RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 SAMD8Q96LT4 415 aa12.44□□□□□ -0.42
USB1-210ENST00000565151 DDOQ99489 341 aa12.44□□□□□ -0.42
USB1-210ENST00000565151 FN3KQ9H479 309 aa12.44□□□□□ -0.42
USB1-210ENST00000565151 DECR2Q9NUI1 292 aa12.44□□□□□ -0.42
USB1-210ENST00000565151 TAGLN3Q9UI15 199 aa12.44□□□□□ -0.42
USB1-210ENST00000565151 PURGQ9UJV8 347 aaKnown RBP12.44□□□□□ -0.42
USB1-210ENST00000565151 B9D1Q9UPM9 204 aa12.44□□□□□ -0.42
USB1-210ENST00000565151 GRIP1Q9Y3R0 1128 aa12.44□□□□□ -0.42
USB1-210ENST00000565151 OR6C68A6NDL8 312 aa12.43□□□□□ -0.42
USB1-210ENST00000565151 H3BSA7 217 aa12.43□□□□□ -0.42
USB1-210ENST00000565151 TPD52L2O43399 206 aaKnown RBP12.43□□□□□ -0.42
USB1-210ENST00000565151 GADD45GO95257 159 aa12.43□□□□□ -0.42
USB1-210ENST00000565151 HIST1H1CP16403 213 aaKnown RBP12.43□□□□□ -0.42
USB1-210ENST00000565151 HNF1AP20823 631 aa12.43□□□□□ -0.42
USB1-210ENST00000565151 KITLGP21583 273 aa12.43□□□□□ -0.42
USB1-210ENST00000565151 RRM2P31350 389 aa12.43□□□□□ -0.42
USB1-210ENST00000565151 SPIBQ01892 262 aa12.43□□□□□ -0.42
USB1-210ENST00000565151 SCRN3Q0VDG4 424 aa12.43□□□□□ -0.42
USB1-210ENST00000565151 HLXQ14774 488 aaPredicted RBP12.43□□□□□ -0.42
USB1-210ENST00000565151 KRTAP27-1Q3LI81 207 aa12.43□□□□□ -0.42
USB1-210ENST00000565151 MTX3Q5HYI7 312 aa12.43□□□□□ -0.42
USB1-210ENST00000565151 ZNF362Q5T0B9 420 aaPredicted RBP12.43□□□□□ -0.42
USB1-210ENST00000565151 GLCCI1Q86VQ1 547 aa12.43□□□□□ -0.42
USB1-210ENST00000565151 DEFB107AQ8IZN7 70 aa12.43□□□□□ -0.42
USB1-210ENST00000565151 OR1F12Q8NHA8 337 aa12.43□□□□□ -0.42
USB1-210ENST00000565151 CCL17Q92583 94 aa12.43□□□□□ -0.42
USB1-210ENST00000565151 ERMAPQ96PL5 475 aaPredicted RBP12.43□□□□□ -0.42
USB1-210ENST00000565151 NMNAT3Q96T66 252 aa12.43□□□□□ -0.42
USB1-210ENST00000565151 WACQ9BTA9 647 aa12.43□□□□□ -0.42
USB1-210ENST00000565151 TMPRSS13Q9BYE2 586 aa12.43□□□□□ -0.42
USB1-210ENST00000565151 OR52D1Q9H346 318 aa12.43□□□□□ -0.42
USB1-210ENST00000565151 SRA1Q9HD15 236 aaKnown RBP12.43□□□□□ -0.42
USB1-210ENST00000565151 IL1RAPQ9NPH3 570 aa12.43□□□□□ -0.42
USB1-210ENST00000565151 VNN3Q9NY84 501 aa12.43□□□□□ -0.42
USB1-210ENST00000565151 PLEK2Q9NYT0 353 aa12.43□□□□□ -0.42
USB1-210ENST00000565151 NDRG4Q9ULP0 352 aaKnown RBP12.43□□□□□ -0.42
USB1-210ENST00000565151 AURKCQ9UQB9 309 aa12.43□□□□□ -0.42
USB1-210ENST00000565151 ARL2BPQ9Y2Y0 163 aa12.43□□□□□ -0.42
USB1-210ENST00000565151 CLDN25C9JDP6 229 aa12.42□□□□□ -0.42
USB1-210ENST00000565151 ARPC3O15145 178 aa12.42□□□□□ -0.42
USB1-210ENST00000565151 VENTXO95231 258 aa12.42□□□□□ -0.42
USB1-210ENST00000565151 ITGA2P17301 1181 aa12.42□□□□□ -0.42
USB1-210ENST00000565151 FPR3P25089 353 aa12.42□□□□□ -0.42
USB1-210ENST00000565151 ZFP36P26651 326 aaKnown RBP12.42□□□□□ -0.42
USB1-210ENST00000565151 PRSS12P56730 875 aa12.42□□□□□ -0.42
USB1-210ENST00000565151 PPP1R8Q12972 351 aaKnown RBP12.42□□□□□ -0.42
USB1-210ENST00000565151 MOGQ16653 247 aa12.42□□□□□ -0.42
USB1-210ENST00000565151 SAMD4BQ5PRF9 694 aaKnown RBP12.42□□□□□ -0.42
USB1-210ENST00000565151 ZNF770Q6IQ21 691 aaPredicted RBP12.42□□□□□ -0.42
USB1-210ENST00000565151 C1orf94Q6P1W5 598 aa12.42□□□□□ -0.42
USB1-210ENST00000565151 PGBD2Q6P3X8 592 aa12.42□□□□□ -0.42
USB1-210ENST00000565151 CFAP77Q6ZQR2 320 aa12.42□□□□□ -0.42
USB1-210ENST00000565151 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.42□□□□□ -0.42
USB1-210ENST00000565151 ADCK1Q86TW2 530 aa12.42□□□□□ -0.42
USB1-210ENST00000565151 NAA40Q86UY6 237 aa12.42□□□□□ -0.42
USB1-210ENST00000565151 FITM2Q8N6M3 262 aa12.42□□□□□ -0.42
USB1-210ENST00000565151 SLC26A10Q8NG04 563 aa12.42□□□□□ -0.42
USB1-210ENST00000565151 OR4C15Q8NGM1 316 aa12.42□□□□□ -0.42
USB1-210ENST00000565151 OR4K13Q8NH42 304 aa12.42□□□□□ -0.42
USB1-210ENST00000565151 FANK1Q8TC84 345 aa12.42□□□□□ -0.42
USB1-210ENST00000565151 HAVCR1Q96D42 359 aa12.42□□□□□ -0.42
USB1-210ENST00000565151 ELMOD3Q96FG2 381 aa12.42□□□□□ -0.42
USB1-210ENST00000565151 NSMCE2Q96MF7 247 aa12.42□□□□□ -0.42
USB1-210ENST00000565151 SIGLEC11Q96RL6 698 aa12.42□□□□□ -0.42
USB1-210ENST00000565151 BTBD10Q9BSF8 475 aa12.42□□□□□ -0.42
USB1-210ENST00000565151 METTL17Q9H7H0 456 aaPredicted RBP12.42□□□□□ -0.42
USB1-210ENST00000565151 ELOVL3Q9HB03 270 aa12.42□□□□□ -0.42
USB1-210ENST00000565151 PNRC2Q9NPJ4 139 aaKnown RBP12.42□□□□□ -0.42
USB1-210ENST00000565151 MAGEL2Q9UJ55 1249 aa12.42□□□□□ -0.42
USB1-210ENST00000565151 LOC105371242A0A075B767 164 aa12.41□□□□□ -0.42
USB1-210ENST00000565151 TCRBV5S2A0A599 114 aa12.41□□□□□ -0.42
USB1-210ENST00000565151 PLSCR5A0PG75 271 aa12.41□□□□□ -0.42
USB1-210ENST00000565151 C5orf63A6NC05 138 aa12.41□□□□□ -0.42
USB1-210ENST00000565151 TIMM8AO60220 97 aaPredicted RBP12.41□□□□□ -0.42
USB1-210ENST00000565151 IGHV2-70P01814 119 aa12.41□□□□□ -0.42
USB1-210ENST00000565151 GGT2P36268 569 aa12.41□□□□□ -0.42
USB1-210ENST00000565151 SRP14P37108 136 aaKnown RBP12.41□□□□□ -0.42
USB1-210ENST00000565151 GUCA1AP43080 201 aaPredicted RBP12.41□□□□□ -0.42
USB1-210ENST00000565151 ARHGDIAP52565 204 aa12.41□□□□□ -0.42
USB1-210ENST00000565151 HMGA2P52926 109 aa12.41□□□□□ -0.42
USB1-210ENST00000565151 TEKQ02763 1124 aa12.41□□□□□ -0.42
USB1-210ENST00000565151 HFEQ30201 348 aa12.41□□□□□ -0.42
USB1-210ENST00000565151 SLC18B1Q6NT16 456 aa12.41□□□□□ -0.42
USB1-210ENST00000565151 ACSM5Q6NUN0 579 aa12.41□□□□□ -0.42
USB1-210ENST00000565151 LEG1Q6P5S2 330 aa12.41□□□□□ -0.42
USB1-210ENST00000565151 LYPD4Q6UWN0 246 aa12.41□□□□□ -0.42
USB1-210ENST00000565151 CYP2R1Q6VVX0 501 aa12.41□□□□□ -0.42
USB1-210ENST00000565151 ZNF620Q6ZNG0 422 aa12.41□□□□□ -0.42
USB1-210ENST00000565151 ZBTB46Q86UZ6 589 aa12.41□□□□□ -0.42
USB1-210ENST00000565151 LINC00346Q8IVM7 164 aa12.41□□□□□ -0.42
USB1-210ENST00000565151 ZDHHC21Q8IVQ6 265 aa12.41□□□□□ -0.42
USB1-210ENST00000565151 C1orf174Q8IYL3 243 aa12.41□□□□□ -0.42
USB1-210ENST00000565151 NPEPL1Q8NDH3 523 aa12.41□□□□□ -0.42
USB1-210ENST00000565151 SEMA6DQ8NFY4 1073 aa12.41□□□□□ -0.42
USB1-210ENST00000565151 OR9Q2Q8NGE9 314 aa12.41□□□□□ -0.42
USB1-210ENST00000565151 OR8D4Q8NGM9 314 aa12.41□□□□□ -0.42
USB1-210ENST00000565151 OR51F2Q8NH61 342 aa12.41□□□□□ -0.42
USB1-210ENST00000565151 ITLN1Q8WWA0 313 aa12.41□□□□□ -0.42
USB1-210ENST00000565151 PLA2G12AQ9BZM1 189 aa12.41□□□□□ -0.42
USB1-210ENST00000565151 EGLN3Q9H6Z9 239 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms