RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 COX5BP10606 129 aa15.15■□□□□ 0.02
CTDNEP1-207ENST00000572043 MAGEA2P43356 314 aa15.15■□□□□ 0.02
CTDNEP1-207ENST00000572043 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.15■□□□□ 0.02
CTDNEP1-207ENST00000572043 PCGF3Q3KNV8 242 aa15.15■□□□□ 0.02
CTDNEP1-207ENST00000572043 FAM98BQ52LJ0 330 aaKnown RBP15.15■□□□□ 0.02
CTDNEP1-207ENST00000572043 AVPI1Q5T686 147 aa15.15■□□□□ 0.02
CTDNEP1-207ENST00000572043 LINC00346Q8IVM7 164 aa15.15■□□□□ 0.02
CTDNEP1-207ENST00000572043 OR52L1Q8NGH7 329 aa15.15■□□□□ 0.02
CTDNEP1-207ENST00000572043 OR1F12Q8NHA8 337 aa15.15■□□□□ 0.02
CTDNEP1-207ENST00000572043 BCAS4Q8TDM0 211 aa15.15■□□□□ 0.02
CTDNEP1-207ENST00000572043 PLA2G12AQ9BZM1 189 aa15.15■□□□□ 0.02
CTDNEP1-207ENST00000572043 MAGIXQ9H6Y5 334 aa15.15■□□□□ 0.02
CTDNEP1-207ENST00000572043 REEP1Q9H902 201 aa15.15■□□□□ 0.02
CTDNEP1-207ENST00000572043 SAP30LQ9HAJ7 183 aa15.15■□□□□ 0.02
CTDNEP1-207ENST00000572043 MSL2Q9HCI7 577 aa15.15■□□□□ 0.02
CTDNEP1-207ENST00000572043 CDC42EP3Q9UKI2 254 aa15.15■□□□□ 0.02
CTDNEP1-207ENST00000572043 SAMHD1Q9Y3Z3 626 aaKnown RBP15.15■□□□□ 0.02
CTDNEP1-207ENST00000572043 CDH10Q9Y6N8 788 aa15.15■□□□□ 0.02
CTDNEP1-207ENST00000572043 OR6C68A6NDL8 312 aa15.14■□□□□ 0.01
CTDNEP1-207ENST00000572043 RP2O75695 350 aa15.14■□□□□ 0.01
CTDNEP1-207ENST00000572043 MMP15P51511 669 aa15.14■□□□□ 0.01
CTDNEP1-207ENST00000572043 HMGA2P52926 109 aa15.14■□□□□ 0.01
CTDNEP1-207ENST00000572043 MVKQ03426 396 aa15.14■□□□□ 0.01
CTDNEP1-207ENST00000572043 PSG7Q13046 419 aa15.14■□□□□ 0.01
CTDNEP1-207ENST00000572043 HNRNPA0Q13151 305 aaKnown RBP15.14■□□□□ 0.01
CTDNEP1-207ENST00000572043 OR2T5Q6IEZ7 315 aa15.14■□□□□ 0.01
CTDNEP1-207ENST00000572043 TRPM8Q7Z2W7 1104 aa15.14■□□□□ 0.01
CTDNEP1-207ENST00000572043 CYB561A3Q8NBI2 242 aa15.14■□□□□ 0.01
CTDNEP1-207ENST00000572043 OR2T29Q8NH02 315 aa15.14■□□□□ 0.01
CTDNEP1-207ENST00000572043 CLDND2Q8NHS1 167 aa15.14■□□□□ 0.01
CTDNEP1-207ENST00000572043 ASB9Q96DX5 294 aa15.14■□□□□ 0.01
CTDNEP1-207ENST00000572043 MDFIQ99750 246 aa15.14■□□□□ 0.01
CTDNEP1-207ENST00000572043 TRIM15Q9C019 465 aa15.14■□□□□ 0.01
CTDNEP1-207ENST00000572043 LPAR2Q9HBW0 351 aa15.14■□□□□ 0.01
CTDNEP1-207ENST00000572043 TBC1D23Q9NUY8 699 aa15.14■□□□□ 0.01
CTDNEP1-207ENST00000572043 FAM53CQ9NYF3 392 aa15.14■□□□□ 0.01
CTDNEP1-207ENST00000572043 STARD10Q9Y365 291 aa15.14■□□□□ 0.01
CTDNEP1-207ENST00000572043 LHFPL6Q9Y693 200 aa15.14■□□□□ 0.01
CTDNEP1-207ENST00000572043 IGHV1-69-2A0A0G2JMI3 117 aa15.13■□□□□ 0.01
CTDNEP1-207ENST00000572043 OR6C6A6NF89 314 aa15.13■□□□□ 0.01
CTDNEP1-207ENST00000572043 ICMTO60725 284 aa15.13■□□□□ 0.01
CTDNEP1-207ENST00000572043 UBOX5O94941 541 aa15.13■□□□□ 0.01
CTDNEP1-207ENST00000572043 SOX14O95416 240 aa15.13■□□□□ 0.01
CTDNEP1-207ENST00000572043 TFP02787 698 aa15.13■□□□□ 0.01
CTDNEP1-207ENST00000572043 GSTM3P21266 225 aa15.13■□□□□ 0.01
CTDNEP1-207ENST00000572043 PYCR1P32322 319 aa15.13■□□□□ 0.01
CTDNEP1-207ENST00000572043 TMEM33P57088 247 aa15.13■□□□□ 0.01
CTDNEP1-207ENST00000572043 MRPS11P82912 194 aaKnown RBP15.13■□□□□ 0.01
CTDNEP1-207ENST00000572043 TEKQ02763 1124 aa15.13■□□□□ 0.01
CTDNEP1-207ENST00000572043 KCNMB1Q16558 191 aa15.13■□□□□ 0.01
CTDNEP1-207ENST00000572043 FAM120AOSQ5T036 256 aa15.13■□□□□ 0.01
CTDNEP1-207ENST00000572043 ZNF770Q6IQ21 691 aaPredicted RBP15.13■□□□□ 0.01
CTDNEP1-207ENST00000572043 ZNF771Q7L3S4 317 aaPredicted RBP15.13■□□□□ 0.01
CTDNEP1-207ENST00000572043 LINC01356Q8N9X3 169 aa15.13■□□□□ 0.01
CTDNEP1-207ENST00000572043 OR8D4Q8NGM9 314 aa15.13■□□□□ 0.01
CTDNEP1-207ENST00000572043 HPS1Q92902 700 aa15.13■□□□□ 0.01
CTDNEP1-207ENST00000572043 CDADC1Q9BWV3 514 aa15.13■□□□□ 0.01
CTDNEP1-207ENST00000572043 RACGAP1Q9H0H5 632 aa15.13■□□□□ 0.01
CTDNEP1-207ENST00000572043 TBCCD1Q9NVR7 557 aa15.13■□□□□ 0.01
CTDNEP1-207ENST00000572043 TMEM160Q9NX00 188 aa15.13■□□□□ 0.01
CTDNEP1-207ENST00000572043 NKIRAS2Q9NYR9 191 aa15.13■□□□□ 0.01
CTDNEP1-207ENST00000572043 BHLHE40O14503 412 aa15.12■□□□□ 0.01
CTDNEP1-207ENST00000572043 IDH3BO43837 385 aa15.12■□□□□ 0.01
CTDNEP1-207ENST00000572043 RBMXP38159 391 aaKnown RBP15.12■□□□□ 0.01
CTDNEP1-207ENST00000572043 CRYBB2P43320 205 aa15.12■□□□□ 0.01
CTDNEP1-207ENST00000572043 ERFP50548 548 aa15.12■□□□□ 0.01
CTDNEP1-207ENST00000572043 CDH15P55291 814 aa15.12■□□□□ 0.01
CTDNEP1-207ENST00000572043 SPRNQ5BIV9 151 aa15.12■□□□□ 0.01
CTDNEP1-207ENST00000572043 PGM2L1Q6PCE3 622 aa15.12■□□□□ 0.01
CTDNEP1-207ENST00000572043 CFAP77Q6ZQR2 320 aa15.12■□□□□ 0.01
CTDNEP1-207ENST00000572043 C1orf174Q8IYL3 243 aa15.12■□□□□ 0.01
CTDNEP1-207ENST00000572043 OR5AS1Q8N127 324 aa15.12■□□□□ 0.01
CTDNEP1-207ENST00000572043 LINC00471Q8N535 108 aa15.12■□□□□ 0.01
CTDNEP1-207ENST00000572043 NPEPL1Q8NDH3 523 aa15.12■□□□□ 0.01
CTDNEP1-207ENST00000572043 GJC3Q8NFK1 279 aa15.12■□□□□ 0.01
CTDNEP1-207ENST00000572043 SLC26A10Q8NG04 563 aa15.12■□□□□ 0.01
CTDNEP1-207ENST00000572043 OR51L1Q8NGJ5 315 aa15.12■□□□□ 0.01
CTDNEP1-207ENST00000572043 CCL17Q92583 94 aa15.12■□□□□ 0.01
CTDNEP1-207ENST00000572043 CMBLQ96DG6 245 aa15.12■□□□□ 0.01
CTDNEP1-207ENST00000572043 CHID1Q9BWS9 393 aa15.12■□□□□ 0.01
CTDNEP1-207ENST00000572043 TSSK6Q9BXA6 273 aa15.12■□□□□ 0.01
CTDNEP1-207ENST00000572043 C1orf21Q9H246 121 aa15.12■□□□□ 0.01
CTDNEP1-207ENST00000572043 CYSLTR2Q9NS75 346 aa15.12■□□□□ 0.01
CTDNEP1-207ENST00000572043 ARMC1Q9NVT9 282 aa15.12■□□□□ 0.01
CTDNEP1-207ENST00000572043 PTTG3PQ9NZH4 202 aa15.12■□□□□ 0.01
CTDNEP1-207ENST00000572043 LPAR3Q9UBY5 353 aa15.12■□□□□ 0.01
CTDNEP1-207ENST00000572043 PURGQ9UJV8 347 aaKnown RBP15.12■□□□□ 0.01
CTDNEP1-207ENST00000572043 ANK3Q12955 4377 aaKnown RBP15.11■□□□□ 0.01
CTDNEP1-207ENST00000572043 TVP23AA6NH52 213 aa15.11■□□□□ 0.01
CTDNEP1-207ENST00000572043 H3BSA7 217 aa15.11■□□□□ 0.01
CTDNEP1-207ENST00000572043 ACOT8O14734 319 aa15.11■□□□□ 0.01
CTDNEP1-207ENST00000572043 GYG2O15488 501 aa15.11■□□□□ 0.01
CTDNEP1-207ENST00000572043 IFNA2P01563 188 aa15.11■□□□□ 0.01
CTDNEP1-207ENST00000572043 FAM157CP0CG43 387 aa15.11■□□□□ 0.01
CTDNEP1-207ENST00000572043 RAP2AP10114 183 aa15.11■□□□□ 0.01
CTDNEP1-207ENST00000572043 MICAQ29983 383 aa15.11■□□□□ 0.01
CTDNEP1-207ENST00000572043 CR1LQ2VPA4 569 aa15.11■□□□□ 0.01
CTDNEP1-207ENST00000572043 HFEQ30201 348 aa15.11■□□□□ 0.01
CTDNEP1-207ENST00000572043 RPL13AP3Q6NVV1 102 aa15.11■□□□□ 0.01
CTDNEP1-207ENST00000572043 RASSF6Q6ZTQ3 369 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms