RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 MAT1AQ00266 395 aaKnown RBP6.86□□□□□ -1.31
ATXN3-250ENST00000568290 NAAAQ02083 359 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 TLE3Q04726 772 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 EGR4Q05215 589 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 PMPCAQ10713 525 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 SURF2Q15527 256 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-250ENST00000568290 NNATQ16517 81 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 ARSJQ5FYB0 599 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-250ENST00000568290 NKAPLQ5M9Q1 402 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 GLYATL3Q5SZD4 288 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 NSUN5P2Q63ZY6 315 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 RGS7BPQ6MZT1 257 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-250ENST00000568290 C11orf87Q6NUJ2 197 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 LRFN4Q6PJG9 635 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 LRRC69Q6ZNQ3 347 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 LYG2Q86SG7 212 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 SYT9Q86SS6 491 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 SLC25A42Q86VD7 318 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 SPAG16Q8N0X2 631 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 D2HGDHQ8N465 521 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 KCNRGQ8N5I3 272 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 RFLNBQ8N5W9 214 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 GATSQ8NAP1 163 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 STEAP2Q8NFT2 490 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 OR56B1Q8NGI3 324 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 GPR119Q8TDV5 335 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 PATE1Q8WXA2 126 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 CLIP3Q96DZ5 547 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 SEH1LQ96EE3 360 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 SHDQ96IW2 340 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 NECAB3Q96P71 396 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-250ENST00000568290 S100A13Q99584 98 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 GFI1Q99684 422 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 SMAD5Q99717 465 aaKnown RBP6.86□□□□□ -1.31
ATXN3-250ENST00000568290 ABHD6Q9BV23 337 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 EDEM2Q9BV94 578 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 NUDT9Q9BW91 350 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 TGIF2Q9GZN2 237 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 CST11Q9H112 138 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 CHRDQ9H2X0 955 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 POFUT1Q9H488 388 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 LDAHQ9H6V9 325 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 PTGES2Q9H7Z7 377 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 CERS4Q9HA82 394 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 BEX1Q9HBH7 125 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 CHST11Q9NPF2 352 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 C12orf4Q9NQ89 552 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 LANCL2Q9NS86 450 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 PIPOXQ9P0Z9 390 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 DTX4Q9Y2E6 619 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 POLR1DQ9Y2S0 133 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 LRP12Q9Y561 859 aa6.86□□□□□ -1.31
ATXN3-250ENST00000568290 A0A087WZY1 265 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 LOC107986453A0A1B0GWG9 222 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 A0A1W2PNV4 684 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 CIB4A0PJX0 185 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 CDC14CA4D256 554 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 OR5H14A6NHG9 310 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 OR2AT4A6NND4 320 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 FAM171A2A8MVW0 826 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 ZNF878C9JN71 531 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 PSMD9O00233 223 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 TP53I11O14683 189 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 CA11O75493 328 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 MTRF1O75570 445 aaKnown RBP6.85□□□□□ -1.31
ATXN3-250ENST00000568290 DUS4LO95620 317 aaKnown RBP6.85□□□□□ -1.31
ATXN3-250ENST00000568290 DDAH2O95865 285 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 HLA-AP01891 365 aaKnown RBP6.85□□□□□ -1.31
ATXN3-250ENST00000568290 CD63P08962 238 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 FGF2P09038 288 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 NAT2P11245 290 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 PNLIPP16233 465 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 GLB1P16278 677 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 ABCD3P28288 659 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 KIR3DL2P43630 455 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 CXADRP78310 365 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 IL13RA1P78552 427 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 C1orf61Q13536 156 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 SMCO1Q147U7 214 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 TSC22D1Q15714 1073 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 CDNFQ49AH0 187 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 PAN3Q58A45 887 aaKnown RBP6.85□□□□□ -1.31
ATXN3-250ENST00000568290 NKAIN2Q5VXU1 208 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 OR5M10Q6IEU7 315 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 OR7E24Q6IFN5 339 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 WDR74Q6RFH5 385 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-250ENST00000568290 CBLN3Q6UW01 205 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 SLC35D2Q76EJ3 337 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 KANSL1Q7Z3B3 1105 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 UEVLDQ8IX04 471 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 MUC20Q8N307 709 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-250ENST00000568290 KDM8Q8N371 416 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 PRSS35Q8N3Z0 413 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 GALNT16Q8N428 558 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 BVESQ8NE79 360 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 DOK4Q8TEW6 326 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 RNF141Q8WVD5 230 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 RNF133Q8WVZ7 376 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 C8orf44Q96CB5 159 aa6.85□□□□□ -1.31
ATXN3-250ENST00000568290 INTS12Q96CB8 462 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms