RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 WIPF3A6NGB9 483 aa12.96□□□□□ -0.33
SMG6-215ENST00000574501 GPR37O15354 613 aa12.96□□□□□ -0.33
SMG6-215ENST00000574501 OIP5O43482 229 aa12.96□□□□□ -0.33
SMG6-215ENST00000574501 YIF1AO95070 293 aa12.96□□□□□ -0.33
SMG6-215ENST00000574501 PNPP00491 289 aa12.96□□□□□ -0.33
SMG6-215ENST00000574501 P2RY2P41231 377 aa12.96□□□□□ -0.33
SMG6-215ENST00000574501 HTR5AP47898 357 aa12.96□□□□□ -0.33
SMG6-215ENST00000574501 ARRB1P49407 418 aaPredicted RBP12.96□□□□□ -0.33
SMG6-215ENST00000574501 CSNK1EP49674 416 aaKnown RBP12.96□□□□□ -0.33
SMG6-215ENST00000574501 PRPS1P60891 318 aa12.96□□□□□ -0.33
SMG6-215ENST00000574501 SSTP61278 116 aa12.96□□□□□ -0.33
SMG6-215ENST00000574501 SKP2Q13309 424 aa12.96□□□□□ -0.33
SMG6-215ENST00000574501 CLINT1Q14677 625 aa12.96□□□□□ -0.33
SMG6-215ENST00000574501 NNATQ16517 81 aa12.96□□□□□ -0.33
SMG6-215ENST00000574501 MEP1BQ16820 701 aa12.96□□□□□ -0.33
SMG6-215ENST00000574501 PRICKLE4Q2TBC4 344 aa12.96□□□□□ -0.33
SMG6-215ENST00000574501 ITPRIPL2Q3MIP1 535 aa12.96□□□□□ -0.33
SMG6-215ENST00000574501 FCRL6Q6DN72 434 aa12.96□□□□□ -0.33
SMG6-215ENST00000574501 DGAT2L6Q6ZPD8 337 aa12.96□□□□□ -0.33
SMG6-215ENST00000574501 FRMD1Q8N878 549 aa12.96□□□□□ -0.33
SMG6-215ENST00000574501 CHST4Q8NCG5 386 aa12.96□□□□□ -0.33
SMG6-215ENST00000574501 OR52R1Q8NGF1 315 aa12.96□□□□□ -0.33
SMG6-215ENST00000574501 OR5T3Q8NGG3 340 aa12.96□□□□□ -0.33
SMG6-215ENST00000574501 OR51F2Q8NH61 342 aa12.96□□□□□ -0.33
SMG6-215ENST00000574501 MARCH1Q8TCQ1 289 aa12.96□□□□□ -0.33
SMG6-215ENST00000574501 ZNF775Q96BV0 537 aaPredicted RBP12.96□□□□□ -0.33
SMG6-215ENST00000574501 MOGAT1Q96PD6 335 aa12.96□□□□□ -0.33
SMG6-215ENST00000574501 NMES1Q9C002 83 aa12.96□□□□□ -0.33
SMG6-215ENST00000574501 DHDHQ9UQ10 334 aa12.96□□□□□ -0.33
SMG6-215ENST00000574501 DBX1A6NMT0 343 aa12.96□□□□□ -0.34
SMG6-215ENST00000574501 B3GALT2O43825 422 aa12.96□□□□□ -0.34
SMG6-215ENST00000574501 PLGP00747 810 aaPredicted RBP12.96□□□□□ -0.34
SMG6-215ENST00000574501 CFPP27918 469 aa12.96□□□□□ -0.34
SMG6-215ENST00000574501 GLP1RP43220 463 aa12.96□□□□□ -0.34
SMG6-215ENST00000574501 GSK3AP49840 483 aa12.96□□□□□ -0.34
SMG6-215ENST00000574501 RPS4XP62701 263 aaKnown RBP12.96□□□□□ -0.34
SMG6-215ENST00000574501 TMEM52BQ4KMG9 183 aa12.96□□□□□ -0.34
SMG6-215ENST00000574501 ALG10Q5BKT4 473 aa12.96□□□□□ -0.34
SMG6-215ENST00000574501 FIP1L1Q6UN15 594 aaKnown RBP12.96□□□□□ -0.34
SMG6-215ENST00000574501 ZDHHC22Q8N966 263 aa12.96□□□□□ -0.34
SMG6-215ENST00000574501 RCBTB1Q8NDN9 531 aa12.96□□□□□ -0.34
SMG6-215ENST00000574501 RNF128Q8TEB7 428 aa12.96□□□□□ -0.34
SMG6-215ENST00000574501 ELF4Q99607 663 aaPredicted RBP12.96□□□□□ -0.34
SMG6-215ENST00000574501 TOLLIPQ9H0E2 274 aa12.96□□□□□ -0.34
SMG6-215ENST00000574501 TAF9BQ9HBM6 251 aa12.96□□□□□ -0.34
SMG6-215ENST00000574501 PLA2G2EQ9NZK7 142 aa12.96□□□□□ -0.34
SMG6-215ENST00000574501 A0A1B0GV90 55 aa12.95□□□□□ -0.34
SMG6-215ENST00000574501 NPIPB9F8W1W9 429 aa12.95□□□□□ -0.34
SMG6-215ENST00000574501 PHYHO14832 338 aa12.95□□□□□ -0.34
SMG6-215ENST00000574501 PMP2P02689 132 aa12.95□□□□□ -0.34
SMG6-215ENST00000574501 CISD3P0C7P0 127 aa12.95□□□□□ -0.34
SMG6-215ENST00000574501 SLC35G6P0C7Q6 338 aa12.95□□□□□ -0.34
SMG6-215ENST00000574501 GRK6P43250 576 aa12.95□□□□□ -0.34
SMG6-215ENST00000574501 SLC25A1P53007 311 aa12.95□□□□□ -0.34
SMG6-215ENST00000574501 DVL1P1P54792 670 aaPredicted RBP12.95□□□□□ -0.34
SMG6-215ENST00000574501 SLC9A3R2Q15599 337 aa12.95□□□□□ -0.34
SMG6-215ENST00000574501 Q3ZCU0 254 aa12.95□□□□□ -0.34
SMG6-215ENST00000574501 BTNL8Q6UX41 500 aa12.95□□□□□ -0.34
SMG6-215ENST00000574501 ADGRE4PQ86SQ3 457 aa12.95□□□□□ -0.34
SMG6-215ENST00000574501 RTN4RL2Q86UN3 420 aa12.95□□□□□ -0.34
SMG6-215ENST00000574501 FOXRED2Q8IWF2 684 aa12.95□□□□□ -0.34
SMG6-215ENST00000574501 NUDT9Q9BW91 350 aa12.95□□□□□ -0.34
SMG6-215ENST00000574501 SLC2A8Q9NY64 477 aa12.95□□□□□ -0.34
SMG6-215ENST00000574501 MRPS2Q9Y399 296 aaKnown RBP12.95□□□□□ -0.34
SMG6-215ENST00000574501 METTL21EPA6NDL7 271 aa12.94□□□□□ -0.34
SMG6-215ENST00000574501 HLA-DQA2P01906 255 aa12.94□□□□□ -0.34
SMG6-215ENST00000574501 SLC6A9P48067 706 aa12.94□□□□□ -0.34
SMG6-215ENST00000574501 MGAT2Q10469 447 aa12.94□□□□□ -0.34
SMG6-215ENST00000574501 TOMM20Q15388 145 aa12.94□□□□□ -0.34
SMG6-215ENST00000574501 MESTQ5EB52 335 aa12.94□□□□□ -0.34
SMG6-215ENST00000574501 PYY3Q5JQD4 70 aa12.94□□□□□ -0.34
SMG6-215ENST00000574501 CSNK1A1LQ8N752 337 aa12.94□□□□□ -0.34
SMG6-215ENST00000574501 FAM46BQ96A09 425 aa12.94□□□□□ -0.34
SMG6-215ENST00000574501 SERINC2Q96SA4 455 aa12.94□□□□□ -0.34
SMG6-215ENST00000574501 INTS14Q96SY0 518 aa12.94□□□□□ -0.34
SMG6-215ENST00000574501 RAB11FIP5Q9BXF6 653 aa12.94□□□□□ -0.34
SMG6-215ENST00000574501 GRHPRQ9UBQ7 328 aa12.94□□□□□ -0.34
SMG6-215ENST00000574501 INSL6Q9Y581 213 aa12.94□□□□□ -0.34
SMG6-215ENST00000574501 CDH23Q9H251 3354 aa12.94□□□□□ -0.34
SMG6-215ENST00000574501 IGKV1D-42A0A075B6H8 117 aa12.94□□□□□ -0.34
SMG6-215ENST00000574501 TBC1D3DA0A087WVF3 549 aa12.94□□□□□ -0.34
SMG6-215ENST00000574501 TBC1D3IA0A087WXS9 549 aa12.94□□□□□ -0.34
SMG6-215ENST00000574501 TBC1D3LB9A6J9 549 aa12.94□□□□□ -0.34
SMG6-215ENST00000574501 ST8SIA5O15466 376 aa12.94□□□□□ -0.34
SMG6-215ENST00000574501 TBC1D3HP0C7X1 549 aa12.94□□□□□ -0.34
SMG6-215ENST00000574501 CX3CR1P49238 355 aa12.94□□□□□ -0.34
SMG6-215ENST00000574501 PSG6Q00889 435 aa12.94□□□□□ -0.34
SMG6-215ENST00000574501 SP3Q02447 781 aa12.94□□□□□ -0.34
SMG6-215ENST00000574501 EGR3Q06889 387 aa12.94□□□□□ -0.34
SMG6-215ENST00000574501 GPR18Q14330 331 aa12.94□□□□□ -0.34
SMG6-215ENST00000574501 TBC1D3CQ6IPX1 549 aa12.94□□□□□ -0.34
SMG6-215ENST00000574501 FBXO42Q6P3S6 717 aa12.94□□□□□ -0.34
SMG6-215ENST00000574501 Q6ZRG5 221 aa12.94□□□□□ -0.34
SMG6-215ENST00000574501 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.94□□□□□ -0.34
SMG6-215ENST00000574501 TBC1D3Q8IZP1 549 aaPredicted RBP12.94□□□□□ -0.34
SMG6-215ENST00000574501 ZNF383Q8NA42 475 aa12.94□□□□□ -0.34
SMG6-215ENST00000574501 GATSQ8NAP1 163 aa12.94□□□□□ -0.34
SMG6-215ENST00000574501 ASB5Q8WWX0 329 aa12.94□□□□□ -0.34
SMG6-215ENST00000574501 SLC25A44Q96H78 314 aaPredicted RBP12.94□□□□□ -0.34
SMG6-215ENST00000574501 SLC5A7Q9GZV3 580 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms