RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 G0S2P27469 103 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 TACR3P29371 465 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 TAGLN2P37802 199 aaKnown RBP9.88□□□□□ -0.83
PALB2-206ENST00000568219 EIF2S3P41091 472 aaKnown RBP9.88□□□□□ -0.83
PALB2-206ENST00000568219 DEFB103AP81534 67 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 EFNB1P98172 346 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 CLEC12BQ2HXU8 276 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 WDR38Q5JTN6 314 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 TMEM31Q5JXX7 168 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 LPCAT3Q6P1A2 487 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 OR2L13Q8N349 312 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 OR51A2Q8NGJ7 313 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 ZNRF4Q8WWF5 429 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 CRLF2Q9HC73 371 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 TNFSF18Q9UNG2 199 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 C19orf53Q9UNZ5 99 aaPredicted RBP9.88□□□□□ -0.83
PALB2-206ENST00000568219 HEATR5BQ9P2D3 2071 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 CABIN1Q9Y6J0 2220 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 TMEM272A0A1B0GTI8 110 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 A0A1W2PPE2 198 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 STMND1H3BQB6 276 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 HOXC8P31273 242 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 AFF3P51826 1226 aaKnown RBP9.88□□□□□ -0.83
PALB2-206ENST00000568219 JMJD6Q6NYC1 403 aaPredicted RBP9.88□□□□□ -0.83
PALB2-206ENST00000568219 FBXO42Q6P3S6 717 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 TMEM184AQ6ZMB5 413 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 OR51T1Q8NGJ9 327 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 ZFYVE21Q9BQ24 234 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 NRSN2Q9GZP1 204 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 SFXN1Q9H9B4 322 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 UNKLQ9H9P5 680 aaKnown RBP9.88□□□□□ -0.83
PALB2-206ENST00000568219 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.88□□□□□ -0.83
PALB2-206ENST00000568219 KCNIP3Q9Y2W7 256 aa9.88□□□□□ -0.83
PALB2-206ENST00000568219 E9PQ18 207 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 CYTIPO60759 359 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 SLC34A2O95436 690 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 GP1BBP13224 206 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 LAP3P28838 519 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 VAMP2P63027 116 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 ADGRE4PQ86SQ3 457 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 SLC39A11Q8N1S5 342 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 MFSD9Q8NBP5 474 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 ADAD2Q8NCV1 583 aaKnown RBP9.87□□□□□ -0.83
PALB2-206ENST00000568219 OR5AP2Q8NGF4 316 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 NUDT22Q9BRQ3 303 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 VN1R3Q9BXE9 311 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 FAM212BQ9NTI7 297 aaPredicted RBP9.87□□□□□ -0.83
PALB2-206ENST00000568219 MAFFQ9ULX9 164 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 AUP1Q9Y679 476 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 UNC13CQ8NB66 2214 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 C9orf170A2RU37 121 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 MPTX1A8MV57 137 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 XRCC2O43543 280 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 DIRAS3O95661 229 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 RCC1P18754 421 aaPredicted RBP9.87□□□□□ -0.83
PALB2-206ENST00000568219 FCGR2CP31995 323 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 ALDH3B1P43353 468 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 RAB32Q13637 225 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 MLC1Q15049 377 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 MPPED2Q15777 294 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 HAGHQ16775 308 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 AWAT1Q58HT5 328 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 CYB5R2Q6BCY4 276 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 CPEB2Q7Z5Q1 589 aaKnown RBP9.87□□□□□ -0.83
PALB2-206ENST00000568219 OR9K2Q8NGE7 335 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 SEH1LQ96EE3 360 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 OR2M4Q96R27 311 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 POLMQ9NP87 494 aaPredicted RBP9.87□□□□□ -0.83
PALB2-206ENST00000568219 SLC2A4RGQ9NR83 387 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 MMP26Q9NRE1 261 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 LUZP4Q9P127 313 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 KLHDC2Q9Y2U9 406 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 HEBP2Q9Y5Z4 205 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 A0A0G2JMZ2 1700 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 LRRC37A2A6NM11 1700 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 C7orf77A4D0Y5 90 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 ZIC2O95409 532 aaPredicted RBP9.87□□□□□ -0.83
PALB2-206ENST00000568219 RNF224P0DH78 156 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 SMIM6P0DI80 62 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 MOB3CQ70IA8 216 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 ABHD12BQ7Z5M8 362 aaPredicted RBP9.87□□□□□ -0.83
PALB2-206ENST00000568219 SUMF1Q8NBK3 374 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 SLC30A7Q8NEW0 376 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 THRSPQ92748 146 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 LAT2Q9GZY6 243 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 DUSP22Q9NRW4 184 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 HIF3AQ9Y2N7 669 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 KPTNQ9Y664 436 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 RNF215Q9Y6U7 377 aa9.87□□□□□ -0.83
PALB2-206ENST00000568219 BRCA1P38398 1863 aaKnown RBP9.87□□□□□ -0.83
PALB2-206ENST00000568219 C4orf51C9J302 202 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 H3BML4 177 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 SLC17A2O00624 439 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 NXPH3O95157 252 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 TBX6O95947 436 aaPredicted RBP9.86□□□□□ -0.83
PALB2-206ENST00000568219 ABOP16442 354 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 EEF1A1P68104 462 aaKnown RBP9.86□□□□□ -0.83
PALB2-206ENST00000568219 GLO1Q04760 184 aa9.86□□□□□ -0.83
PALB2-206ENST00000568219 RPL18Q07020 188 aaKnown RBP9.86□□□□□ -0.83
PALB2-206ENST00000568219 NKAIN2Q5VXU1 208 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms