RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 CTSSP25774 331 aa16.43■□□□□ 0.22
COMMD4-213ENST00000565834 PSMA1P25786 263 aaKnown RBP16.43■□□□□ 0.22
COMMD4-213ENST00000565834 CASP6P55212 293 aa16.43■□□□□ 0.22
COMMD4-213ENST00000565834 PCBD1P61457 104 aa16.43■□□□□ 0.22
COMMD4-213ENST00000565834 HIST1H3AP68431 136 aa16.43■□□□□ 0.22
COMMD4-213ENST00000565834 CACNA1BQ00975 2339 aa16.43■□□□□ 0.22
COMMD4-213ENST00000565834 SCRN3Q0VDG4 424 aa16.43■□□□□ 0.22
COMMD4-213ENST00000565834 PMPCAQ10713 525 aa16.43■□□□□ 0.22
COMMD4-213ENST00000565834 TAF13Q15543 124 aa16.43■□□□□ 0.22
COMMD4-213ENST00000565834 TIMM50Q3ZCQ8 353 aa16.43■□□□□ 0.22
COMMD4-213ENST00000565834 HIST2H3PS2Q5TEC6 136 aa16.43■□□□□ 0.22
COMMD4-213ENST00000565834 DMKNQ6E0U4 476 aaPredicted RBP16.43■□□□□ 0.22
COMMD4-213ENST00000565834 HIST2H3AQ71DI3 136 aa16.43■□□□□ 0.22
COMMD4-213ENST00000565834 SYT9Q86SS6 491 aa16.43■□□□□ 0.22
COMMD4-213ENST00000565834 WACQ9BTA9 647 aa16.43■□□□□ 0.22
COMMD4-213ENST00000565834 PNRC2Q9NPJ4 139 aaKnown RBP16.43■□□□□ 0.22
COMMD4-213ENST00000565834 A0A096LPE4 126 aa16.43■□□□□ 0.22
COMMD4-213ENST00000565834 TRBV2A0A0J9YWF9 115 aa16.43■□□□□ 0.22
COMMD4-213ENST00000565834 A0A1W2PPZ6 126 aa16.43■□□□□ 0.22
COMMD4-213ENST00000565834 AIREO43918 545 aa16.43■□□□□ 0.22
COMMD4-213ENST00000565834 CGAP01215 116 aa16.43■□□□□ 0.22
COMMD4-213ENST00000565834 NR4A1P22736 598 aa16.43■□□□□ 0.22
COMMD4-213ENST00000565834 GABRA5P31644 462 aa16.43■□□□□ 0.22
COMMD4-213ENST00000565834 RPS25P62851 125 aaKnown RBP16.43■□□□□ 0.22
COMMD4-213ENST00000565834 TGFBR3Q03167 851 aa16.43■□□□□ 0.22
COMMD4-213ENST00000565834 SLC3A1Q07837 685 aa16.43■□□□□ 0.22
COMMD4-213ENST00000565834 ANKRD16Q6P6B7 361 aa16.43■□□□□ 0.22
COMMD4-213ENST00000565834 OR1K1Q8NGR3 316 aa16.43■□□□□ 0.22
COMMD4-213ENST00000565834 RNF166Q96A37 237 aaPredicted RBP16.43■□□□□ 0.22
COMMD4-213ENST00000565834 SMIM19Q96E16 107 aa16.43■□□□□ 0.22
COMMD4-213ENST00000565834 BCL7BQ9BQE9 202 aa16.43■□□□□ 0.22
COMMD4-213ENST00000565834 OR51E2Q9H255 320 aa16.43■□□□□ 0.22
COMMD4-213ENST00000565834 COL6A6A6NMZ7 2263 aa16.42■□□□□ 0.22
COMMD4-213ENST00000565834 CD8BP10966 210 aa16.42■□□□□ 0.22
COMMD4-213ENST00000565834 ZNF32P17041 273 aa16.42■□□□□ 0.22
COMMD4-213ENST00000565834 IGHV1-2P23083 117 aa16.42■□□□□ 0.22
COMMD4-213ENST00000565834 SLC36A2Q495M3 483 aa16.42■□□□□ 0.22
COMMD4-213ENST00000565834 CCDC92Q53HC0 331 aaPredicted RBP16.42■□□□□ 0.22
COMMD4-213ENST00000565834 HSD17B8Q92506 261 aa16.42■□□□□ 0.22
COMMD4-213ENST00000565834 RPL3LQ92901 407 aaKnown RBP16.42■□□□□ 0.22
COMMD4-213ENST00000565834 TMEM203Q969S6 136 aa16.42■□□□□ 0.22
COMMD4-213ENST00000565834 C12orf43Q96C57 262 aaKnown RBP16.42■□□□□ 0.22
COMMD4-213ENST00000565834 DOK1Q99704 481 aa16.42■□□□□ 0.22
COMMD4-213ENST00000565834 ATF6BQ99941 703 aa16.42■□□□□ 0.22
COMMD4-213ENST00000565834 TMED9Q9BVK6 235 aa16.42■□□□□ 0.22
COMMD4-213ENST00000565834 OPN3Q9H1Y3 402 aaPredicted RBP16.42■□□□□ 0.22
COMMD4-213ENST00000565834 DDX28Q9NUL7 540 aaKnown RBP16.42■□□□□ 0.22
COMMD4-213ENST00000565834 PLEK2Q9NYT0 353 aa16.42■□□□□ 0.22
COMMD4-213ENST00000565834 FBXL3Q9UKT7 428 aa16.42■□□□□ 0.22
COMMD4-213ENST00000565834 STUB1Q9UNE7 303 aa16.42■□□□□ 0.22
COMMD4-213ENST00000565834 SLC5A6Q9Y289 635 aa16.42■□□□□ 0.22
COMMD4-213ENST00000565834 SF3B6Q9Y3B4 125 aaKnown RBP16.42■□□□□ 0.22
COMMD4-213ENST00000565834 TIMM10BQ9Y5J6 103 aa16.42■□□□□ 0.22
COMMD4-213ENST00000565834 POLEQ07864 2286 aa16.42■□□□□ 0.22
COMMD4-213ENST00000565834 LOC100506127A0A0U1RQW1 187 aa16.41■□□□□ 0.22
COMMD4-213ENST00000565834 H3BMQ9 156 aa16.41■□□□□ 0.22
COMMD4-213ENST00000565834 LRRTM2O43300 516 aa16.41■□□□□ 0.22
COMMD4-213ENST00000565834 SGCEO43556 437 aa16.41■□□□□ 0.22
COMMD4-213ENST00000565834 PATE4P0C8F1 98 aa16.41■□□□□ 0.22
COMMD4-213ENST00000565834 CD53P19397 219 aa16.41■□□□□ 0.22
COMMD4-213ENST00000565834 HSD11B1P28845 292 aa16.41■□□□□ 0.22
COMMD4-213ENST00000565834 GDI2P50395 445 aaKnown RBP16.41■□□□□ 0.22
COMMD4-213ENST00000565834 NANOS3P60323 173 aaKnown RBP16.41■□□□□ 0.22
COMMD4-213ENST00000565834 GRB2P62993 217 aaKnown RBP16.41■□□□□ 0.22
COMMD4-213ENST00000565834 ALKBH1Q13686 389 aaKnown RBP16.41■□□□□ 0.22
COMMD4-213ENST00000565834 RAB35Q15286 201 aa16.41■□□□□ 0.22
COMMD4-213ENST00000565834 CTF1Q16619 201 aa16.41■□□□□ 0.22
COMMD4-213ENST00000565834 ZNF829Q3KNS6 432 aaPredicted RBP16.41■□□□□ 0.22
COMMD4-213ENST00000565834 ELFN2Q5R3F8 820 aa16.41■□□□□ 0.22
COMMD4-213ENST00000565834 ZNF544Q6NX49 715 aa16.41■□□□□ 0.22
COMMD4-213ENST00000565834 FDX2Q6P4F2 183 aa16.41■□□□□ 0.22
COMMD4-213ENST00000565834 ZNF610Q8N9Z0 462 aa16.41■□□□□ 0.22
COMMD4-213ENST00000565834 OR2G2Q8NGZ5 317 aa16.41■□□□□ 0.22
COMMD4-213ENST00000565834 CHCHD6Q9BRQ6 235 aa16.41■□□□□ 0.22
COMMD4-213ENST00000565834 HDHD2Q9H0R4 259 aa16.41■□□□□ 0.22
COMMD4-213ENST00000565834 NIPAL2Q9H841 368 aa16.41■□□□□ 0.22
COMMD4-213ENST00000565834 R4GMQ9 66 aa16.41■□□□□ 0.22
COMMD4-213ENST00000565834 TRGV8A0A0C4DH27 118 aa16.4■□□□□ 0.22
COMMD4-213ENST00000565834 E9PLN8 166 aa16.4■□□□□ 0.22
COMMD4-213ENST00000565834 DOK2O60496 412 aa16.4■□□□□ 0.22
COMMD4-213ENST00000565834 DCTDP32321 178 aa16.4■□□□□ 0.22
COMMD4-213ENST00000565834 OPRM1P35372 400 aa16.4■□□□□ 0.22
COMMD4-213ENST00000565834 LSM3P62310 102 aaKnown RBP16.4■□□□□ 0.22
COMMD4-213ENST00000565834 BEND4Q6ZU67 534 aa16.4■□□□□ 0.22
COMMD4-213ENST00000565834 GABRG1Q8N1C3 465 aa16.4■□□□□ 0.22
COMMD4-213ENST00000565834 FGFBP3Q8TAT2 258 aa16.4■□□□□ 0.22
COMMD4-213ENST00000565834 RPS4Y2Q8TD47 263 aa16.4■□□□□ 0.22
COMMD4-213ENST00000565834 BCL2L2Q92843 193 aaPredicted RBP16.4■□□□□ 0.22
COMMD4-213ENST00000565834 GHSRQ92847 366 aa16.4■□□□□ 0.22
COMMD4-213ENST00000565834 PGLYRP3Q96LB9 341 aa16.4■□□□□ 0.22
COMMD4-213ENST00000565834 VKORC1Q9BQB6 163 aa16.4■□□□□ 0.22
COMMD4-213ENST00000565834 OR2H1Q9GZK4 316 aa16.4■□□□□ 0.22
COMMD4-213ENST00000565834 RNF121Q9H920 327 aa16.4■□□□□ 0.22
COMMD4-213ENST00000565834 EXOSC4Q9NPD3 245 aaKnown RBP16.4■□□□□ 0.22
COMMD4-213ENST00000565834 GALNT8Q9NY28 637 aa16.4■□□□□ 0.22
COMMD4-213ENST00000565834 ZNF224Q9NZL3 707 aa16.4■□□□□ 0.22
COMMD4-213ENST00000565834 GTF2A1LQ9UNN4 478 aa16.4■□□□□ 0.22
COMMD4-213ENST00000565834 A0A0G2JNJ9 132 aa16.4■□□□□ 0.22
COMMD4-213ENST00000565834 CIB4A0PJX0 185 aa16.4■□□□□ 0.22
COMMD4-213ENST00000565834 GPX5O75715 221 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms