RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 BARHL1Q9BZE3 327 aa5.98□□□□□ -1.45
SMG1-217ENST00000569764 DHCR7Q9UBM7 475 aaKnown RBP5.98□□□□□ -1.45
SMG1-217ENST00000569764 SLCO1B1Q9Y6L6 691 aa5.98□□□□□ -1.45
SMG1-217ENST00000569764 OTOGLQ3ZCN5 2332 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 SUPT7LO94864 414 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 FARS2O95363 451 aaKnown RBP5.97□□□□□ -1.45
SMG1-217ENST00000569764 CLDN9O95484 217 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 WNT11O96014 354 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 CTSLP07711 333 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 PCSK6P29122 969 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 EPHA2P29317 976 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 CHRNB4P30926 498 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 BDKRB1P46663 353 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 XKP51811 444 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 RPS23P62266 143 aaKnown RBP5.97□□□□□ -1.45
SMG1-217ENST00000569764 RPL23AP62750 156 aaKnown RBP5.97□□□□□ -1.45
SMG1-217ENST00000569764 TSNQ15631 228 aaKnown RBP5.97□□□□□ -1.45
SMG1-217ENST00000569764 ELAVL1Q15717 326 aaKnown RBP5.97□□□□□ -1.45
SMG1-217ENST00000569764 RNF212Q495C1 297 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 SFT2D3Q587I9 215 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 C6orf136Q5SQH8 315 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 ZNF678Q5SXM1 525 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 MRPL14Q6P1L8 145 aaKnown RBP5.97□□□□□ -1.45
SMG1-217ENST00000569764 QSOX2Q6ZRP7 698 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 ESPNLQ6ZVH7 1005 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 DPY19L4Q7Z388 723 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 OR9I1Q8NGQ6 314 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 CD200R1Q8TD46 325 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 SMIM12Q96EX1 92 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 RNF170Q96K19 258 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 MRPL57Q9BQC6 102 aaKnown RBP5.97□□□□□ -1.45
SMG1-217ENST00000569764 SLC6A13Q9NSD5 602 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 LIN7CQ9NUP9 197 aaKnown RBP5.97□□□□□ -1.45
SMG1-217ENST00000569764 CMAHPQ9Y471 501 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 MUC22E2RYF6 1773 aaPredicted RBP5.97□□□□□ -1.45
SMG1-217ENST00000569764 ALDOCP09972 364 aaKnown RBP5.97□□□□□ -1.45
SMG1-217ENST00000569764 JUNBP17275 347 aaPredicted RBP5.97□□□□□ -1.45
SMG1-217ENST00000569764 HIST1H1TP22492 207 aaPredicted RBP5.97□□□□□ -1.45
SMG1-217ENST00000569764 CEACAM6P40199 344 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 ZFP36L2P47974 494 aaKnown RBP5.97□□□□□ -1.45
SMG1-217ENST00000569764 CD81P60033 236 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 UBE2NP61088 152 aaKnown RBP5.97□□□□□ -1.45
SMG1-217ENST00000569764 MVKQ03426 396 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 PLP2Q04941 152 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 RBBP4Q09028 425 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.97□□□□□ -1.45
SMG1-217ENST00000569764 NANOGP8Q6NSW7 305 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 SLC22A15Q8IZD6 547 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 PRSS35Q8N3Z0 413 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 ZNF383Q8NA42 475 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 ZNF563Q8TA94 476 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 R3HDM4Q96D70 268 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 MICU1Q9BPX6 476 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 NICN1Q9BSH3 213 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 LANCL2Q9NS86 450 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 STARD5Q9NSY2 213 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 C20orf141Q9NUB4 165 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 PLEK2Q9NYT0 353 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 CEP250Q9BV73 2442 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 PLXNA2O75051 1894 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 PCNX2A6NKB5 2137 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 ZFC3H1O60293 1989 aaKnown RBP5.97□□□□□ -1.45
SMG1-217ENST00000569764 TRBV11-1A0A0K0K1C0 115 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 NPEPPSL1A6NEC2 478 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 A6NIZ1 184 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 NKX2-8O15522 239 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 CYB5BO43169 146 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 XPNPEP2O43895 674 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 ACTL6AO96019 429 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 CST1P01037 141 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 RAB38P57729 211 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 RAB2AP61019 212 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 SLBPQ14493 270 aaKnown RBP eCLIP5.97□□□□□ -1.45
SMG1-217ENST00000569764 NKAPLQ5M9Q1 402 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 ZNF648Q5T619 568 aaPredicted RBP5.97□□□□□ -1.45
SMG1-217ENST00000569764 ZNF585AQ6P3V2 769 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 ACOT7LQ6ZUV0 252 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 ZNF440Q8IYI8 595 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 CPNE9Q8IYJ1 553 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 OR6V1Q8N148 313 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 ZNF687Q8N1G0 1237 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 NANOGP1Q8N7R0 232 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 HSD17B11Q8NBQ5 300 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 OR52H1Q8NGJ2 320 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 FAM131CQ96AQ9 280 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 ATF6BQ99941 703 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 ATG10Q9H0Y0 220 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 TMEM38AQ9H6F2 299 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 SLC2A9Q9NRM0 540 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 MYRFQ9Y2G1 1151 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 RAP2CQ9Y3L5 183 aa5.97□□□□□ -1.45
SMG1-217ENST00000569764 NUP210Q8TEM1 1887 aaPredicted RBP5.97□□□□□ -1.45
SMG1-217ENST00000569764 MAGEB17A8MXT2 336 aa5.96□□□□□ -1.45
SMG1-217ENST00000569764 RAMP3O60896 148 aa5.96□□□□□ -1.45
SMG1-217ENST00000569764 SULT1C4O75897 302 aa5.96□□□□□ -1.45
SMG1-217ENST00000569764 CLDN14O95500 239 aa5.96□□□□□ -1.45
SMG1-217ENST00000569764 MRPS11P82912 194 aaKnown RBP5.96□□□□□ -1.45
SMG1-217ENST00000569764 TPBGQ13641 420 aa5.96□□□□□ -1.45
SMG1-217ENST00000569764 C1DQ13901 141 aaKnown RBP5.96□□□□□ -1.45
SMG1-217ENST00000569764 NKG7Q16617 165 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms