RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 RFPL4BQ6ZWI9 263 aa16.57■□□□□ 0.24
SS18-208ENST00000577751 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.57■□□□□ 0.24
SS18-208ENST00000577751 AMIGO2Q86SJ2 522 aa16.57■□□□□ 0.24
SS18-208ENST00000577751 ZCCHC24Q8N2G6 241 aaKnown RBP16.57■□□□□ 0.24
SS18-208ENST00000577751 PROKR2Q8NFJ6 384 aa16.57■□□□□ 0.24
SS18-208ENST00000577751 OR51L1Q8NGJ5 315 aa16.57■□□□□ 0.24
SS18-208ENST00000577751 OR9Q1Q8NGQ5 310 aa16.57■□□□□ 0.24
SS18-208ENST00000577751 NEU4Q8WWR8 484 aaPredicted RBP16.57■□□□□ 0.24
SS18-208ENST00000577751 PTP4A1Q93096 173 aa16.57■□□□□ 0.24
SS18-208ENST00000577751 MARS2Q96GW9 593 aaKnown RBP16.57■□□□□ 0.24
SS18-208ENST00000577751 MS4A5Q9H3V2 200 aa16.57■□□□□ 0.24
SS18-208ENST00000577751 ELOVL3Q9HB03 270 aa16.57■□□□□ 0.24
SS18-208ENST00000577751 PAPOLBQ9NRJ5 636 aaKnown RBP16.57■□□□□ 0.24
SS18-208ENST00000577751 TBCCD1Q9NVR7 557 aa16.57■□□□□ 0.24
SS18-208ENST00000577751 KCNG2Q9UJ96 466 aa16.57■□□□□ 0.24
SS18-208ENST00000577751 POLR1DQ9Y2S0 133 aa16.57■□□□□ 0.24
SS18-208ENST00000577751 CLPTM1O96005 669 aa16.56■□□□□ 0.24
SS18-208ENST00000577751 GYPBP06028 91 aa16.56■□□□□ 0.24
SS18-208ENST00000577751 ADRA2AP08913 450 aa16.56■□□□□ 0.24
SS18-208ENST00000577751 CLUP10909 449 aa16.56■□□□□ 0.24
SS18-208ENST00000577751 KLF3P57682 345 aaPredicted RBP16.56■□□□□ 0.24
SS18-208ENST00000577751 KPNB1Q14974 876 aaKnown RBP16.56■□□□□ 0.24
SS18-208ENST00000577751 ELFN2Q5R3F8 820 aa16.56■□□□□ 0.24
SS18-208ENST00000577751 LINC01590Q5TEZ4 76 aa16.56■□□□□ 0.24
SS18-208ENST00000577751 ARL9Q6T311 187 aa16.56■□□□□ 0.24
SS18-208ENST00000577751 ZDHHC13Q8IUH4 622 aa16.56■□□□□ 0.24
SS18-208ENST00000577751 ZNF525Q8N782 197 aa16.56■□□□□ 0.24
SS18-208ENST00000577751 ABHD4Q8TB40 342 aa16.56■□□□□ 0.24
SS18-208ENST00000577751 SLC25A40Q8TBP6 338 aa16.56■□□□□ 0.24
SS18-208ENST00000577751 SLC7A6Q92536 515 aa16.56■□□□□ 0.24
SS18-208ENST00000577751 COQ7Q99807 217 aa16.56■□□□□ 0.24
SS18-208ENST00000577751 CDADC1Q9BWV3 514 aa16.56■□□□□ 0.24
SS18-208ENST00000577751 HCAR1Q9BXC0 346 aa16.56■□□□□ 0.24
SS18-208ENST00000577751 HDHD2Q9H0R4 259 aa16.56■□□□□ 0.24
SS18-208ENST00000577751 GABARAPL1Q9H0R8 117 aa16.56■□□□□ 0.24
SS18-208ENST00000577751 SLC25A19Q9HC21 320 aa16.56■□□□□ 0.24
SS18-208ENST00000577751 DYNLRB1Q9NP97 96 aa16.56■□□□□ 0.24
SS18-208ENST00000577751 FAM183AA6NL82 134 aa16.55■□□□□ 0.24
SS18-208ENST00000577751 SURF4O15260 269 aa16.55■□□□□ 0.24
SS18-208ENST00000577751 IGHV3-13P01766 116 aa16.55■□□□□ 0.24
SS18-208ENST00000577751 HMGN1P05114 100 aa16.55■□□□□ 0.24
SS18-208ENST00000577751 ZNF823P16415 610 aa16.55■□□□□ 0.24
SS18-208ENST00000577751 TUBG1P23258 451 aa16.55■□□□□ 0.24
SS18-208ENST00000577751 ALDH3B1P43353 468 aa16.55■□□□□ 0.24
SS18-208ENST00000577751 CRISP1P54107 249 aa16.55■□□□□ 0.24
SS18-208ENST00000577751 SELENOVP59797 346 aa16.55■□□□□ 0.24
SS18-208ENST00000577751 PPP1CBP62140 327 aa16.55■□□□□ 0.24
SS18-208ENST00000577751 MAD2L1BPQ15013 274 aaPredicted RBP16.55■□□□□ 0.24
SS18-208ENST00000577751 PCK2Q16822 640 aa16.55■□□□□ 0.24
SS18-208ENST00000577751 RSPO1Q2MKA7 263 aaPredicted RBP16.55■□□□□ 0.24
SS18-208ENST00000577751 KRTAP27-1Q3LI81 207 aa16.55■□□□□ 0.24
SS18-208ENST00000577751 ZNF718Q3SXZ3 478 aa16.55■□□□□ 0.24
SS18-208ENST00000577751 MBNL2Q5VZF2 373 aaKnown RBP16.55■□□□□ 0.24
SS18-208ENST00000577751 CLEC2AQ6UVW9 174 aa16.55■□□□□ 0.24
SS18-208ENST00000577751 LYPD4Q6UWN0 246 aa16.55■□□□□ 0.24
SS18-208ENST00000577751 CFAP77Q6ZQR2 320 aa16.55■□□□□ 0.24
SS18-208ENST00000577751 LINC00346Q8IVM7 164 aa16.55■□□□□ 0.24
SS18-208ENST00000577751 KLF14Q8TD94 323 aaPredicted RBP16.55■□□□□ 0.24
SS18-208ENST00000577751 PYDC1Q8WXC3 89 aa16.55■□□□□ 0.24
SS18-208ENST00000577751 CENPNQ96H22 339 aaPredicted RBP16.55■□□□□ 0.24
SS18-208ENST00000577751 DCLRE1CQ96SD1 692 aaKnown RBP16.55■□□□□ 0.24
SS18-208ENST00000577751 RHNO1Q9BSD3 238 aa16.55■□□□□ 0.24
SS18-208ENST00000577751 OR2J1Q9GZK6 312 aa16.55■□□□□ 0.24
SS18-208ENST00000577751 PNRC2Q9NPJ4 139 aaKnown RBP16.55■□□□□ 0.24
SS18-208ENST00000577751 TUBG2Q9NRH3 451 aa16.55■□□□□ 0.24
SS18-208ENST00000577751 SLCO1C1Q9NYB5 712 aa16.55■□□□□ 0.24
SS18-208ENST00000577751 KIF17Q9P2E2 1029 aa16.55■□□□□ 0.24
SS18-208ENST00000577751 COMMD3-BMI1R4GMX3 469 aa16.55■□□□□ 0.24
SS18-208ENST00000577751 IGHV4-30-2A0A087WSY4 118 aa16.54■□□□□ 0.24
SS18-208ENST00000577751 TVP23AA6NH52 213 aa16.54■□□□□ 0.24
SS18-208ENST00000577751 H3BSA7 217 aa16.54■□□□□ 0.24
SS18-208ENST00000577751 ABHD16AO95870 558 aa16.54■□□□□ 0.24
SS18-208ENST00000577751 DBHP09172 617 aa16.54■□□□□ 0.24
SS18-208ENST00000577751 CSF3P09919 207 aa16.54■□□□□ 0.24
SS18-208ENST00000577751 ZNF23P17027 643 aa16.54■□□□□ 0.24
SS18-208ENST00000577751 FMO3P31513 532 aa16.54■□□□□ 0.24
SS18-208ENST00000577751 BLVRAP53004 296 aa16.54■□□□□ 0.24
SS18-208ENST00000577751 ESRRGP62508 458 aa16.54■□□□□ 0.24
SS18-208ENST00000577751 TMEM255AQ5JRV8 349 aa16.54■□□□□ 0.24
SS18-208ENST00000577751 TEX30Q5JUR7 227 aa16.54■□□□□ 0.24
SS18-208ENST00000577751 TMEM236Q5W0B7 351 aa16.54■□□□□ 0.24
SS18-208ENST00000577751 KDM4DQ6B0I6 523 aa16.54■□□□□ 0.24
SS18-208ENST00000577751 BIVMQ86UB2 503 aa16.54■□□□□ 0.24
SS18-208ENST00000577751 ZNF511Q8NB15 262 aa16.54■□□□□ 0.24
SS18-208ENST00000577751 ICA1LQ8NDH6 482 aa16.54■□□□□ 0.24
SS18-208ENST00000577751 OR2AJ1Q8NGZ0 328 aa16.54■□□□□ 0.24
SS18-208ENST00000577751 MAP6Q96JE9 813 aa16.54■□□□□ 0.24
SS18-208ENST00000577751 REG4Q9BYZ8 158 aa16.54■□□□□ 0.24
SS18-208ENST00000577751 MED20Q9H944 212 aa16.54■□□□□ 0.24
SS18-208ENST00000577751 WDR76Q9H967 626 aa16.54■□□□□ 0.24
SS18-208ENST00000577751 MYOZ1Q9NP98 299 aaPredicted RBP16.54■□□□□ 0.24
SS18-208ENST00000577751 TAAR3PQ9P1P4 343 aa16.54■□□□□ 0.24
SS18-208ENST00000577751 GRIP1Q9Y3R0 1128 aa16.54■□□□□ 0.24
SS18-208ENST00000577751 A0A1W2PPW3 197 aa16.53■□□□□ 0.24
SS18-208ENST00000577751 RNF223E7ERA6 249 aa16.53■□□□□ 0.24
SS18-208ENST00000577751 H3BNX3 289 aa16.53■□□□□ 0.24
SS18-208ENST00000577751 J3QW42 95 aa16.53■□□□□ 0.24
SS18-208ENST00000577751 ERCC1P07992 297 aaPredicted RBP16.53■□□□□ 0.24
SS18-208ENST00000577751 PSKH1P11801 424 aa16.53■□□□□ 0.24
SS18-208ENST00000577751 MPV17P39210 176 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms