RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 CLDND1Q9NY35 253 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 ZNF256Q9Y2P7 627 aaPredicted RBP4.68□□□□□ -1.66
SMG1-211ENST00000565324 FRS3O43559 492 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 ZNF17P17021 662 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 TCN2P20062 427 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 OR3A1P47881 315 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 ZNF280AP59817 542 aaPredicted RBP4.68□□□□□ -1.66
SMG1-211ENST00000565324 KCNJ10P78508 379 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 SYT14P1Q58G82 188 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 MFSD12Q6NUT3 480 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 TP53RKQ96S44 253 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 RTL8AQ9BWD3 113 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 RNF39Q9H2S5 420 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 PRSS16Q9NQE7 514 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 GDF2Q9UK05 429 aaPredicted RBP4.68□□□□□ -1.66
SMG1-211ENST00000565324 ARRDC5A6NEK1 342 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 HELTA6NFD8 242 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 HPP00738 406 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 PGA3P0DJD8 388 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 MMP11P24347 488 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 GDF1P27539 372 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 SHC1P29353 583 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 AKR1C3P42330 323 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 ARSDP51689 593 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 DTWD2Q8NBA8 298 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 NECAP1Q8NC96 275 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 CMBLQ96DG6 245 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 SAT2Q96F10 170 aaPredicted RBP4.68□□□□□ -1.66
SMG1-211ENST00000565324 NAT8BQ9UHF3 227 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 CA14Q9ULX7 337 aa4.68□□□□□ -1.66
SMG1-211ENST00000565324 C7orf72A4D263 438 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 AQP7O14520 342 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 OR4E1P0C645 316 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 SULT1A3P0DMM9 295 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 SULT1A4P0DMN0 295 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 CLDN17P56750 224 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 HES1Q14469 280 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 Q6ZN92 141 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 SLC16A12Q6ZSM3 486 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 NLGN4XQ8N0W4 816 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 NANOGP1Q8N7R0 232 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 TMED6Q8WW62 240 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 NTNG2Q96CW9 530 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 ANAPC16Q96DE5 110 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 TUBGCP6Q96RT7 1819 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 DOCK9Q9BZ29 2069 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 DUXBA0A1W2PPF3 345 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 PRAMEF25A6NGN4 478 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 SH2D7A6NKC9 451 aaPredicted RBP4.67□□□□□ -1.66
SMG1-211ENST00000565324 HOXC11O43248 304 aaPredicted RBP4.67□□□□□ -1.66
SMG1-211ENST00000565324 SCGB1A1P11684 91 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 MAP1BP46821 2468 aaKnown RBP4.67□□□□□ -1.66
SMG1-211ENST00000565324 PCBP4P57723 403 aaKnown RBP4.67□□□□□ -1.66
SMG1-211ENST00000565324 PRAMEF5Q5TYX0 476 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 PRAMEF6Q5VXH4 476 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 CNEP1R1Q8N9A8 125 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 ZBTB44Q8NCP5 570 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 OR5K2Q8NHB8 316 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 NEIL1Q96FI4 390 aaPredicted RBP4.67□□□□□ -1.66
SMG1-211ENST00000565324 COMMD5Q9GZQ3 224 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 MED20Q9H944 212 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 IGKV6D-41A0A0C4DH26 115 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 A0A1B0GTQ1 180 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 ZNF840PA6NDX5 716 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 ABOP16442 354 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 ACHEP22303 614 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 RBP2P50120 134 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 HLA-BQ31612 363 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 MANEAQ5SRI9 462 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 C6orf132Q5T0Z8 1188 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 DND1Q8IYX4 353 aaKnown RBP4.67□□□□□ -1.66
SMG1-211ENST00000565324 SLC38A9Q8NBW4 561 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 GPR78Q96P69 363 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 PLA2G12AQ9BZM1 189 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 GABARAPL1Q9H0R8 117 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 ZCWPW2A0A1B0GU75 182 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 AOAHP28039 575 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 ZNF140P52738 457 aaPredicted RBP4.67□□□□□ -1.66
SMG1-211ENST00000565324 CARD18P57730 90 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 DSC1Q08554 894 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 ETFDHQ16134 617 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 OR2G6Q5TZ20 316 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 FCRL6Q6DN72 434 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 SIGIRRQ6IA17 410 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 ABI3BPQ7Z7G0 1075 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 ARHGEF39Q8N4T4 335 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 SPICQ8N5J4 248 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 ARFGAP1Q8N6T3 406 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 L3MBTL4Q8NA19 623 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 OR10G3Q8NGC4 313 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 OLIG1Q8TAK6 271 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 LMO3Q8TAP4 145 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 TAAR9Q96RI9 348 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 RHOFQ9HBH0 211 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 KCND3Q9UK17 655 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 SHHQ15465 462 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 AANATQ16613 207 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 TSACCQ96A04 125 aaPredicted RBP4.67□□□□□ -1.66
SMG1-211ENST00000565324 SMIM19Q96E16 107 aa4.67□□□□□ -1.66
SMG1-211ENST00000565324 TREX1Q9NSU2 369 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms