3Q6PK18 319 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 OR51A4Q8NGJ6 313 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 OR5M9Q8NGP3 310 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 OTOSQ8NHW6 89 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 SLC25A43Q8WUT9 341 aaPredicted RBP9.42□□□□□ -0.9
PTPRM-205ENST00000577827 ZNF681Q96N22 645 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.42□□□□□ -0.9
PTPRM-205ENST00000577827 TTLL8A6PVC2 850 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 PPM1DO15297 605 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 PTAFRP25105 342 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 SELENOPP49908 381 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 KLF9Q13886 244 aaPredicted RBP9.42□□□□□ -0.9
PTPRM-205ENST00000577827 ZNF770Q6IQ21 691 aaPredicted RBP9.42□□□□□ -0.9
PTPRM-205ENST00000577827 MRPL41Q8IXM3 137 aaKnown RBP9.42□□□□□ -0.9
PTPRM-205ENST00000577827 DEFB119Q8N690 84 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 BPIFCQ8NFQ6 507 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 NUDCD2Q8WVJ2 157 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 ORAI1Q96D31 301 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 SGCZQ96LD1 299 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 LINC00052Q96N35 136 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 ABHD6Q9BV23 337 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 SLC6A17Q9H1V8 727 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 GHITMQ9H3K2 345 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 C20orf141Q9NUB4 165 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 ALKBH4Q9NXW9 302 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 SLCO1C1Q9NYB5 712 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 KCNG2Q9UJ96 466 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 PADI1Q9ULC6 663 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 NINQ8N4C6 2090 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 LRRC37AA6NMS7 1700 aa9.42□□□□□ -0.9
PTPRM-205ENST00000577827 A0A087WZY1 265 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 PHF1O43189 567 aaPredicted RBP9.41□□□□□ -0.9
PTPRM-205ENST00000577827 EIF1BO60739 113 aaKnown RBP9.41□□□□□ -0.9
PTPRM-205ENST00000577827 H2AFB1P0C5Y9 115 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 FOLR1P15328 257 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 DHRS2Q13268 280 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 ASTLQ6HA08 431 aaPredicted RBP9.41□□□□□ -0.9
PTPRM-205ENST00000577827 SLC38A6Q8IZM9 456 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 OR5T1Q8NG75 326 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 MARCH1Q8TCQ1 289 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 RSC1A1Q92681 617 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 NUDT22Q9BRQ3 303 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 SLC22A13Q9Y226 551 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 LRP5LA4QPB2 252 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 TRAPPC2LH3BP13 241 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 ERVH48-1M5A8F1 160 aa9.41□□□□□ -0.9
PTPRM-205ENST00000577827 EMDP50402 254 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms