RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 IGLV5-45A0A087WSX0 123 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 TSPAN11A1L157 253 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 LINC00862A6NCI5 91 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 CASC3O15234 703 aaKnown RBP3.65□□□□□ -1.83
LINC00561-201ENST00000565815 DUX1O43812 170 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 PRAF2O60831 178 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 ZNF780AO75290 641 aaPredicted RBP3.65□□□□□ -1.83
LINC00561-201ENST00000565815 DIRAS1O95057 198 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 LRATO95237 230 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 CRYZL1O95825 349 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 IGHV2-70P01814 119 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 HLA-DPB1P04440 258 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 CSF3P09919 207 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 COX6B1P14854 86 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 IFNA8P32881 189 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 RCVRNP35243 200 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 SPINT3P49223 89 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 STK19P49842 368 aaPredicted RBP3.65□□□□□ -1.83
LINC00561-201ENST00000565815 SMSP52788 366 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 ATP12AP54707 1039 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 PDSS1Q5T2R2 415 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 SAXO2Q658L1 398 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 RUSC1-AS1Q66K80 236 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 C22orf39Q6P5X5 142 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 AGTRAPQ6RW13 159 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 TAF8Q7Z7C8 310 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 CLECL1Q8IZS7 167 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 NKAIN3Q8N8D7 197 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 OR7G3Q8NG95 312 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 OR10Q1Q8NGQ4 319 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 OR2A12Q8NGT7 310 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 OR52N1Q8NH53 320 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 WFDC5Q8TCV5 224 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 SLAMF9Q96A28 289 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 DIRAS2Q96HU8 199 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 SLC38A2Q96QD8 506 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 OR5M11Q96RB7 305 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 NIPSNAP1Q9BPW8 284 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 KCNS3Q9BQ31 491 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 ZSCAN5AQ9BUG6 496 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 APOOQ9BUR5 198 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 TSSK6Q9BXA6 273 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 LAT2Q9GZY6 243 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 POLR2J3Q9H1A7 115 aaKnown RBP3.65□□□□□ -1.83
LINC00561-201ENST00000565815 TRIM45Q9H8W5 580 aaPredicted RBP3.65□□□□□ -1.83
LINC00561-201ENST00000565815 TXNL4BQ9NX01 149 aaKnown RBP3.65□□□□□ -1.83
LINC00561-201ENST00000565815 PAQR5Q9NXK6 330 aaPredicted RBP3.65□□□□□ -1.83
LINC00561-201ENST00000565815 ING4Q9UNL4 249 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 SLC9A8Q9Y2E8 581 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 AUP1Q9Y679 476 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 WDR87Q6ZQQ6 2873 aa3.65□□□□□ -1.83
LINC00561-201ENST00000565815 IGHV5-10-1A0A0J9YXX1 117 aa3.64□□□□□ -1.83
LINC00561-201ENST00000565815 A0A1B0GVI7 797 aa3.64□□□□□ -1.83
LINC00561-201ENST00000565815 GNG14A0A1W2PPG7 69 aa3.64□□□□□ -1.83
LINC00561-201ENST00000565815 OR5K4A6NMS3 321 aa3.64□□□□□ -1.83
LINC00561-201ENST00000565815 NOS1APO75052 506 aaPredicted RBP3.64□□□□□ -1.83
LINC00561-201ENST00000565815 ENTPD6O75354 484 aa3.64□□□□□ -1.83
LINC00561-201ENST00000565815 PAK4O96013 591 aaPredicted RBP3.64□□□□□ -1.83
LINC00561-201ENST00000565815 C1GALT1C1LP0DN25 315 aa3.64□□□□□ -1.83
LINC00561-201ENST00000565815 SLC2A2P11168 524 aaPredicted RBP3.64□□□□□ -1.83
LINC00561-201ENST00000565815 PPP2R1BP30154 601 aa3.64□□□□□ -1.83
LINC00561-201ENST00000565815 TGFBR1P36897 503 aa3.64□□□□□ -1.83
LINC00561-201ENST00000565815 INPP1P49441 399 aa3.64□□□□□ -1.83
LINC00561-201ENST00000565815 RRAS2P62070 204 aaPredicted RBP3.64□□□□□ -1.83
LINC00561-201ENST00000565815 GALK2Q01415 458 aa3.64□□□□□ -1.83
LINC00561-201ENST00000565815 C2orf80Q0P641 193 aa3.64□□□□□ -1.83
LINC00561-201ENST00000565815 PYDC2Q56P42 97 aa3.64□□□□□ -1.83
LINC00561-201ENST00000565815 LCE1AQ5T7P2 110 aa3.64□□□□□ -1.83
LINC00561-201ENST00000565815 FAM122CQ6P4D5 195 aa3.64□□□□□ -1.83
LINC00561-201ENST00000565815 BHLHB9Q6PI77 547 aa3.64□□□□□ -1.83
LINC00561-201ENST00000565815 MEX3BQ6ZN04 569 aaKnown RBP3.64□□□□□ -1.83
LINC00561-201ENST00000565815 SLC22A15Q8IZD6 547 aa3.64□□□□□ -1.83
LINC00561-201ENST00000565815 CLDN19Q8N6F1 224 aa3.64□□□□□ -1.83
LINC00561-201ENST00000565815 GPR26Q8NDV2 337 aa3.64□□□□□ -1.83
LINC00561-201ENST00000565815 OR1J1Q8NGS3 322 aa3.64□□□□□ -1.83
LINC00561-201ENST00000565815 ZNF514Q96K75 400 aaPredicted RBP3.64□□□□□ -1.83
LINC00561-201ENST00000565815 TMEM43Q9BTV4 400 aa3.64□□□□□ -1.83
LINC00561-201ENST00000565815 WRAP53Q9BUR4 548 aaKnown RBP3.64□□□□□ -1.83
LINC00561-201ENST00000565815 EBPLQ9BY08 206 aa3.64□□□□□ -1.83
LINC00561-201ENST00000565815 BARHL1Q9BZE3 327 aa3.64□□□□□ -1.83
LINC00561-201ENST00000565815 WNT5BQ9H1J7 359 aa3.64□□□□□ -1.83
LINC00561-201ENST00000565815 C12orf10Q9HB07 376 aa3.64□□□□□ -1.83
LINC00561-201ENST00000565815 BCL2L10Q9HD36 194 aa3.64□□□□□ -1.83
LINC00561-201ENST00000565815 INPP5EQ9NRR6 644 aa3.64□□□□□ -1.83
LINC00561-201ENST00000565815 STOX2Q9P2F5 926 aaPredicted RBP3.64□□□□□ -1.83
LINC00561-201ENST00000565815 LRP12Q9Y561 859 aa3.64□□□□□ -1.83
LINC00561-201ENST00000565815 LOC101059948A0A1B0GTJ6 334 aa3.64□□□□□ -1.83
LINC00561-201ENST00000565815 A0A1B0GUV1 79 aa3.64□□□□□ -1.83
LINC00561-201ENST00000565815 A0A1W2PQL4 384 aaPredicted RBP3.64□□□□□ -1.83
LINC00561-201ENST00000565815 SLC5A10A0PJK1 596 aa3.64□□□□□ -1.83
LINC00561-201ENST00000565815 BET1O15155 118 aa3.64□□□□□ -1.83
LINC00561-201ENST00000565815 LYRM1O43325 122 aa3.64□□□□□ -1.83
LINC00561-201ENST00000565815 SYNGR3O43761 229 aa3.64□□□□□ -1.83
LINC00561-201ENST00000565815 STK17BO94768 372 aa3.64□□□□□ -1.83
LINC00561-201ENST00000565815 CDRT1O95170 752 aa3.64□□□□□ -1.83
LINC00561-201ENST00000565815 DHFRP00374 187 aa3.64□□□□□ -1.83
LINC00561-201ENST00000565815 FRKP42685 505 aaPredicted RBP3.64□□□□□ -1.83
LINC00561-201ENST00000565815 OR3A3P47888 321 aa3.64□□□□□ -1.83
LINC00561-201ENST00000565815 UQCRFS1P47985 274 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms