RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 EDA2RQ9HAV5 297 aa2.66□□□□□ -1.98
CHD9-215ENST00000565442 AGPAT4Q9NRZ5 378 aa2.66□□□□□ -1.98
CHD9-215ENST00000565442 MTCH1Q9NZJ7 389 aa2.66□□□□□ -1.98
CHD9-215ENST00000565442 IGSF9BQ9UPX0 1349 aa2.66□□□□□ -1.98
CHD9-215ENST00000565442 DENND4AQ7Z401 1863 aa2.65□□□□□ -1.98
CHD9-215ENST00000565442 SERTM2A0A1B0GWG4 89 aa2.65□□□□□ -1.99
CHD9-215ENST00000565442 K7EMT4 169 aa2.65□□□□□ -1.99
CHD9-215ENST00000565442 B4GALT5O43286 388 aa2.65□□□□□ -1.99
CHD9-215ENST00000565442 FLOT1O75955 427 aa2.65□□□□□ -1.99
CHD9-215ENST00000565442 MRPL3P09001 348 aaKnown RBP2.65□□□□□ -1.99
CHD9-215ENST00000565442 CD3GP09693 182 aa2.65□□□□□ -1.99
CHD9-215ENST00000565442 RHOXF2BP0C7M4 288 aa2.65□□□□□ -1.99
CHD9-215ENST00000565442 GALP22466 123 aa2.65□□□□□ -1.99
CHD9-215ENST00000565442 STOMP27105 288 aa2.65□□□□□ -1.99
CHD9-215ENST00000565442 OR1E1P30953 314 aa2.65□□□□□ -1.99
CHD9-215ENST00000565442 UBE2NP61088 152 aaKnown RBP2.65□□□□□ -1.99
CHD9-215ENST00000565442 ILKQ13418 452 aa2.65□□□□□ -1.99
CHD9-215ENST00000565442 EIF4EBP1Q13541 118 aaPredicted RBP2.65□□□□□ -1.99
CHD9-215ENST00000565442 C16orf72Q14CZ0 275 aa2.65□□□□□ -1.99
CHD9-215ENST00000565442 HSDL1Q3SXM5 330 aa2.65□□□□□ -1.99
CHD9-215ENST00000565442 UBE2UQ5VVX9 321 aa2.65□□□□□ -1.99
CHD9-215ENST00000565442 KHDRBS2Q5VWX1 349 aaKnown RBP2.65□□□□□ -1.99
CHD9-215ENST00000565442 KRTAP5-7Q6L8G8 165 aa2.65□□□□□ -1.99
CHD9-215ENST00000565442 TMEM53Q6P2H8 277 aa2.65□□□□□ -1.99
CHD9-215ENST00000565442 PRMT9Q6P2P2 845 aa2.65□□□□□ -1.99
CHD9-215ENST00000565442 ABHD12BQ7Z5M8 362 aaPredicted RBP2.65□□□□□ -1.99
CHD9-215ENST00000565442 MRPL55Q7Z7F7 128 aaKnown RBP2.65□□□□□ -1.99
CHD9-215ENST00000565442 OFCC1Q8IZS5 231 aa2.65□□□□□ -1.99
CHD9-215ENST00000565442 OR10AD1Q8NGE0 317 aa2.65□□□□□ -1.99
CHD9-215ENST00000565442 OR5K2Q8NHB8 316 aa2.65□□□□□ -1.99
CHD9-215ENST00000565442 APH1BQ8WW43 257 aa2.65□□□□□ -1.99
CHD9-215ENST00000565442 TMEM230Q96A57 120 aa2.65□□□□□ -1.99
CHD9-215ENST00000565442 MRGPRFQ96AM1 343 aa2.65□□□□□ -1.99
CHD9-215ENST00000565442 SEH1LQ96EE3 360 aa2.65□□□□□ -1.99
CHD9-215ENST00000565442 GALNT14Q96FL9 552 aa2.65□□□□□ -1.99
CHD9-215ENST00000565442 ACTR3CQ9C0K3 210 aaPredicted RBP2.65□□□□□ -1.99
CHD9-215ENST00000565442 EXO5Q9H790 373 aa2.65□□□□□ -1.99
CHD9-215ENST00000565442 WFDC1Q9HC57 220 aa2.65□□□□□ -1.99
CHD9-215ENST00000565442 HMG20AQ9NP66 347 aa2.65□□□□□ -1.99
CHD9-215ENST00000565442 CCNB1IP1Q9NPC3 277 aa2.65□□□□□ -1.99
CHD9-215ENST00000565442 ZNF355PQ9NSJ1 428 aa2.65□□□□□ -1.99
CHD9-215ENST00000565442 NECAP2Q9NVZ3 263 aa2.65□□□□□ -1.99
CHD9-215ENST00000565442 INSRP06213 1382 aa2.64□□□□□ -1.99
CHD9-215ENST00000565442 IGLV4-60A0A075B6I1 120 aa2.64□□□□□ -1.99
CHD9-215ENST00000565442 IGLV1-50A0A075B6I6 118 aa2.64□□□□□ -1.99
CHD9-215ENST00000565442 WRBO00258 174 aa2.64□□□□□ -1.99
CHD9-215ENST00000565442 FOXH1O75593 365 aa2.64□□□□□ -1.99
CHD9-215ENST00000565442 CCNB2O95067 398 aa2.64□□□□□ -1.99
CHD9-215ENST00000565442 ADRA2AP08913 450 aa2.64□□□□□ -1.99
CHD9-215ENST00000565442 CT45A6P0DMU7 189 aa2.64□□□□□ -1.99
CHD9-215ENST00000565442 CT45A5P0DMU8 189 aa2.64□□□□□ -1.99
CHD9-215ENST00000565442 CT45A7P0DMV0 189 aa2.64□□□□□ -1.99
CHD9-215ENST00000565442 TCN2P20062 427 aa2.64□□□□□ -1.99
CHD9-215ENST00000565442 U2AF2P26368 475 aaKnown RBP eCLIP2.64□□□□□ -1.997e-6■■□□□ 14.4
CHD9-215ENST00000565442 HMOX2P30519 316 aa2.64□□□□□ -1.99
CHD9-215ENST00000565442 ORMDL2Q53FV1 153 aa2.64□□□□□ -1.99
CHD9-215ENST00000565442 XKR4Q5GH76 650 aa2.64□□□□□ -1.99
CHD9-215ENST00000565442 CT45A1Q5HYN5 189 aa2.64□□□□□ -1.99
CHD9-215ENST00000565442 FAM78AQ5JUQ0 283 aa2.64□□□□□ -1.99
CHD9-215ENST00000565442 TMEM205Q6UW68 189 aa2.64□□□□□ -1.99
CHD9-215ENST00000565442 NTM-AS1Q6ZSK4 140 aa2.64□□□□□ -1.99
CHD9-215ENST00000565442 TTC29Q8NA56 475 aaPredicted RBP2.64□□□□□ -1.99
CHD9-215ENST00000565442 OR52E2Q8NGJ4 325 aa2.64□□□□□ -1.99
CHD9-215ENST00000565442 OR9G4Q8NGQ1 327 aa2.64□□□□□ -1.99
CHD9-215ENST00000565442 CT45A3Q8NHU0 189 aa2.64□□□□□ -1.99
CHD9-215ENST00000565442 PIFOQ8TCI5 191 aa2.64□□□□□ -1.99
CHD9-215ENST00000565442 TSEN15Q8WW01 171 aaKnown RBP2.64□□□□□ -1.99
CHD9-215ENST00000565442 FRZBQ92765 325 aa2.64□□□□□ -1.99
CHD9-215ENST00000565442 C8orf44Q96CB5 159 aa2.64□□□□□ -1.99
CHD9-215ENST00000565442 XPO6Q96QU8 1125 aaKnown RBP2.64□□□□□ -1.99
CHD9-215ENST00000565442 ZNF382Q96SR6 550 aa2.64□□□□□ -1.99
CHD9-215ENST00000565442 TEKT3Q9BXF9 490 aa2.64□□□□□ -1.99
CHD9-215ENST00000565442 UCK2Q9BZX2 261 aa2.64□□□□□ -1.99
CHD9-215ENST00000565442 C20orf96Q9NUD7 363 aaPredicted RBP2.64□□□□□ -1.99
CHD9-215ENST00000565442 ZNRD1Q9P1U0 126 aa2.64□□□□□ -1.99
CHD9-215ENST00000565442 NCBP2LA6PVI3 153 aaKnown RBP2.63□□□□□ -1.99
CHD9-215ENST00000565442 SLC9A3R1O14745 358 aaPredicted RBP2.63□□□□□ -1.99
CHD9-215ENST00000565442 RAD51BO15315 384 aa2.63□□□□□ -1.99
CHD9-215ENST00000565442 RAD51CO43502 376 aa2.63□□□□□ -1.99
CHD9-215ENST00000565442 WISP3O95389 354 aaPredicted RBP2.63□□□□□ -1.99
CHD9-215ENST00000565442 LSM8O95777 96 aaKnown RBP2.63□□□□□ -1.99
CHD9-215ENST00000565442 CD160O95971 181 aa2.63□□□□□ -1.99
CHD9-215ENST00000565442 ERGP11308 486 aa2.63□□□□□ -1.99
CHD9-215ENST00000565442 PSMC3P17980 439 aa2.63□□□□□ -1.99
CHD9-215ENST00000565442 RAB3AP20336 220 aa2.63□□□□□ -1.99
CHD9-215ENST00000565442 SSTR5P35346 364 aa2.63□□□□□ -1.99
CHD9-215ENST00000565442 HCAR3P49019 387 aa2.63□□□□□ -1.99
CHD9-215ENST00000565442 P2RX1P51575 399 aa2.63□□□□□ -1.99
CHD9-215ENST00000565442 PPP1CBP62140 327 aa2.63□□□□□ -1.99
CHD9-215ENST00000565442 QPRTQ15274 297 aa2.63□□□□□ -1.99
CHD9-215ENST00000565442 IRF4Q15306 451 aa2.63□□□□□ -1.99
CHD9-215ENST00000565442 PGGHGQ32M88 737 aa2.63□□□□□ -1.99
CHD9-215ENST00000565442 SMUG1Q53HV7 270 aa2.63□□□□□ -1.99
CHD9-215ENST00000565442 FBXW9Q5XUX1 488 aa2.63□□□□□ -1.99
CHD9-215ENST00000565442 IGFL3Q6UXB1 125 aa2.63□□□□□ -1.99
CHD9-215ENST00000565442 NPSR1Q6W5P4 371 aa2.63□□□□□ -1.99
CHD9-215ENST00000565442 SSX9Q7RTT3 188 aa2.63□□□□□ -1.99
CHD9-215ENST00000565442 NPWQ8N729 165 aa2.63□□□□□ -1.99
CHD9-215ENST00000565442 CHST4Q8NCG5 386 aa2.63□□□□□ -1.99
CHD9-215ENST00000565442 C15orf40Q8WUR7 153 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms