RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 RBBP4Q09028 425 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 CAMK2DQ13557 499 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 GNA13Q14344 377 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 TAF9Q16594 264 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 CCDC153Q494R4 210 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 XKR7Q5GH72 579 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 FIP1L1Q6UN15 594 aaKnown RBP4.7□□□□□ -1.66
CDH13-211ENST00000568770 ZNF836Q6ZNA1 936 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 C9orf139Q6ZV77 190 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 ANKRD46Q86W74 232 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 RNF130Q86XS8 419 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 SKA3Q8IX90 412 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 C20orf196Q8IYI0 205 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 CCDC63Q8NA47 563 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 FNDC5Q8NAU1 212 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 NOA1Q8NC60 698 aaKnown RBP4.7□□□□□ -1.66
CDH13-211ENST00000568770 ICA1LQ8NDH6 482 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 SLC30A7Q8NEW0 376 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 OR52E2Q8NGJ4 325 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 FGFBP3Q8TAT2 258 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 ZNF519Q8TB69 540 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 AGR3Q8TD06 166 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 IFT81Q8WYA0 676 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 C11orf40Q8WZ69 217 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 NEURL3Q96EH8 262 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 ELMOD3Q96FG2 381 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 TRNT1Q96Q11 434 aaKnown RBP4.7□□□□□ -1.66
CDH13-211ENST00000568770 FMO2Q99518 471 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 SLC35A5Q9BS91 424 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 EMC6Q9BV81 110 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 TM2D2Q9BX73 214 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 RSPO3Q9BXY4 272 aaPredicted RBP4.7□□□□□ -1.66
CDH13-211ENST00000568770 DPY30Q9C005 99 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 NUAK2Q9H093 628 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 SLC38A1Q9H2H9 487 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 MTHFD2LQ9H903 347 aaPredicted RBP4.7□□□□□ -1.66
CDH13-211ENST00000568770 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.7□□□□□ -1.66
CDH13-211ENST00000568770 C1RLQ9NZP8 487 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 MARCOQ9UEW3 520 aaPredicted RBP4.7□□□□□ -1.66
CDH13-211ENST00000568770 POFUT2Q9Y2G5 429 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 INSIG2Q9Y5U4 225 aa4.7□□□□□ -1.66
CDH13-211ENST00000568770 FAM90A20PA6NIJ5 464 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 SRRM5B3KS81 715 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 MS4A18H0YCH9 400 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 AIM2O14862 343 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 SPRY3O43610 288 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 NDUFA7O95182 113 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 CPSF4O95639 269 aaKnown RBP4.69□□□□□ -1.66
CDH13-211ENST00000568770 HPRP00739 348 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 IGHV1-46P01743 117 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 IGHV3-13P01766 116 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 IGHV2-70P01814 119 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 SBK2P0C263 348 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 HLA-DOBP13765 273 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 NCF2P19878 526 aaPredicted RBP4.69□□□□□ -1.66
CDH13-211ENST00000568770 CBLP22681 906 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 GRPRP30550 384 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 CD80P33681 288 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 CHI3L1P36222 383 aaPredicted RBP4.69□□□□□ -1.66
CDH13-211ENST00000568770 ZNF81P51508 661 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 UCP2P55851 309 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 CLDN8P56748 225 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 EGR4Q05215 589 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 PAX8Q06710 450 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 SLC3A1Q07837 685 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 PCLAFQ15004 111 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 DEFB112Q30KQ8 113 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 MS4A18Q3C1V0 323 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 SPRNQ5BIV9 151 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 BRD3OSQ6XYD6 125 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 LRRC74BQ6ZQY2 392 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 H1FNTQ75WM6 255 aaPredicted RBP4.69□□□□□ -1.66
CDH13-211ENST00000568770 VRK2Q86Y07 508 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 C10orf107Q8IVU9 208 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 UEVLDQ8IX04 471 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 ZNF440Q8IYI8 595 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 SLC22A24Q8N4F4 322 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 OR8J2Q8NGG1 315 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 PNPT1Q8TCS8 783 aaKnown RBP4.69□□□□□ -1.66
CDH13-211ENST00000568770 GEMIN6Q8WXD5 167 aaKnown RBP4.69□□□□□ -1.66
CDH13-211ENST00000568770 TAAR8Q969N4 342 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 TXNDC15Q96J42 360 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 LRR1Q96L50 414 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 SH3GL3Q99963 347 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 ULBP2Q9BZM5 246 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 CHIAQ9BZP6 476 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 BCL2L14Q9BZR8 327 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 MARCH7Q9H992 704 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 B3GAT2Q9NPZ5 323 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 DCAF16Q9NXF7 216 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 PSMC3IPQ9P2W1 217 aaPredicted RBP4.69□□□□□ -1.66
CDH13-211ENST00000568770 FBXL3Q9UKT7 428 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 NPTNQ9Y639 398 aa4.69□□□□□ -1.66
CDH13-211ENST00000568770 TRAV40A0A0B4J280 105 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 LOC102725191A0A1B0GVB3 256 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 PRSS51A0A1B0GVH4 220 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 PLSCR5A0PG75 271 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 TM9SF1O15321 606 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 OR2T1O43869 369 aa4.68□□□□□ -1.66
CDH13-211ENST00000568770 CLPXO76031 633 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms