RNA–Protein interactions for RNA: ENST00000568329.5

CSK-211, Transcript of C-terminal Src kinase, human

TSL 5

Gene CSK, Length 1,552 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSK-211	ENST00000568329	RPS25	P62851	125 aa	Known RBP	13.54	□□□□□ -0.24
CSK-211	ENST00000568329	HIST1H3A	P68431	136 aa		13.54	□□□□□ -0.24
CSK-211	ENST00000568329	TGFBR3	Q03167	851 aa		13.54	□□□□□ -0.24
CSK-211	ENST00000568329	SLC3A1	Q07837	685 aa		13.54	□□□□□ -0.24
CSK-211	ENST00000568329	TAF13	Q15543	124 aa		13.54	□□□□□ -0.24
CSK-211	ENST00000568329	YIF1B	Q5BJH7	314 aa		13.54	□□□□□ -0.24
CSK-211	ENST00000568329	HIST2H3PS2	Q5TEC6	136 aa		13.54	□□□□□ -0.24
CSK-211	ENST00000568329	OTP	Q5XKR4	325 aa		13.54	□□□□□ -0.24
CSK-211	ENST00000568329	OR7E24	Q6IFN5	339 aa		13.54	□□□□□ -0.24
CSK-211	ENST00000568329	PAMR1	Q6UXH9	720 aa		13.54	□□□□□ -0.24
CSK-211	ENST00000568329	SEM1	Q6ZVN7	128 aa		13.54	□□□□□ -0.24
CSK-211	ENST00000568329	HIST2H3A	Q71DI3	136 aa		13.54	□□□□□ -0.24
CSK-211	ENST00000568329	DOLPP1	Q86YN1	238 aa		13.54	□□□□□ -0.24
CSK-211	ENST00000568329	OR2G2	Q8NGZ5	317 aa		13.54	□□□□□ -0.24
CSK-211	ENST00000568329	GHSR	Q92847	366 aa		13.54	□□□□□ -0.24
CSK-211	ENST00000568329	RPL3L	Q92901	407 aa	Known RBP	13.54	□□□□□ -0.24
CSK-211	ENST00000568329	TMEM203	Q969S6	136 aa		13.54	□□□□□ -0.24
CSK-211	ENST00000568329	TMED9	Q9BVK6	235 aa		13.54	□□□□□ -0.24
CSK-211	ENST00000568329	COMMD4	Q9H0A8	199 aa		13.54	□□□□□ -0.24
CSK-211	ENST00000568329	HDHD2	Q9H0R4	259 aa		13.54	□□□□□ -0.24
CSK-211	ENST00000568329	C12orf49	Q9H741	205 aa		13.54	□□□□□ -0.24
CSK-211	ENST00000568329	MOB1A	Q9H8S9	216 aa		13.54	□□□□□ -0.24
CSK-211	ENST00000568329	GRIP1	Q9Y3R0	1128 aa		13.54	□□□□□ -0.24
CSK-211	ENST00000568329	SIRT4	Q9Y6E7	314 aa	Predicted RBP	13.54	□□□□□ -0.24
CSK-211	ENST00000568329	PRRC2C	Q9Y520	2896 aa	Known RBP	13.53	□□□□□ -0.24
CSK-211	ENST00000568329	SVIL	O95425	2214 aa		13.53	□□□□□ -0.24
CSK-211	ENST00000568329	SPTA1	P02549	2419 aa		13.53	□□□□□ -0.24
CSK-211	ENST00000568329	IL2RA	P01589	272 aa		13.53	□□□□□ -0.24
CSK-211	ENST00000568329	IGHV3-9	P01782	118 aa		13.53	□□□□□ -0.24
CSK-211	ENST00000568329	B4GALT1	P15291	398 aa		13.53	□□□□□ -0.24
CSK-211	ENST00000568329	HSD11B1	P28845	292 aa		13.53	□□□□□ -0.24
CSK-211	ENST00000568329	PSMB10	P40306	273 aa		13.53	□□□□□ -0.24
CSK-211	ENST00000568329	MMP16	P51512	607 aa		13.53	□□□□□ -0.24
CSK-211	ENST00000568329	NCS1	P62166	190 aa		13.53	□□□□□ -0.24
CSK-211	ENST00000568329	LSM3	P62310	102 aa	Known RBP	13.53	□□□□□ -0.24
CSK-211	ENST00000568329	GTF3C1	Q12789	2109 aa		13.53	□□□□□ -0.24
CSK-211	ENST00000568329	FAP	Q12884	760 aa		13.53	□□□□□ -0.24
CSK-211	ENST00000568329	ECH1	Q13011	328 aa		13.53	□□□□□ -0.24
CSK-211	ENST00000568329	TFAP2E	Q6VUC0	442 aa		13.53	□□□□□ -0.24
CSK-211	ENST00000568329	CFAP77	Q6ZQR2	320 aa		13.53	□□□□□ -0.24
CSK-211	ENST00000568329	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	13.53	□□□□□ -0.24
CSK-211	ENST00000568329	GCNT2	Q8N0V5	402 aa		13.53	□□□□□ -0.24
CSK-211	ENST00000568329	LRRC18	Q8N456	261 aa		13.53	□□□□□ -0.24
CSK-211	ENST00000568329	PHYHIP	Q92561	330 aa		13.53	□□□□□ -0.24
CSK-211	ENST00000568329	KCTD7	Q96MP8	289 aa		13.53	□□□□□ -0.24
CSK-211	ENST00000568329	CENPO	Q9BU64	300 aa		13.53	□□□□□ -0.24
CSK-211	ENST00000568329	ZNF281	Q9Y2X9	895 aa		13.53	□□□□□ -0.24
CSK-211	ENST00000568329		R4GMQ9	66 aa		13.53	□□□□□ -0.24
CSK-211	ENST00000568329	NBEA	Q8NFP9	2946 aa		13.53	□□□□□ -0.24
CSK-211	ENST00000568329		A0A1W2PPW3	197 aa		13.52	□□□□□ -0.25
CSK-211	ENST00000568329	LOC110117498-PIK3R3	F6TDL0	507 aa		13.52	□□□□□ -0.25
CSK-211	ENST00000568329	RER1	O15258	196 aa		13.52	□□□□□ -0.25
CSK-211	ENST00000568329	GATB	O75879	557 aa	Known RBP	13.52	□□□□□ -0.25
CSK-211	ENST00000568329	CTSS	P25774	331 aa		13.52	□□□□□ -0.25
CSK-211	ENST00000568329	KIR2DL2	P43627	348 aa	Predicted RBP	13.52	□□□□□ -0.25
CSK-211	ENST00000568329	FABP5	Q01469	135 aa		13.52	□□□□□ -0.25
CSK-211	ENST00000568329	RAB35	Q15286	201 aa		13.52	□□□□□ -0.25
CSK-211	ENST00000568329	SLC36A2	Q495M3	483 aa		13.52	□□□□□ -0.25
CSK-211	ENST00000568329	ELFN2	Q5R3F8	820 aa		13.52	□□□□□ -0.25
CSK-211	ENST00000568329		Q6ZT83	130 aa		13.52	□□□□□ -0.25
CSK-211	ENST00000568329	SLC16A14	Q7RTX9	510 aa		13.52	□□□□□ -0.25
CSK-211	ENST00000568329	CNEP1R1	Q8N9A8	125 aa		13.52	□□□□□ -0.25
CSK-211	ENST00000568329	OR5AK2	Q8NH90	309 aa		13.52	□□□□□ -0.25
CSK-211	ENST00000568329	C4orf45	Q96LM5	186 aa		13.52	□□□□□ -0.25
CSK-211	ENST00000568329	ATF6B	Q99941	703 aa		13.52	□□□□□ -0.25
CSK-211	ENST00000568329	PNRC2	Q9NPJ4	139 aa	Known RBP	13.52	□□□□□ -0.25
CSK-211	ENST00000568329	TXNL4B	Q9NX01	149 aa	Known RBP	13.52	□□□□□ -0.25
CSK-211	ENST00000568329	FRRS1L	Q9P0K9	344 aa		13.52	□□□□□ -0.25
CSK-211	ENST00000568329	TIMM10B	Q9Y5J6	103 aa		13.52	□□□□□ -0.25
CSK-211	ENST00000568329	GABRP	O00591	440 aa		13.51	□□□□□ -0.25
CSK-211	ENST00000568329	TOX	O94900	526 aa		13.51	□□□□□ -0.25
CSK-211	ENST00000568329	NANOS3	P60323	173 aa	Known RBP	13.51	□□□□□ -0.25
CSK-211	ENST00000568329	PSMA6	P60900	246 aa	Known RBP	13.51	□□□□□ -0.25
CSK-211	ENST00000568329	ARF1	P84077	181 aa	Known RBP	13.51	□□□□□ -0.25
CSK-211	ENST00000568329	SPCS2	Q15005	226 aa		13.51	□□□□□ -0.25
CSK-211	ENST00000568329	ANKRD16	Q6P6B7	361 aa		13.51	□□□□□ -0.25
CSK-211	ENST00000568329	SPATC1	Q76KD6	591 aa		13.51	□□□□□ -0.25
CSK-211	ENST00000568329	CCDC36	Q8IYA8	594 aa		13.51	□□□□□ -0.25
CSK-211	ENST00000568329	RPRML	Q8N4K4	120 aa		13.51	□□□□□ -0.25
CSK-211	ENST00000568329	OR10S1	Q8NGN2	331 aa		13.51	□□□□□ -0.25
CSK-211	ENST00000568329	NANOS1	Q8WY41	292 aa	Known RBP	13.51	□□□□□ -0.25
CSK-211	ENST00000568329	RNF166	Q96A37	237 aa	Predicted RBP	13.51	□□□□□ -0.25
CSK-211	ENST00000568329	FBXO17	Q96EF6	278 aa		13.51	□□□□□ -0.25
CSK-211	ENST00000568329	KCNJ15	Q99712	375 aa		13.51	□□□□□ -0.25
CSK-211	ENST00000568329	DCSTAMP	Q9H295	470 aa		13.51	□□□□□ -0.25
CSK-211	ENST00000568329	PLSCR4	Q9NRQ2	329 aa		13.51	□□□□□ -0.25
CSK-211	ENST00000568329	PLEK2	Q9NYT0	353 aa		13.51	□□□□□ -0.25
CSK-211	ENST00000568329	PRSS50	Q9UI38	385 aa		13.51	□□□□□ -0.25
CSK-211	ENST00000568329	ATPIF1	Q9UII2	106 aa		13.51	□□□□□ -0.25
CSK-211	ENST00000568329	TINAG	Q9UJW2	476 aa		13.51	□□□□□ -0.25
CSK-211	ENST00000568329	SHANK1	Q9Y566	2161 aa		13.51	□□□□□ -0.25
CSK-211	ENST00000568329	MED12L	Q86YW9	2145 aa		13.51	□□□□□ -0.25
CSK-211	ENST00000568329	TMEM269	A0A1B0GVZ9	245 aa		13.5	□□□□□ -0.25
CSK-211	ENST00000568329	ACOD1	A6NK06	481 aa		13.5	□□□□□ -0.25
CSK-211	ENST00000568329	OR4C45	A6NMZ5	311 aa		13.5	□□□□□ -0.25
CSK-211	ENST00000568329	SGCE	O43556	437 aa		13.5	□□□□□ -0.25
CSK-211	ENST00000568329	SC5D	O75845	299 aa		13.5	□□□□□ -0.25
CSK-211	ENST00000568329	ARL6IP5	O75915	188 aa		13.5	□□□□□ -0.25
CSK-211	ENST00000568329	ZFPL1	O95159	310 aa		13.5	□□□□□ -0.25
CSK-211	ENST00000568329	WNT11	O96014	354 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms