RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 PMELP40967 661 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 SOX3P41225 446 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 CNN1P51911 297 aaKnown RBP4.63□□□□□ -1.67
CAPN3-214ENST00000565274 WDR5P61964 334 aaKnown RBP4.63□□□□□ -1.67
CAPN3-214ENST00000565274 RRAS2P62070 204 aaPredicted RBP4.63□□□□□ -1.67
CAPN3-214ENST00000565274 RPS13P62277 151 aaKnown RBP4.63□□□□□ -1.67
CAPN3-214ENST00000565274 BTG1P62324 171 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 PPIAP62937 165 aaKnown RBP4.63□□□□□ -1.67
CAPN3-214ENST00000565274 SHC2P98077 582 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 AESQ08117 197 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 PMPCAQ10713 525 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 SF3A2Q15428 464 aaKnown RBP4.63□□□□□ -1.67
CAPN3-214ENST00000565274 EFNB3Q15768 340 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 VAMP3Q15836 100 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 HAGHQ16775 308 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 MICBQ29980 383 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 TMEM52BQ4KMG9 183 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 HSD17B12Q53GQ0 312 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 AKIRIN2Q53H80 203 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 PYDC2Q56P42 97 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 ZNF766Q5HY98 468 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 DCAF10Q5QP82 559 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 LAMTOR1Q6IAA8 161 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 DHRS7BQ6IAN0 325 aaPredicted RBP4.63□□□□□ -1.67
CAPN3-214ENST00000565274 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.63□□□□□ -1.67
CAPN3-214ENST00000565274 ZNF836Q6ZNA1 936 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 Q6ZVL8 140 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 GRINAQ7Z429 371 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 TMEM25Q86YD3 366 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 SIAH3Q8IW03 269 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 C1orf87Q8N0U7 546 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 C9orf62Q8N4C0 152 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 ZNF383Q8NA42 475 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 AQP11Q8NBQ7 271 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 OR4C5Q8NGB2 326 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 OR4K1Q8NGD4 311 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 NUBPLQ8TB37 319 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 ACOT11Q8WXI4 607 aaPredicted RBP4.63□□□□□ -1.67
CAPN3-214ENST00000565274 C11orf40Q8WZ69 217 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 SCAMP4Q969E2 229 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 NEIL2Q969S2 332 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 PPCDCQ96CD2 204 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 OTUB1Q96FW1 271 aaPredicted RBP4.63□□□□□ -1.67
CAPN3-214ENST00000565274 POM121L2Q96KW2 1035 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 HYLS1Q96M11 299 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 GPR137Q96N19 417 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 SLC6A18Q96N87 628 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 SFXN2Q96NB2 322 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 CD180Q99467 661 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 MTERF1Q99551 399 aaKnown RBP4.63□□□□□ -1.67
CAPN3-214ENST00000565274 SOSTQ9BQB4 213 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 RSG1Q9BU20 258 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 KATNB1Q9BVA0 655 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 RIOK2Q9BVS4 552 aaKnown RBP4.63□□□□□ -1.67
CAPN3-214ENST00000565274 SCNM1Q9BWG6 230 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 RBM24Q9BX46 236 aaKnown RBP4.63□□□□□ -1.67
CAPN3-214ENST00000565274 TSSK6Q9BXA6 273 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 BEX2Q9BXY8 128 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 WFDC1Q9HC57 220 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 SPHK2Q9NRA0 654 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 CUTCQ9NTM9 273 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 TXNL4BQ9NX01 149 aaKnown RBP4.63□□□□□ -1.67
CAPN3-214ENST00000565274 PLEKHB1Q9UF11 243 aaPredicted RBP4.63□□□□□ -1.67
CAPN3-214ENST00000565274 TBX21Q9UL17 535 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 EMC9Q9Y3B6 208 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 RPL36Q9Y3U8 105 aaKnown RBP4.63□□□□□ -1.67
CAPN3-214ENST00000565274 PIKFYVEQ9Y2I7 2098 aa4.63□□□□□ -1.67
CAPN3-214ENST00000565274 TRAV26-1A0A087WT03 109 aa4.62□□□□□ -1.67
CAPN3-214ENST00000565274 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.62□□□□□ -1.67
CAPN3-214ENST00000565274 PRAMEF33A0A0G2JMD5 474 aa4.62□□□□□ -1.67
CAPN3-214ENST00000565274 TMEM129A0AVI4 362 aa4.62□□□□□ -1.67
CAPN3-214ENST00000565274 TMEM202A6NGA9 273 aa4.62□□□□□ -1.67
CAPN3-214ENST00000565274 DISC1C4P0D8 188 aa4.62□□□□□ -1.67
CAPN3-214ENST00000565274 H7C2Y5 167 aa4.62□□□□□ -1.67
CAPN3-214ENST00000565274 I3L521 148 aa4.62□□□□□ -1.67
CAPN3-214ENST00000565274 J3KTA2 159 aa4.62□□□□□ -1.67
CAPN3-214ENST00000565274 DNASE2O00115 360 aaPredicted RBP4.62□□□□□ -1.67
CAPN3-214ENST00000565274 CDIPTO14735 213 aa4.62□□□□□ -1.67
CAPN3-214ENST00000565274 FFAR1O14842 300 aa4.62□□□□□ -1.67
CAPN3-214ENST00000565274 SIGLEC5O15389 551 aa4.62□□□□□ -1.67
CAPN3-214ENST00000565274 LYRM1O43325 122 aa4.62□□□□□ -1.67
CAPN3-214ENST00000565274 LCMT2O60294 686 aaKnown RBP4.62□□□□□ -1.67
CAPN3-214ENST00000565274 PRAMEF10O60809 474 aa4.62□□□□□ -1.67
CAPN3-214ENST00000565274 C6orf47O95873 294 aa4.62□□□□□ -1.67
CAPN3-214ENST00000565274 SOD1P00441 154 aa4.62□□□□□ -1.67
CAPN3-214ENST00000565274 GASTP01350 101 aa4.62□□□□□ -1.67
CAPN3-214ENST00000565274 DBHP09172 617 aa4.62□□□□□ -1.67
CAPN3-214ENST00000565274 LINC00271P0C7V0 271 aa4.62□□□□□ -1.67
CAPN3-214ENST00000565274 METTL15P1P0C7V9 234 aa4.62□□□□□ -1.67
CAPN3-214ENST00000565274 SLC2A2P11168 524 aaPredicted RBP4.62□□□□□ -1.67
CAPN3-214ENST00000565274 ANXA3P12429 323 aa4.62□□□□□ -1.67
CAPN3-214ENST00000565274 GTF2F2P13984 249 aa4.62□□□□□ -1.67
CAPN3-214ENST00000565274 GABRA1P14867 456 aa4.62□□□□□ -1.67
CAPN3-214ENST00000565274 ARSBP15848 533 aa4.62□□□□□ -1.67
CAPN3-214ENST00000565274 ANXA7P20073 488 aaKnown RBP4.62□□□□□ -1.67
CAPN3-214ENST00000565274 TNFRSF1BP20333 461 aa4.62□□□□□ -1.67
CAPN3-214ENST00000565274 SERPINA2P20848 420 aa4.62□□□□□ -1.67
CAPN3-214ENST00000565274 PAICSP22234 425 aaKnown RBP4.62□□□□□ -1.67
CAPN3-214ENST00000565274 ANOS1P23352 680 aa4.62□□□□□ -1.67
CAPN3-214ENST00000565274 AQP1P29972 269 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms