RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 MMP15P51511 669 aa10.52□□□□□ -0.73
CTDNEP1-205ENST00000570828 RPS6KA3P51812 740 aa10.52□□□□□ -0.73
CTDNEP1-205ENST00000570828 SMIM11AP58511 58 aa10.52□□□□□ -0.73
CTDNEP1-205ENST00000570828 SPIBQ01892 262 aa10.52□□□□□ -0.73
CTDNEP1-205ENST00000570828 MVKQ03426 396 aa10.52□□□□□ -0.73
CTDNEP1-205ENST00000570828 AQP6Q13520 282 aa10.52□□□□□ -0.73
CTDNEP1-205ENST00000570828 SEC23BQ15437 767 aa10.52□□□□□ -0.73
CTDNEP1-205ENST00000570828 SAMD4BQ5PRF9 694 aaKnown RBP10.52□□□□□ -0.73
CTDNEP1-205ENST00000570828 AVPI1Q5T686 147 aa10.52□□□□□ -0.73
CTDNEP1-205ENST00000570828 DPY19L2P2Q6ZN68 376 aa10.52□□□□□ -0.73
CTDNEP1-205ENST00000570828 ZER1Q7Z7L7 766 aa10.52□□□□□ -0.73
CTDNEP1-205ENST00000570828 GLB1L2Q8IW92 636 aa10.52□□□□□ -0.73
CTDNEP1-205ENST00000570828 PGAM4Q8N0Y7 254 aa10.52□□□□□ -0.73
CTDNEP1-205ENST00000570828 NPEPL1Q8NDH3 523 aa10.52□□□□□ -0.73
CTDNEP1-205ENST00000570828 MCUR1Q96AQ8 359 aa10.52□□□□□ -0.73
CTDNEP1-205ENST00000570828 TMEM186Q96B77 213 aa10.52□□□□□ -0.73
CTDNEP1-205ENST00000570828 ELMOD3Q96FG2 381 aa10.52□□□□□ -0.73
CTDNEP1-205ENST00000570828 PYURFQ96I23 114 aa10.52□□□□□ -0.73
CTDNEP1-205ENST00000570828 DHRS1Q96LJ7 313 aa10.52□□□□□ -0.73
CTDNEP1-205ENST00000570828 NSMCE2Q96MF7 247 aa10.52□□□□□ -0.73
CTDNEP1-205ENST00000570828 NRIP3Q9NQ35 241 aa10.52□□□□□ -0.73
CTDNEP1-205ENST00000570828 HIF1ANQ9NWT6 349 aa10.52□□□□□ -0.73
CTDNEP1-205ENST00000570828 PLEK2Q9NYT0 353 aa10.52□□□□□ -0.73
CTDNEP1-205ENST00000570828 VSX1Q9NZR4 365 aaPredicted RBP10.52□□□□□ -0.73
CTDNEP1-205ENST00000570828 GRIP1Q9Y3R0 1128 aa10.52□□□□□ -0.73
CTDNEP1-205ENST00000570828 IER3IP1Q9Y5U9 82 aa10.52□□□□□ -0.73
CTDNEP1-205ENST00000570828 ZSCAN5BA6NJL1 495 aa10.51□□□□□ -0.73
CTDNEP1-205ENST00000570828 FAM157AC9JC47 383 aa10.51□□□□□ -0.73
CTDNEP1-205ENST00000570828 PTP4A3O75365 173 aa10.51□□□□□ -0.73
CTDNEP1-205ENST00000570828 GADD45GO95257 159 aa10.51□□□□□ -0.73
CTDNEP1-205ENST00000570828 GNGT1P63211 74 aa10.51□□□□□ -0.73
CTDNEP1-205ENST00000570828 KRTAP24-1Q3LI83 254 aa10.51□□□□□ -0.73
CTDNEP1-205ENST00000570828 SHQ1Q6PI26 577 aaKnown RBP10.51□□□□□ -0.73
CTDNEP1-205ENST00000570828 DNM1P34Q6PK57 102 aa10.51□□□□□ -0.73
CTDNEP1-205ENST00000570828 SMARCD3Q6STE5 483 aa10.51□□□□□ -0.73
CTDNEP1-205ENST00000570828 RAB1CQ92928 201 aa10.51□□□□□ -0.73
CTDNEP1-205ENST00000570828 RAB39BQ96DA2 213 aa10.51□□□□□ -0.73
CTDNEP1-205ENST00000570828 LRRC37BQ96QE4 947 aa10.51□□□□□ -0.73
CTDNEP1-205ENST00000570828 DIRC2Q96SL1 478 aa10.51□□□□□ -0.73
CTDNEP1-205ENST00000570828 TBCCD1Q9NVR7 557 aa10.51□□□□□ -0.73
CTDNEP1-205ENST00000570828 NDE1Q9NXR1 346 aa10.51□□□□□ -0.73
CTDNEP1-205ENST00000570828 ASH2LQ9UBL3 628 aa10.51□□□□□ -0.73
CTDNEP1-205ENST00000570828 TAGLN3Q9UI15 199 aa10.51□□□□□ -0.73
CTDNEP1-205ENST00000570828 ZDHHC8Q9ULC8 765 aa10.51□□□□□ -0.73
CTDNEP1-205ENST00000570828 COA3Q9Y2R0 106 aaPredicted RBP10.51□□□□□ -0.73
CTDNEP1-205ENST00000570828 CACNG2Q9Y698 323 aa10.51□□□□□ -0.73
CTDNEP1-205ENST00000570828 KRTAP9-6A0A140TA67 174 aa10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 ARPC2O15144 300 aa10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 OR10H3O60404 316 aa10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 DCTN3O75935 186 aa10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 PPP1R3DO95685 299 aa10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 TXNDC12O95881 172 aa10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 SEMG1P04279 462 aa10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 FABP3P05413 133 aa10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 ANPEPP15144 967 aa10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 TUBG1P23258 451 aa10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 FPR3P25089 353 aa10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 IFNGR2P38484 337 aa10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 CENPAP49450 140 aa10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 FXYD6P3P58550 94 aa10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 LMO4P61968 165 aa10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 LSM6P62312 80 aaKnown RBP10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 MXRA7P84157 204 aa10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 SLC3A1Q07837 685 aa10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 MTX3Q5HYI7 312 aa10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 TMEM255AQ5JRV8 349 aa10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 LIPNQ5VXI9 398 aa10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 OTPQ5XKR4 325 aa10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 C16orf89Q6UX73 402 aa10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 PTCHD4Q6ZW05 846 aa10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 RFLNBQ8N5W9 214 aa10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 CCL17Q92583 94 aa10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 COG8Q96MW5 612 aa10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 ERMAPQ96PL5 475 aaPredicted RBP10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 CDRT15Q96T59 188 aa10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 GAL3ST1Q99999 423 aa10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 FUZQ9BT04 418 aa10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 NUAK2Q9H093 628 aa10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 ZNF665Q9H7R5 613 aa10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 MSL2Q9HCI7 577 aa10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 TUBG2Q9NRH3 451 aa10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 TMCC3Q9ULS5 477 aa10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 ARL2BPQ9Y2Y0 163 aa10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 WIPI2Q9Y4P8 454 aa10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 YLPM1P49750 1951 aaKnown RBP10.5□□□□□ -0.73
CTDNEP1-205ENST00000570828 TRAV20A0A0B4J274 112 aa10.49□□□□□ -0.73
CTDNEP1-205ENST00000570828 ISPDA4D126 451 aa10.49□□□□□ -0.73
CTDNEP1-205ENST00000570828 OR6C6A6NF89 314 aa10.49□□□□□ -0.73
CTDNEP1-205ENST00000570828 IMPA2O14732 288 aa10.49□□□□□ -0.73
CTDNEP1-205ENST00000570828 TCF21O43680 179 aa10.49□□□□□ -0.73
CTDNEP1-205ENST00000570828 MPZL1O95297 269 aa10.49□□□□□ -0.73
CTDNEP1-205ENST00000570828 ADH4P08319 380 aa10.49□□□□□ -0.73
CTDNEP1-205ENST00000570828 TNFSF4P23510 183 aa10.49□□□□□ -0.73
CTDNEP1-205ENST00000570828 CRABP1P29762 137 aa10.49□□□□□ -0.73
CTDNEP1-205ENST00000570828 RRM2P31350 389 aa10.49□□□□□ -0.73
CTDNEP1-205ENST00000570828 SLC6A6P31641 620 aa10.49□□□□□ -0.73
CTDNEP1-205ENST00000570828 MSX2P35548 267 aaPredicted RBP10.49□□□□□ -0.73
CTDNEP1-205ENST00000570828 GYS2P54840 703 aa10.49□□□□□ -0.73
CTDNEP1-205ENST00000570828 TNFAIP6P98066 277 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms