RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 RACGAP1Q9H0H5 632 aa5.9□□□□□ -1.46
SF3B3-209ENST00000567635 SYT4Q9H2B2 425 aa5.9□□□□□ -1.46
SF3B3-209ENST00000567635 MMADHCQ9H3L0 296 aaPredicted RBP5.9□□□□□ -1.46
SF3B3-209ENST00000567635 SRA1Q9HD15 236 aaKnown RBP5.9□□□□□ -1.46
SF3B3-209ENST00000567635 TUBG2Q9NRH3 451 aa5.9□□□□□ -1.46
SF3B3-209ENST00000567635 CYSLTR2Q9NS75 346 aa5.9□□□□□ -1.46
SF3B3-209ENST00000567635 ZNF275Q9NSD4 429 aaPredicted RBP5.9□□□□□ -1.46
SF3B3-209ENST00000567635 VSX1Q9NZR4 365 aaPredicted RBP5.9□□□□□ -1.46
SF3B3-209ENST00000567635 ACTR3BQ9P1U1 418 aa5.9□□□□□ -1.46
SF3B3-209ENST00000567635 KLHL21Q9UJP4 597 aa5.9□□□□□ -1.46
SF3B3-209ENST00000567635 NDRG4Q9ULP0 352 aaKnown RBP5.9□□□□□ -1.46
SF3B3-209ENST00000567635 COA3Q9Y2R0 106 aaPredicted RBP5.9□□□□□ -1.46
SF3B3-209ENST00000567635 GRIP1Q9Y3R0 1128 aa5.9□□□□□ -1.46
SF3B3-209ENST00000567635 IGHV1-69-2A0A0G2JMI3 117 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 B4DSR2 109 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 ARPC3O15145 178 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 SPRY3O43610 288 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 OR10H3O60404 316 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 DOK2O60496 412 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 CDC14BO60729 498 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 RP2O75695 350 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 PPP1R3DO95685 299 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 ABHD16AO95870 558 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 RENP00797 406 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 SRD5A1P18405 259 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 GSTM3P21266 225 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 IGFBP5P24593 272 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 FPR3P25089 353 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 NOS3P29474 1203 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 CRABP1P29762 137 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 RRM2P31350 389 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 SLC6A6P31641 620 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 THBS2P35442 1172 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 HTR5AP47898 357 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 GSSP48637 474 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 CENPAP49450 140 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 MMP15P51511 669 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 CDH15P55291 814 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 ELF3P78545 371 aaPredicted RBP5.89□□□□□ -1.47
SF3B3-209ENST00000567635 GLO1Q04760 184 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 DYNC1I2Q13409 638 aaKnown RBP5.89□□□□□ -1.47
SF3B3-209ENST00000567635 AQP6Q13520 282 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 CCNIQ14094 377 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 TSTQ16762 297 aaKnown RBP5.89□□□□□ -1.47
SF3B3-209ENST00000567635 CR1LQ2VPA4 569 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 HFEQ30201 348 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 DNAL1Q4LDG9 190 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 FAM209AQ5JX71 171 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 C1orf94Q6P1W5 598 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 DNM1P34Q6PK57 102 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 CYP2R1Q6VVX0 501 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 PTCHD4Q6ZW05 846 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 USP51Q70EK9 711 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 CXXC5Q7LFL8 322 aaKnown RBP5.89□□□□□ -1.47
SF3B3-209ENST00000567635 JAZF1Q86VZ6 243 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 ARHGAP24Q8N264 748 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 LINC00471Q8N535 108 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 NPEPL1Q8NDH3 523 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 OR1F12Q8NHA8 337 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 CLDND2Q8NHS1 167 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 SPATA3Q8NHX4 192 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 FANK1Q8TC84 345 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 IPCEF1Q8WWN9 437 aaPredicted RBP5.89□□□□□ -1.47
SF3B3-209ENST00000567635 GTF3AQ92664 365 aaKnown RBP5.89□□□□□ -1.47
SF3B3-209ENST00000567635 PTP4A1Q93096 173 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 POP5Q969H6 163 aaKnown RBP5.89□□□□□ -1.47
SF3B3-209ENST00000567635 UTP4Q969X6 686 aaKnown RBP5.89□□□□□ -1.47
SF3B3-209ENST00000567635 HAVCR1Q96D42 359 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 SAMD8Q96LT4 415 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 COG8Q96MW5 612 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 DIRC2Q96SL1 478 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 IFT27Q9BW83 186 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 CADM1Q9BY67 442 aaKnown RBP5.89□□□□□ -1.47
SF3B3-209ENST00000567635 EGLN1Q9GZT9 426 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 OR52D1Q9H346 318 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 TBCCD1Q9NVR7 557 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 PLEK2Q9NYT0 353 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 TREM2Q9NZC2 230 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 TMEFF2Q9UIK5 374 aaPredicted RBP5.89□□□□□ -1.47
SF3B3-209ENST00000567635 ZDHHC8Q9ULC8 765 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 B9D1Q9UPM9 204 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 STARD10Q9Y365 291 aa5.89□□□□□ -1.47
SF3B3-209ENST00000567635 FBN1P35555 2871 aaKnown RBP5.89□□□□□ -1.47
SF3B3-209ENST00000567635 IGLV1-36A0A0B4J1U3 117 aa5.88□□□□□ -1.47
SF3B3-209ENST00000567635 OR6C6A6NF89 314 aa5.88□□□□□ -1.47
SF3B3-209ENST00000567635 RNF212BA8MTL3 300 aa5.88□□□□□ -1.47
SF3B3-209ENST00000567635 TNFRSF11BO00300 401 aa5.88□□□□□ -1.47
SF3B3-209ENST00000567635 DCTN6O00399 190 aa5.88□□□□□ -1.47
SF3B3-209ENST00000567635 WNT9BO14905 357 aa5.88□□□□□ -1.47
SF3B3-209ENST00000567635 RER1O15258 196 aa5.88□□□□□ -1.47
SF3B3-209ENST00000567635 TIMM8AO60220 97 aaPredicted RBP5.88□□□□□ -1.47
SF3B3-209ENST00000567635 IGHV1-46P01743 117 aa5.88□□□□□ -1.47
SF3B3-209ENST00000567635 TFP02787 698 aa5.88□□□□□ -1.47
SF3B3-209ENST00000567635 ADH4P08319 380 aa5.88□□□□□ -1.47
SF3B3-209ENST00000567635 ANPEPP15144 967 aa5.88□□□□□ -1.47
SF3B3-209ENST00000567635 HIST1H1CP16403 213 aaKnown RBP5.88□□□□□ -1.47
SF3B3-209ENST00000567635 KITLGP21583 273 aa5.88□□□□□ -1.47
SF3B3-209ENST00000567635 PCMT1P22061 227 aa5.88□□□□□ -1.47
SF3B3-209ENST00000567635 DVL1P1P54792 670 aaPredicted RBP5.88□□□□□ -1.47
SF3B3-209ENST00000567635 LMO4P61968 165 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms