RNA–Protein interactions for RNA: ENST00000573270.1

LINC01996-201, Transcript of long intergenic non-protein coding RNA 1996, humanhuman

TSL 1 (best) BASIC

Gene LINC01996, Length 1,273 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01996-201ENST00000573270 ANKHD1Q8IWZ3 2542 aaKnown RBP11.75□□□□□ -0.53
LINC01996-201ENST00000573270 IGHV1-18A0A0C4DH31 117 aa11.75□□□□□ -0.53
LINC01996-201ENST00000573270 A0A1W2PQL4 384 aaPredicted RBP11.75□□□□□ -0.53
LINC01996-201ENST00000573270 TRIM64A6NGJ6 449 aa11.75□□□□□ -0.53
LINC01996-201ENST00000573270 ZNF878C9JN71 531 aa11.75□□□□□ -0.53
LINC01996-201ENST00000573270 J3QRE1 110 aa11.75□□□□□ -0.53
LINC01996-201ENST00000573270 M0R1B8 84 aa11.75□□□□□ -0.53
LINC01996-201ENST00000573270 PSMD9O00233 223 aa11.75□□□□□ -0.53
LINC01996-201ENST00000573270 NOL3O60936 208 aaKnown RBP11.75□□□□□ -0.53
LINC01996-201ENST00000573270 IGHA1P01876 353 aa11.75□□□□□ -0.53
LINC01996-201ENST00000573270 HOXB1P14653 301 aaPredicted RBP11.75□□□□□ -0.53
LINC01996-201ENST00000573270 PPP3CBP16298 524 aa11.75□□□□□ -0.53
LINC01996-201ENST00000573270 ZNF14P17017 642 aaPredicted RBP11.75□□□□□ -0.53
LINC01996-201ENST00000573270 CRHBPP24387 322 aa11.75□□□□□ -0.53
LINC01996-201ENST00000573270 ACTC1P68032 377 aa11.75□□□□□ -0.53
LINC01996-201ENST00000573270 ACTA1P68133 377 aa11.75□□□□□ -0.53
LINC01996-201ENST00000573270 HIST1H3AP68431 136 aa11.75□□□□□ -0.53
LINC01996-201ENST00000573270 SPOCK1Q08629 439 aa11.75□□□□□ -0.53
LINC01996-201ENST00000573270 HIST2H3PS2Q5TEC6 136 aa11.75□□□□□ -0.53
LINC01996-201ENST00000573270 ZNF773Q6PK81 442 aa11.75□□□□□ -0.53
LINC01996-201ENST00000573270 LRRN1Q6UXK5 716 aa11.75□□□□□ -0.53
LINC01996-201ENST00000573270 HIST2H3AQ71DI3 136 aa11.75□□□□□ -0.53
LINC01996-201ENST00000573270 SYT9Q86SS6 491 aa11.75□□□□□ -0.53
LINC01996-201ENST00000573270 P2RY8Q86VZ1 359 aa11.75□□□□□ -0.53
LINC01996-201ENST00000573270 CCDC36Q8IYA8 594 aa11.75□□□□□ -0.53
LINC01996-201ENST00000573270 ALDH16A1Q8IZ83 802 aa11.75□□□□□ -0.53
LINC01996-201ENST00000573270 ZNF454Q8N9F8 522 aa11.75□□□□□ -0.53
LINC01996-201ENST00000573270 THEM6Q8WUY1 208 aa11.75□□□□□ -0.53
LINC01996-201ENST00000573270 MUCL1Q96DR8 90 aa11.75□□□□□ -0.53
LINC01996-201ENST00000573270 ZNF75AQ96N20 296 aa11.75□□□□□ -0.53
LINC01996-201ENST00000573270 HDHD2Q9H0R4 259 aa11.75□□□□□ -0.53
LINC01996-201ENST00000573270 C1orf198Q9H425 327 aa11.75□□□□□ -0.53
LINC01996-201ENST00000573270 FGF20Q9NP95 211 aaPredicted RBP11.75□□□□□ -0.53
LINC01996-201ENST00000573270 MRPS18AQ9NVS2 196 aaKnown RBP11.75□□□□□ -0.53
LINC01996-201ENST00000573270 TIMM10BQ9Y5J6 103 aa11.75□□□□□ -0.53
LINC01996-201ENST00000573270 KLF2Q9Y5W3 355 aaPredicted RBP11.75□□□□□ -0.53
LINC01996-201ENST00000573270 DAPL1A0PJW8 107 aa11.74□□□□□ -0.53
LINC01996-201ENST00000573270 OR6C6A6NF89 314 aa11.74□□□□□ -0.53
LINC01996-201ENST00000573270 TUBAL3A6NHL2 446 aa11.74□□□□□ -0.53
LINC01996-201ENST00000573270 MAGEB4O15481 346 aaPredicted RBP11.74□□□□□ -0.53
LINC01996-201ENST00000573270 SYNGR3O43761 229 aa11.74□□□□□ -0.53
LINC01996-201ENST00000573270 TMCC2O75069 709 aa11.74□□□□□ -0.53
LINC01996-201ENST00000573270 FADS2O95864 444 aaKnown RBP11.74□□□□□ -0.53
LINC01996-201ENST00000573270 IGKV3-15P01624 115 aa11.74□□□□□ -0.53
LINC01996-201ENST00000573270 OR2T7P0C7T2 308 aa11.74□□□□□ -0.53
LINC01996-201ENST00000573270 CECR9P0C854 216 aa11.74□□□□□ -0.53
LINC01996-201ENST00000573270 CBR1P16152 277 aa11.74□□□□□ -0.53
LINC01996-201ENST00000573270 IGFBP2P18065 325 aa11.74□□□□□ -0.53
LINC01996-201ENST00000573270 ALOX5APP20292 161 aa11.74□□□□□ -0.53
LINC01996-201ENST00000573270 APEX1P27695 318 aaKnown RBP11.74□□□□□ -0.53
LINC01996-201ENST00000573270 ARR3P36575 388 aa11.74□□□□□ -0.53
LINC01996-201ENST00000573270 SLC35A2P78381 396 aa11.74□□□□□ -0.53
LINC01996-201ENST00000573270 KLHL22Q53GT1 634 aa11.74□□□□□ -0.53
LINC01996-201ENST00000573270 ELFN2Q5R3F8 820 aa11.74□□□□□ -0.53
LINC01996-201ENST00000573270 GPR141Q7Z602 305 aa11.74□□□□□ -0.53
LINC01996-201ENST00000573270 STX19Q8N4C7 294 aa11.74□□□□□ -0.53
LINC01996-201ENST00000573270 CPEB3Q8NE35 698 aaKnown RBP11.74□□□□□ -0.53
LINC01996-201ENST00000573270 GJC3Q8NFK1 279 aa11.74□□□□□ -0.53
LINC01996-201ENST00000573270 OR2T27Q8NH04 317 aa11.74□□□□□ -0.53
LINC01996-201ENST00000573270 RNF133Q8WVZ7 376 aa11.74□□□□□ -0.53
LINC01996-201ENST00000573270 HSD17B8Q92506 261 aa11.74□□□□□ -0.53
LINC01996-201ENST00000573270 SLC7A6Q92536 515 aa11.74□□□□□ -0.53
LINC01996-201ENST00000573270 FCGR1BQ92637 280 aa11.74□□□□□ -0.53
LINC01996-201ENST00000573270 MNTQ99583 582 aa11.74□□□□□ -0.53
LINC01996-201ENST00000573270 ATF6BQ99941 703 aa11.74□□□□□ -0.53
LINC01996-201ENST00000573270 USB1Q9BQ65 265 aaKnown RBP11.74□□□□□ -0.53
LINC01996-201ENST00000573270 WACQ9BTA9 647 aa11.74□□□□□ -0.53
LINC01996-201ENST00000573270 CENPMQ9NSP4 180 aa11.74□□□□□ -0.53
LINC01996-201ENST00000573270 DDX28Q9NUL7 540 aaKnown RBP11.74□□□□□ -0.53
LINC01996-201ENST00000573270 CRIM1Q9NZV1 1036 aa11.74□□□□□ -0.53
LINC01996-201ENST00000573270 ERVK-18Q9QC07 812 aa11.74□□□□□ -0.53
LINC01996-201ENST00000573270 CRNNQ9UBG3 495 aaPredicted RBP11.74□□□□□ -0.53
LINC01996-201ENST00000573270 IKZF2Q9UKS7 526 aa11.74□□□□□ -0.53
LINC01996-201ENST00000573270 FBXL3Q9UKT7 428 aa11.74□□□□□ -0.53
LINC01996-201ENST00000573270 DIMT1Q9UNQ2 313 aaKnown RBP11.74□□□□□ -0.53
LINC01996-201ENST00000573270 LRP12Q9Y561 859 aa11.74□□□□□ -0.53
LINC01996-201ENST00000573270 TMEM14AQ9Y6G1 99 aa11.74□□□□□ -0.53
LINC01996-201ENST00000573270 IQCMA0A1B0GVH7 501 aa11.73□□□□□ -0.53
LINC01996-201ENST00000573270 DPPA5A6NC42 116 aa11.73□□□□□ -0.53
LINC01996-201ENST00000573270 PTGES3LE9PB15 166 aa11.73□□□□□ -0.53
LINC01996-201ENST00000573270 ZNF701M0R085 212 aaPredicted RBP11.73□□□□□ -0.53
LINC01996-201ENST00000573270 PHYHO14832 338 aa11.73□□□□□ -0.53
LINC01996-201ENST00000573270 IGLV1-44P01699 117 aa11.73□□□□□ -0.53
LINC01996-201ENST00000573270 MT-ND2P03891 347 aa11.73□□□□□ -0.53
LINC01996-201ENST00000573270 CDK1P06493 297 aa11.73□□□□□ -0.53
LINC01996-201ENST00000573270 DBHP09172 617 aa11.73□□□□□ -0.53
LINC01996-201ENST00000573270 CCL2P13500 99 aa11.73□□□□□ -0.53
LINC01996-201ENST00000573270 ATP6V1B1P15313 513 aa11.73□□□□□ -0.53
LINC01996-201ENST00000573270 OPRL1P41146 370 aa11.73□□□□□ -0.53
LINC01996-201ENST00000573270 ETV1P50549 477 aa11.73□□□□□ -0.53
LINC01996-201ENST00000573270 SPTBN1Q01082 2364 aaKnown RBP11.73□□□□□ -0.53
LINC01996-201ENST00000573270 HGFACQ04756 655 aa11.73□□□□□ -0.53
LINC01996-201ENST00000573270 PLP2Q04941 152 aa11.73□□□□□ -0.53
LINC01996-201ENST00000573270 ST3GAL4Q11206 333 aa11.73□□□□□ -0.53
LINC01996-201ENST00000573270 TP53I3Q53FA7 332 aa11.73□□□□□ -0.53
LINC01996-201ENST00000573270 ZNF322Q6U7Q0 402 aaPredicted RBP11.73□□□□□ -0.53
LINC01996-201ENST00000573270 MEX3BQ6ZN04 569 aaKnown RBP11.73□□□□□ -0.53
LINC01996-201ENST00000573270 PLEKHG7Q6ZR37 379 aa11.73□□□□□ -0.53
LINC01996-201ENST00000573270 ACBD7Q8N6N7 88 aa11.73□□□□□ -0.53
LINC01996-201ENST00000573270 SLC30A7Q8NEW0 376 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms