RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 PLA2G10O15496 165 aa6.51□□□□□ -1.37
CNOT1-216ENST00000569240 UBE2G2P60604 165 aa6.51□□□□□ -1.37
CNOT1-216ENST00000569240 AKR1C1Q04828 323 aa6.51□□□□□ -1.37
CNOT1-216ENST00000569240 CTSL3PQ5NE16 218 aa6.51□□□□□ -1.37
CNOT1-216ENST00000569240 GPR137CQ8N3F9 429 aa6.51□□□□□ -1.37
CNOT1-216ENST00000569240 CHST8Q9H2A9 424 aa6.51□□□□□ -1.37
CNOT1-216ENST00000569240 LHX3Q9UBR4 397 aa6.51□□□□□ -1.37
CNOT1-216ENST00000569240 TNFSF18Q9UNG2 199 aa6.51□□□□□ -1.37
CNOT1-216ENST00000569240 HEPACAM2A8MVW5 462 aa6.51□□□□□ -1.37
CNOT1-216ENST00000569240 C11orf98E9PRG8 122 aa6.51□□□□□ -1.37
CNOT1-216ENST00000569240 EIF4E2O60573 245 aaKnown RBP6.51□□□□□ -1.37
CNOT1-216ENST00000569240 C8orf89P0DMQ9 161 aa6.51□□□□□ -1.37
CNOT1-216ENST00000569240 FCARP24071 287 aa6.51□□□□□ -1.37
CNOT1-216ENST00000569240 KRTDAPP60985 99 aa6.51□□□□□ -1.37
CNOT1-216ENST00000569240 FZD2Q14332 565 aa6.51□□□□□ -1.37
CNOT1-216ENST00000569240 SSX1Q16384 188 aa6.51□□□□□ -1.37
CNOT1-216ENST00000569240 MPV17LQ2QL34 196 aa6.51□□□□□ -1.37
CNOT1-216ENST00000569240 BSXQ3C1V8 233 aa6.51□□□□□ -1.37
CNOT1-216ENST00000569240 Q6ZVL8 140 aa6.51□□□□□ -1.37
CNOT1-216ENST00000569240 OR4D6Q8NGJ1 314 aa6.51□□□□□ -1.37
CNOT1-216ENST00000569240 SH3RF2Q8TEC5 729 aa6.51□□□□□ -1.37
CNOT1-216ENST00000569240 FAM122AQ96E09 287 aa6.51□□□□□ -1.37
CNOT1-216ENST00000569240 KLRG1Q96E93 195 aa6.51□□□□□ -1.37
CNOT1-216ENST00000569240 GJD4Q96KN9 370 aaPredicted RBP6.51□□□□□ -1.37
CNOT1-216ENST00000569240 P2RX4Q99571 388 aa6.51□□□□□ -1.37
CNOT1-216ENST00000569240 LIN7CQ9NUP9 197 aaKnown RBP6.51□□□□□ -1.37
CNOT1-216ENST00000569240 C9J4A7 227 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 SIAH2O43255 324 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 ACAA1P09110 424 aaPredicted RBP6.5□□□□□ -1.37
CNOT1-216ENST00000569240 OR3A1P47881 315 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 NFATC4Q14934 902 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 SLC22A6Q4U2R8 563 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 PDZD11Q5EBL8 140 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 IL22RA1Q8N6P7 574 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 ACOT4Q8N9L9 421 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 TIMM29Q9BSF4 260 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 PPP1R3EQ9H7J1 279 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 SLC2A4RGQ9NR83 387 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 CD3DP04234 171 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 FBXO45P0C2W1 286 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 ZNF28P17035 718 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 DHRS2Q13268 280 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 KCNAB1Q14722 419 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 OR5B3Q8NH48 314 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 OR5R1Q8NH85 324 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 HINT3Q9NQE9 182 aaKnown RBP6.5□□□□□ -1.37
CNOT1-216ENST00000569240 SERTAD3Q9UJW9 196 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 TRAPPC2LH3BP13 241 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 CPMP14384 443 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 CCNOP22674 350 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 HOXC5Q00444 222 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 PLGLAQ15195 96 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 SFRP5Q5T4F7 317 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 DTD2Q96FN9 168 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 RNF2Q99496 336 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 RNF19AQ9NV58 838 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 RALYQ9UKM9 306 aaKnown RBP6.5□□□□□ -1.37
CNOT1-216ENST00000569240 SETD1BQ9UPS6 1966 aaKnown RBP6.5□□□□□ -1.37
CNOT1-216ENST00000569240 A6NIN4 97 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 M0QZQ0 153 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 ARPC3O15145 178 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 OPN1LWP04000 364 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 GAB1Q13480 694 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 ISXQ2M1V0 245 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 ZNF528Q3MIS6 628 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 OTOP2Q7RTS6 562 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 OR10P1Q8NGE3 313 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 OR5M1Q8NGP8 315 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 NXPE3Q969Y0 559 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 SOCS6O14544 535 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 HPP00738 406 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 HBQ1P09105 142 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 FOLR2P14207 255 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 CD1CP29017 333 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 OR1D4P47884 311 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 ELAVL3Q14576 367 aaKnown RBP6.5□□□□□ -1.37
CNOT1-216ENST00000569240 MRGPRGQ86SM5 289 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 C2orf73Q8N5S3 287 aaPredicted RBP6.5□□□□□ -1.37
CNOT1-216ENST00000569240 OR52R1Q8NGF1 315 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 OR4F5Q8NH21 305 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 HMGB4Q8WW32 186 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 NEIL1Q96FI4 390 aaPredicted RBP6.5□□□□□ -1.37
CNOT1-216ENST00000569240 OR5B2Q96R09 309 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 OR4F4Q96R69 305 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 FAAP24Q9BTP7 215 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 MS4A8Q9BY19 250 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 PBX4Q9BYU1 374 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 CALHM2Q9HA72 323 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 SLC25A37Q9NYZ2 338 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 B4GALT7Q9UBV7 327 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 ZNF391Q9UJN7 358 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 A0A087WUU8 490 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 CHEK1O14757 476 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 ACTL6BO94805 426 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 GNB3P16520 340 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 SUCLG1P53597 346 aaKnown RBP6.5□□□□□ -1.37
CNOT1-216ENST00000569240 DGAT2L6Q6ZPD8 337 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 SAMD7Q7Z3H4 446 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 ABI3BPQ7Z7G0 1075 aa6.5□□□□□ -1.37
CNOT1-216ENST00000569240 ACVR1CQ8NER5 493 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms