RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 CCL2P13500 99 aa12.11□□□□□ -0.47
RPAIN-217ENST00000575711 ZNF35P13682 527 aa12.11□□□□□ -0.47
RPAIN-217ENST00000575711 HSPA13P48723 471 aa12.11□□□□□ -0.47
RPAIN-217ENST00000575711 POU4F2Q12837 409 aa12.11□□□□□ -0.47
RPAIN-217ENST00000575711 EIF2B1Q14232 305 aaKnown RBP12.11□□□□□ -0.47
RPAIN-217ENST00000575711 MAD2L1BPQ15013 274 aaPredicted RBP12.11□□□□□ -0.47
RPAIN-217ENST00000575711 ZNF672Q499Z4 452 aaPredicted RBP12.11□□□□□ -0.47
RPAIN-217ENST00000575711 IZUMO2Q6UXV1 221 aa12.11□□□□□ -0.47
RPAIN-217ENST00000575711 C8orf59Q8N0T1 100 aaPredicted RBP12.11□□□□□ -0.47
RPAIN-217ENST00000575711 ZNF454Q8N9F8 522 aa12.11□□□□□ -0.47
RPAIN-217ENST00000575711 RHOXF1Q8NHV9 184 aa12.11□□□□□ -0.47
RPAIN-217ENST00000575711 AKAP1Q92667 903 aaKnown RBP eCLIP12.11□□□□□ -0.47
RPAIN-217ENST00000575711 TFAP2CQ92754 450 aa12.11□□□□□ -0.47
RPAIN-217ENST00000575711 MAP6Q96JE9 813 aa12.11□□□□□ -0.47
RPAIN-217ENST00000575711 POM121L2Q96KW2 1035 aa12.11□□□□□ -0.47
RPAIN-217ENST00000575711 COQ7Q99807 217 aa12.11□□□□□ -0.47
RPAIN-217ENST00000575711 ATF6BQ99941 703 aa12.11□□□□□ -0.47
RPAIN-217ENST00000575711 YIPF3Q9GZM5 350 aa12.11□□□□□ -0.47
RPAIN-217ENST00000575711 AASSQ9UDR5 926 aa12.11□□□□□ -0.47
RPAIN-217ENST00000575711 PTPN13Q12923 2485 aa12.11□□□□□ -0.47
RPAIN-217ENST00000575711 PKDREJQ9NTG1 2253 aa12.11□□□□□ -0.47
RPAIN-217ENST00000575711 BAHCC1Q9P281 2608 aa12.1□□□□□ -0.47
RPAIN-217ENST00000575711 LOC100509620A0A075B734 347 aa12.1□□□□□ -0.47
RPAIN-217ENST00000575711 A0A1W2PPR1 153 aa12.1□□□□□ -0.47
RPAIN-217ENST00000575711 OR6C6A6NF89 314 aa12.1□□□□□ -0.47
RPAIN-217ENST00000575711 LYNP07948 512 aa12.1□□□□□ -0.47
RPAIN-217ENST00000575711 ATP6V1E1P36543 226 aa12.1□□□□□ -0.47
RPAIN-217ENST00000575711 ECH1Q13011 328 aa12.1□□□□□ -0.47
RPAIN-217ENST00000575711 C6orf52Q5T4I8 152 aa12.1□□□□□ -0.47
RPAIN-217ENST00000575711 KRT80Q6KB66 452 aa12.1□□□□□ -0.47
RPAIN-217ENST00000575711 UNQ6126/PRO20091Q6UXV3 157 aa12.1□□□□□ -0.47
RPAIN-217ENST00000575711 OR51G2Q8NGK0 314 aa12.1□□□□□ -0.47
RPAIN-217ENST00000575711 OTOSQ8NHW6 89 aa12.1□□□□□ -0.47
RPAIN-217ENST00000575711 THEM6Q8WUY1 208 aa12.1□□□□□ -0.47
RPAIN-217ENST00000575711 NEUROG1Q92886 237 aa12.1□□□□□ -0.47
RPAIN-217ENST00000575711 SLAMF6Q96DU3 332 aa12.1□□□□□ -0.47
RPAIN-217ENST00000575711 UBTD1Q9HAC8 227 aa12.1□□□□□ -0.47
RPAIN-217ENST00000575711 ADGRL4Q9HBW9 690 aa12.1□□□□□ -0.47
RPAIN-217ENST00000575711 PNRC2Q9NPJ4 139 aaKnown RBP12.1□□□□□ -0.47
RPAIN-217ENST00000575711 CISD1Q9NZ45 108 aaKnown RBP12.1□□□□□ -0.47
RPAIN-217ENST00000575711 EIF3KQ9UBQ5 218 aaKnown RBP12.1□□□□□ -0.47
RPAIN-217ENST00000575711 LAMP5Q9UJQ1 280 aa12.1□□□□□ -0.47
RPAIN-217ENST00000575711 TMEM14AQ9Y6G1 99 aa12.1□□□□□ -0.47
RPAIN-217ENST00000575711 HSPE1-MOB4S4R3N1 261 aa12.1□□□□□ -0.47
RPAIN-217ENST00000575711 ZNF878C9JN71 531 aa12.09□□□□□ -0.47
RPAIN-217ENST00000575711 HS3ST1O14792 307 aa12.09□□□□□ -0.47
RPAIN-217ENST00000575711 SBK2P0C263 348 aa12.09□□□□□ -0.47
RPAIN-217ENST00000575711 NR4A1P22736 598 aa12.09□□□□□ -0.47
RPAIN-217ENST00000575711 PCSK6P29122 969 aa12.09□□□□□ -0.47
RPAIN-217ENST00000575711 MTNR1AP48039 350 aa12.09□□□□□ -0.47
RPAIN-217ENST00000575711 NUDT6P53370 316 aa12.09□□□□□ -0.47
RPAIN-217ENST00000575711 HGFACQ04756 655 aa12.09□□□□□ -0.47
RPAIN-217ENST00000575711 SNTB2Q13425 540 aaKnown RBP12.09□□□□□ -0.47
RPAIN-217ENST00000575711 TAF13Q15543 124 aa12.09□□□□□ -0.47
RPAIN-217ENST00000575711 SNCBQ16143 134 aa12.09□□□□□ -0.47
RPAIN-217ENST00000575711 ARL9Q6T311 187 aa12.09□□□□□ -0.47
RPAIN-217ENST00000575711 SLC35F2Q8IXU6 374 aa12.09□□□□□ -0.47
RPAIN-217ENST00000575711 PAQR4Q8N4S7 273 aaPredicted RBP12.09□□□□□ -0.47
RPAIN-217ENST00000575711 NUP37Q8NFH4 326 aa12.09□□□□□ -0.47
RPAIN-217ENST00000575711 LILRB1Q8NHL6 650 aaPredicted RBP12.09□□□□□ -0.47
RPAIN-217ENST00000575711 ST7LQ8TDW4 575 aa12.09□□□□□ -0.47
RPAIN-217ENST00000575711 SMAP2Q8WU79 429 aaPredicted RBP12.09□□□□□ -0.47
RPAIN-217ENST00000575711 APH1BQ8WW43 257 aa12.09□□□□□ -0.47
RPAIN-217ENST00000575711 FBXW5Q969U6 566 aa12.09□□□□□ -0.47
RPAIN-217ENST00000575711 DCLRE1CQ96SD1 692 aaKnown RBP12.09□□□□□ -0.47
RPAIN-217ENST00000575711 MNTQ99583 582 aa12.09□□□□□ -0.47
RPAIN-217ENST00000575711 COPS4Q9BT78 406 aa12.09□□□□□ -0.47
RPAIN-217ENST00000575711 ABHD6Q9BV23 337 aa12.09□□□□□ -0.47
RPAIN-217ENST00000575711 RASSF4Q9H2L5 321 aa12.09□□□□□ -0.47
RPAIN-217ENST00000575711 PLEKHF2Q9H8W4 249 aa12.09□□□□□ -0.47
RPAIN-217ENST00000575711 CENPMQ9NSP4 180 aa12.09□□□□□ -0.47
RPAIN-217ENST00000575711 DDX28Q9NUL7 540 aaKnown RBP12.09□□□□□ -0.47
RPAIN-217ENST00000575711 PRR14LQ5THK1 2151 aa12.09□□□□□ -0.47
RPAIN-217ENST00000575711 VSTM5A8MXK1 200 aa12.08□□□□□ -0.48
RPAIN-217ENST00000575711 E7EQL1 145 aa12.08□□□□□ -0.48
RPAIN-217ENST00000575711 PHYHO14832 338 aa12.08□□□□□ -0.48
RPAIN-217ENST00000575711 ABHD16AO95870 558 aa12.08□□□□□ -0.48
RPAIN-217ENST00000575711 DBHP09172 617 aa12.08□□□□□ -0.48
RPAIN-217ENST00000575711 GNAO1P09471 354 aa12.08□□□□□ -0.48
RPAIN-217ENST00000575711 FAM157BP0CG42 384 aa12.08□□□□□ -0.48
RPAIN-217ENST00000575711 DBTP11182 482 aaKnown RBP12.08□□□□□ -0.48
RPAIN-217ENST00000575711 RAD52P43351 418 aa12.08□□□□□ -0.48
RPAIN-217ENST00000575711 SLC15A1P46059 708 aa12.08□□□□□ -0.48
RPAIN-217ENST00000575711 HCCSP53701 268 aa12.08□□□□□ -0.48
RPAIN-217ENST00000575711 ISL1P61371 349 aa12.08□□□□□ -0.48
RPAIN-217ENST00000575711 RPS23P62266 143 aaKnown RBP12.08□□□□□ -0.48
RPAIN-217ENST00000575711 VHLLQ6RSH7 139 aa12.08□□□□□ -0.48
RPAIN-217ENST00000575711 USP51Q70EK9 711 aa12.08□□□□□ -0.48
RPAIN-217ENST00000575711 SPATC1Q76KD6 591 aa12.08□□□□□ -0.48
RPAIN-217ENST00000575711 THAP5Q7Z6K1 395 aa12.08□□□□□ -0.48
RPAIN-217ENST00000575711 OR10S1Q8NGN2 331 aa12.08□□□□□ -0.48
RPAIN-217ENST00000575711 CNIH3Q8TBE1 160 aa12.08□□□□□ -0.48
RPAIN-217ENST00000575711 IPCEF1Q8WWN9 437 aaPredicted RBP12.08□□□□□ -0.48
RPAIN-217ENST00000575711 SLC7A6Q92536 515 aa12.08□□□□□ -0.48
RPAIN-217ENST00000575711 SPTSSAQ969W0 71 aa12.08□□□□□ -0.48
RPAIN-217ENST00000575711 RNFT2Q96EX2 444 aa12.08□□□□□ -0.48
RPAIN-217ENST00000575711 C4orf45Q96LM5 186 aa12.08□□□□□ -0.48
RPAIN-217ENST00000575711 BCL2L14Q9BZR8 327 aa12.08□□□□□ -0.48
RPAIN-217ENST00000575711 OR51B6Q9H340 312 aa12.08□□□□□ -0.48
RPAIN-217ENST00000575711 ELOVL3Q9HB03 270 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms