RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 GABRR3A8MPY1 467 aa0.75□□□□□ -2.29
CDH1-211ENST00000567320 UGT2B4P06133 528 aa0.75□□□□□ -2.29
CDH1-211ENST00000567320 PABPC4LP0CB38 370 aaKnown RBP0.75□□□□□ -2.29
CDH1-211ENST00000567320 NCK1P16333 377 aa0.75□□□□□ -2.29
CDH1-211ENST00000567320 MAPK3P27361 379 aaPredicted RBP0.75□□□□□ -2.29
CDH1-211ENST00000567320 MXD1Q05195 221 aa0.75□□□□□ -2.29
CDH1-211ENST00000567320 TMEM69Q5SWH9 247 aa0.75□□□□□ -2.29
CDH1-211ENST00000567320 UQCC3Q6UW78 93 aa0.75□□□□□ -2.29
CDH1-211ENST00000567320 ZNF619Q8N2I2 560 aa0.75□□□□□ -2.29
CDH1-211ENST00000567320 STK40Q8N2I9 435 aa0.75□□□□□ -2.29
CDH1-211ENST00000567320 LRRC29Q8WV35 223 aa0.75□□□□□ -2.29
CDH1-211ENST00000567320 SENP8Q96LD8 212 aa0.75□□□□□ -2.29
CDH1-211ENST00000567320 IGF2BP2-AS1Q96M15 143 aa0.75□□□□□ -2.29
CDH1-211ENST00000567320 COPS8Q99627 209 aa0.75□□□□□ -2.29
CDH1-211ENST00000567320 AZI2Q9H6S1 392 aa0.75□□□□□ -2.29
CDH1-211ENST00000567320 NIPAL2Q9H841 368 aa0.75□□□□□ -2.29
CDH1-211ENST00000567320 DBNDD1Q9H9R9 158 aa0.75□□□□□ -2.29
CDH1-211ENST00000567320 NMRAL1Q9HBL8 299 aa0.75□□□□□ -2.29
CDH1-211ENST00000567320 SLC7A8Q9UHI5 535 aa0.75□□□□□ -2.29
CDH1-211ENST00000567320 THADAQ6YHU6 1953 aa0.75□□□□□ -2.29
CDH1-211ENST00000567320 FLG2Q5D862 2391 aaPredicted RBP0.75□□□□□ -2.29
CDH1-211ENST00000567320 CAMTA1Q9Y6Y1 1673 aa0.75□□□□□ -2.29
CDH1-211ENST00000567320 ZNF816-ZNF321PA0A0X1KG74 233 aa0.74□□□□□ -2.29
CDH1-211ENST00000567320 GOSR2O14653 212 aa0.74□□□□□ -2.29
CDH1-211ENST00000567320 ARPC3O15145 178 aa0.74□□□□□ -2.29
CDH1-211ENST00000567320 SURF6O75683 361 aaKnown RBP0.74□□□□□ -2.29
CDH1-211ENST00000567320 SCELO95171 688 aa0.74□□□□□ -2.29
CDH1-211ENST00000567320 CLDN9O95484 217 aa0.74□□□□□ -2.29
CDH1-211ENST00000567320 ZNF83P51522 516 aa0.74□□□□□ -2.29
CDH1-211ENST00000567320 SLC36A3Q495N2 470 aa0.74□□□□□ -2.29
CDH1-211ENST00000567320 PCOTHQ58A44 107 aa0.74□□□□□ -2.29
CDH1-211ENST00000567320 AMMECR1LQ6DCA0 310 aa0.74□□□□□ -2.29
CDH1-211ENST00000567320 WDR59Q6PJI9 974 aa0.74□□□□□ -2.29
CDH1-211ENST00000567320 Q6ZSA8 131 aa0.74□□□□□ -2.29
CDH1-211ENST00000567320 TMPPEQ6ZT21 453 aa0.74□□□□□ -2.29
CDH1-211ENST00000567320 TMEM25Q86YD3 366 aa0.74□□□□□ -2.29
CDH1-211ENST00000567320 COX18Q8N8Q8 333 aa0.74□□□□□ -2.29
CDH1-211ENST00000567320 RHEBL1Q8TAI7 183 aa0.74□□□□□ -2.29
CDH1-211ENST00000567320 RPRD1AQ96P16 312 aaPredicted RBP0.74□□□□□ -2.29
CDH1-211ENST00000567320 CNN2Q99439 309 aaKnown RBP0.74□□□□□ -2.29
CDH1-211ENST00000567320 COQ10BQ9H8M1 238 aa0.74□□□□□ -2.29
CDH1-211ENST00000567320 LINC00574Q9H8X3 128 aa0.74□□□□□ -2.29
CDH1-211ENST00000567320 SMOXQ9NWM0 555 aa0.74□□□□□ -2.29
CDH1-211ENST00000567320 ACTR3BQ9P1U1 418 aa0.74□□□□□ -2.29
CDH1-211ENST00000567320 CTNNA3Q9UI47 895 aa0.74□□□□□ -2.29
CDH1-211ENST00000567320 MAPK8IP3Q9UPT6 1336 aa0.73□□□□□ -2.29
CDH1-211ENST00000567320 IGHV3-72A0A0B4J1Y9 119 aa0.73□□□□□ -2.29
CDH1-211ENST00000567320 MBLAC1A4D2B0 266 aaPredicted RBP0.73□□□□□ -2.29
CDH1-211ENST00000567320 RGSL1A5PLK6 1076 aa0.73□□□□□ -2.29
CDH1-211ENST00000567320 KRBOX1C9JBD0 128 aa0.73□□□□□ -2.29
CDH1-211ENST00000567320 SEMA3DO95025 777 aa0.73□□□□□ -2.29
CDH1-211ENST00000567320 FGGP02679 453 aa0.73□□□□□ -2.29
CDH1-211ENST00000567320 ATF6P18850 670 aa0.73□□□□□ -2.29
CDH1-211ENST00000567320 ACOT2P49753 483 aa0.73□□□□□ -2.29
CDH1-211ENST00000567320 ZNF141Q15928 474 aa0.73□□□□□ -2.29
CDH1-211ENST00000567320 ZNF181Q2M3W8 571 aa0.73□□□□□ -2.29
CDH1-211ENST00000567320 SP6Q3SY56 376 aa0.73□□□□□ -2.29
CDH1-211ENST00000567320 APOBEC3HQ6NTF7 200 aaKnown RBP0.73□□□□□ -2.29
CDH1-211ENST00000567320 DEGS2Q6QHC5 323 aa0.73□□□□□ -2.29
CDH1-211ENST00000567320 DAZ4Q86SG3 579 aaKnown RBP0.73□□□□□ -2.29
CDH1-211ENST00000567320 NKAIN4Q8IVV8 208 aa0.73□□□□□ -2.29
CDH1-211ENST00000567320 CSGALNACT2Q8N6G5 542 aa0.73□□□□□ -2.29
CDH1-211ENST00000567320 EID2Q8N6I1 236 aa0.73□□□□□ -2.29
CDH1-211ENST00000567320 EMG1Q92979 244 aaKnown RBP0.73□□□□□ -2.29
CDH1-211ENST00000567320 PLEKHA8Q96JA3 519 aa0.73□□□□□ -2.29
CDH1-211ENST00000567320 MTMR9Q96QG7 549 aa0.73□□□□□ -2.29
CDH1-211ENST00000567320 FMO2Q99518 471 aa0.73□□□□□ -2.29
CDH1-211ENST00000567320 THUMPD2Q9BTF0 503 aaKnown RBP0.73□□□□□ -2.29
CDH1-211ENST00000567320 ABCG5Q9H222 651 aa0.73□□□□□ -2.29
CDH1-211ENST00000567320 TRIM45Q9H8W5 580 aaPredicted RBP0.73□□□□□ -2.29
CDH1-211ENST00000567320 DAZ1Q9NQZ3 744 aaKnown RBP0.73□□□□□ -2.29
CDH1-211ENST00000567320 IL37Q9NZH6 218 aa0.73□□□□□ -2.29
CDH1-211ENST00000567320 CDC40O60508 579 aaKnown RBP eCLIP0.72□□□□□ -2.29
CDH1-211ENST00000567320 C1orf105O95561 183 aa0.72□□□□□ -2.29
CDH1-211ENST00000567320 CRYGBP07316 175 aa0.72□□□□□ -2.29
CDH1-211ENST00000567320 KRT13P13646 458 aa0.72□□□□□ -2.29
CDH1-211ENST00000567320 RPA2P15927 270 aa0.72□□□□□ -2.29
CDH1-211ENST00000567320 CSRP1P21291 193 aaKnown RBP0.72□□□□□ -2.29
CDH1-211ENST00000567320 HLA-DMAP28067 261 aa0.72□□□□□ -2.29
CDH1-211ENST00000567320 VHLP40337 213 aa0.72□□□□□ -2.29
CDH1-211ENST00000567320 UBE2E1P51965 193 aa0.72□□□□□ -2.29
CDH1-211ENST00000567320 RPL23P62829 140 aaKnown RBP0.72□□□□□ -2.29
CDH1-211ENST00000567320 TGM3Q08188 693 aa0.72□□□□□ -2.29
CDH1-211ENST00000567320 SLC9A3R2Q15599 337 aa0.72□□□□□ -2.29
CDH1-211ENST00000567320 PDK4Q16654 411 aa0.72□□□□□ -2.29
CDH1-211ENST00000567320 H3F3CQ6NXT2 135 aa0.72□□□□□ -2.29
CDH1-211ENST00000567320 CCDC73Q6ZRK6 1079 aa0.72□□□□□ -2.29
CDH1-211ENST00000567320 ARL10Q8N8L6 244 aa0.72□□□□□ -2.29
CDH1-211ENST00000567320 ZFP41Q8N8Y5 198 aa0.72□□□□□ -2.29
CDH1-211ENST00000567320 MUC7Q8TAX7 377 aa0.72□□□□□ -2.29
CDH1-211ENST00000567320 CPNE4Q96A23 557 aaPredicted RBP0.72□□□□□ -2.29
CDH1-211ENST00000567320 C10orf35Q96D05 121 aa0.72□□□□□ -2.29
CDH1-211ENST00000567320 IFT74Q96LB3 600 aa0.72□□□□□ -2.29
CDH1-211ENST00000567320 RNF145Q96MT1 663 aa0.72□□□□□ -2.29
CDH1-211ENST00000567320 PARD6BQ9BYG5 372 aa0.72□□□□□ -2.29
CDH1-211ENST00000567320 GCOM2Q9BZD3 368 aaPredicted RBP0.72□□□□□ -2.29
CDH1-211ENST00000567320 SDAD1Q9NVU7 687 aaKnown RBP eCLIP0.72□□□□□ -2.29
CDH1-211ENST00000567320 PIGLQ9Y2B2 252 aa0.72□□□□□ -2.29
CDH1-211ENST00000567320 D6RAR5 112 aa0.71□□□□□ -2.3
CDH1-211ENST00000567320 EIF4E2O60573 245 aaKnown RBP0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms