RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 LOXP28300 417 aaPredicted RBP4.17□□□□□ -1.74
CNOT1-219ENST00000569882 PCSK6P29122 969 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 CRABP1P29762 137 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 SDHAP31040 664 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 THBS4P35443 961 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 HTR5AP47898 357 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 EFNA4P52798 201 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 KLF3P57682 345 aaPredicted RBP4.17□□□□□ -1.74
CNOT1-219ENST00000569882 MRPS34P82930 218 aaKnown RBP4.17□□□□□ -1.74
CNOT1-219ENST00000569882 SCRN3Q0VDG4 424 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 TNK1Q13470 666 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 FLOT2Q14254 428 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 TRIM25Q14258 630 aaKnown RBP4.17□□□□□ -1.74
CNOT1-219ENST00000569882 GGTLC2Q14390 218 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 TAF13Q15543 124 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 TESK1Q15569 626 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 GFOD2Q3B7J2 385 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 ALKBH6Q3KRA9 238 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 NRN1LQ496H8 165 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 ZMAT1Q5H9K5 638 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 PABPC1L2AQ5JQF8 200 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 CLEC12AQ5QGZ9 265 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 C1orf94Q6P1W5 598 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 C8orf82Q6P1X6 216 aaPredicted RBP4.17□□□□□ -1.74
CNOT1-219ENST00000569882 LEG1Q6P5S2 330 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 B3GLCTQ6Y288 498 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 DPY19L2P2Q6ZN68 376 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 TMPRSS11FQ6ZWK6 438 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 ADCK1Q86TW2 530 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 DTX2Q86UW9 622 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 SKA3Q8IX90 412 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 ZNF525Q8N782 197 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 FAM86B1Q8N7N1 296 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 ARIH2OSQ8N7S6 290 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 SPERTQ8NA61 448 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 ZNF540Q8NDQ6 660 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 NUP37Q8NFH4 326 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 OR1J1Q8NGS3 322 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 TEX47Q8TBZ9 253 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 SLC7A13Q8TCU3 470 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 GNPDA2Q8TDQ7 276 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 LIPHQ8WWY8 451 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 HDAC2Q92769 488 aaKnown RBP4.17□□□□□ -1.74
CNOT1-219ENST00000569882 RASD2Q96D21 266 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 PLEKHA8Q96JA3 519 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 Q96M85 177 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 FOXN4Q96NZ1 517 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 TSPAN32Q96QS1 320 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 RSPO3Q9BXY4 272 aaPredicted RBP4.17□□□□□ -1.74
CNOT1-219ENST00000569882 REG4Q9BYZ8 158 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 BCL2L14Q9BZR8 327 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 SYT4Q9H2B2 425 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 TPK1Q9H3S4 243 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 MS4A5Q9H3V2 200 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 ZNF442Q9H7R0 627 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 SIAEQ9HAT2 523 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 SMURF2Q9HAU4 748 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 ELOVL3Q9HB03 270 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 MYOZ1Q9NP98 299 aaPredicted RBP4.17□□□□□ -1.74
CNOT1-219ENST00000569882 IL1RAPQ9NPH3 570 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 PAPOLBQ9NRJ5 636 aaKnown RBP4.17□□□□□ -1.74
CNOT1-219ENST00000569882 MAN2C1Q9NTJ4 1040 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 ZNF701Q9NV72 531 aaPredicted RBP4.17□□□□□ -1.74
CNOT1-219ENST00000569882 NKIRAS2Q9NYR9 191 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 PLEK2Q9NYT0 353 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 NDRG4Q9ULP0 352 aaKnown RBP4.17□□□□□ -1.74
CNOT1-219ENST00000569882 ADAM18Q9Y3Q7 739 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 TIMM10BQ9Y5J6 103 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 IER3IP1Q9Y5U9 82 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 U3KQV3 271 aa4.17□□□□□ -1.74
CNOT1-219ENST00000569882 LRBAP50851 2863 aa4.16□□□□□ -1.74
CNOT1-219ENST00000569882 FBN2P35556 2912 aa4.16□□□□□ -1.74
CNOT1-219ENST00000569882 ARFGEF3Q5TH69 2177 aa4.16□□□□□ -1.74
CNOT1-219ENST00000569882 C2CD3Q4AC94 2353 aa4.16□□□□□ -1.74
CNOT1-219ENST00000569882 DHRS12A0PJE2 317 aa4.16□□□□□ -1.74
CNOT1-219ENST00000569882 PRSS37A4D1T9 235 aa4.16□□□□□ -1.74
CNOT1-219ENST00000569882 NPIPB13A6NJU9 1138 aa4.16□□□□□ -1.74
CNOT1-219ENST00000569882 RIIAD1A6NNX1 92 aa4.16□□□□□ -1.74
CNOT1-219ENST00000569882 NPIPB4C9JG80 1138 aa4.16□□□□□ -1.74
CNOT1-219ENST00000569882 CDC42EP2O14613 210 aa4.16□□□□□ -1.74
CNOT1-219ENST00000569882 FFAR1O14842 300 aa4.16□□□□□ -1.74
CNOT1-219ENST00000569882 SGCEO43556 437 aa4.16□□□□□ -1.74
CNOT1-219ENST00000569882 SYNGR3O43761 229 aa4.16□□□□□ -1.74
CNOT1-219ENST00000569882 AHCYL1O43865 530 aa4.16□□□□□ -1.74
CNOT1-219ENST00000569882 TIMM8AO60220 97 aaPredicted RBP4.16□□□□□ -1.74
CNOT1-219ENST00000569882 NDUFS7O75251 213 aa4.16□□□□□ -1.74
CNOT1-219ENST00000569882 DNAJC8O75937 253 aaPredicted RBP4.16□□□□□ -1.74
CNOT1-219ENST00000569882 IFNGP01579 166 aa4.16□□□□□ -1.74
CNOT1-219ENST00000569882 IGLV1-44P01699 117 aa4.16□□□□□ -1.74
CNOT1-219ENST00000569882 IGHMP01871 453 aa4.16□□□□□ -1.74
CNOT1-219ENST00000569882 ADRA2AP08913 450 aa4.16□□□□□ -1.74
CNOT1-219ENST00000569882 RAP2AP10114 183 aa4.16□□□□□ -1.74
CNOT1-219ENST00000569882 APEHP13798 732 aaKnown RBP4.16□□□□□ -1.74
CNOT1-219ENST00000569882 DAOP14920 347 aa4.16□□□□□ -1.74
CNOT1-219ENST00000569882 SLC25A16P16260 332 aa4.16□□□□□ -1.74
CNOT1-219ENST00000569882 ZNF14P17017 642 aaPredicted RBP4.16□□□□□ -1.74
CNOT1-219ENST00000569882 ZNF3P17036 446 aa4.16□□□□□ -1.74
CNOT1-219ENST00000569882 ZNF32P17041 273 aa4.16□□□□□ -1.74
CNOT1-219ENST00000569882 HOXB6P17509 224 aaKnown RBP4.16□□□□□ -1.74
CNOT1-219ENST00000569882 PAICSP22234 425 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms